Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.48□□□□□ -2.17
Ssbp4Q3U4B1 Gm22148-201ENSMUST00000104445 107 ntBASIC1.48□□□□□ -2.17
Ssbp4Q3U4B1 Gm22556-201ENSMUST00000157803 100 ntBASIC1.48□□□□□ -2.17
Ssbp4Q3U4B1 Gm24572-201ENSMUST00000175505 88 ntBASIC1.48□□□□□ -2.17
Ssbp4Q3U4B1 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.48□□□□□ -2.17
Ssbp4Q3U4B1 Gm37693-201ENSMUST00000194562 234 ntBASIC1.48□□□□□ -2.17
Ssbp4Q3U4B1 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.48□□□□□ -2.17
Ssbp4Q3U4B1 Mir301b-201ENSMUST00000102333 97 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm25938-201ENSMUST00000104139 166 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm14674-201ENSMUST00000117816 342 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm25279-201ENSMUST00000122608 133 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm23172-201ENSMUST00000157160 124 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm22603-201ENSMUST00000157603 96 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm22557-201ENSMUST00000157804 102 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm22768-201ENSMUST00000158366 153 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm44922-201ENSMUST00000206690 90 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 AC101945.1-201ENSMUST00000226734 466 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.47□□□□□ -2.17
Ssbp4Q3U4B1 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Gm22279-201ENSMUST00000157200 93 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Gm24851-201ENSMUST00000158028 103 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Gm24001-201ENSMUST00000158463 85 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Gm26097-201ENSMUST00000179642 93 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Gm27898-201ENSMUST00000183987 80 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Gm44384-201ENSMUST00000200208 114 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 AC165138.1-201ENSMUST00000226984 270 ntBASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.46□□□□□ -2.18
Ssbp4Q3U4B1 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm22761-201ENSMUST00000102278 96 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm25377-201ENSMUST00000104334 129 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm24375-201ENSMUST00000104397 132 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm26018-201ENSMUST00000104406 128 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm13922-201ENSMUST00000119505 156 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm25884-201ENSMUST00000157782 62 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm26160-201ENSMUST00000158965 63 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm24656-201ENSMUST00000177548 132 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm24638-201ENSMUST00000179807 132 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm27544-201ENSMUST00000185069 155 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm44057-201ENSMUST00000204547 96 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Gm24038-201ENSMUST00000082872 159 ntBASIC1.45□□□□□ -2.18
Ssbp4Q3U4B1 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm24076-201ENSMUST00000158179 94 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm23350-201ENSMUST00000158429 103 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm23113-201ENSMUST00000158477 99 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm25716-201ENSMUST00000158628 104 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm24634-201ENSMUST00000158672 107 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm16546-201ENSMUST00000159442 355 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Mir6379-201ENSMUST00000183392 115 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Mir6388-201ENSMUST00000184417 75 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm43749-201ENSMUST00000199345 352 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm23370-201ENSMUST00000199545 130 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Gm24805-201ENSMUST00000082931 104 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Mir148b-201ENSMUST00000083626 97 ntBASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Olfr1253-204ENSMUST00000215988 6332 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Ssbp4Q3U4B1 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm23181-201ENSMUST00000158685 110 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm24668-201ENSMUST00000158935 104 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm20477-201ENSMUST00000174028 280 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Mir3086-201ENSMUST00000175072 87 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm29308-201ENSMUST00000188863 315 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm19855-201ENSMUST00000210145 249 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm25081-201ENSMUST00000082534 108 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm25357-201ENSMUST00000082745 72 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Mir186-201ENSMUST00000083497 71 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.43□□□□□ -2.18
Ssbp4Q3U4B1 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.42□□□□□ -2.18
Ssbp4Q3U4B1 Gm26403-201ENSMUST00000158500 105 ntBASIC1.42□□□□□ -2.18
Ssbp4Q3U4B1 Mir6350-201ENSMUST00000183639 105 ntBASIC1.42□□□□□ -2.18
Ssbp4Q3U4B1 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.42□□□□□ -2.18
Ssbp4Q3U4B1 Olfr1218-204ENSMUST00000215054 3875 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm26339-201ENSMUST00000102368 99 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm22477-201ENSMUST00000122569 316 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm22850-201ENSMUST00000157714 82 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Mir21b-201ENSMUST00000184317 108 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm38364-201ENSMUST00000191814 179 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm42719-201ENSMUST00000197393 355 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 Gm18213-201ENSMUST00000207850 178 ntBASIC1.41□□□□□ -2.18
Ssbp4Q3U4B1 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 142.4 ms