Protein–RNA interactions for Protein: P70390

Shox2, Short stature homeobox protein 2, mousemouse

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shox2P70390 Gm17528-201ENSMUST00000171026 239 ntBASIC0.34□□□□□ -2.36
Shox2P70390 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.34□□□□□ -2.36
Shox2P70390 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Sprr4-201ENSMUST00000062129 231 ntAPPRIS P1 BASIC0.34□□□□□ -2.36
Shox2P70390 Gm22294-201ENSMUST00000083308 104 ntBASIC0.34□□□□□ -2.36
Shox2P70390 Gm24468-201ENSMUST00000104489 104 ntBASIC0.33□□□□□ -2.36
Shox2P70390 Gm26303-201ENSMUST00000116845 119 ntBASIC0.33□□□□□ -2.36
Shox2P70390 Gm12225-201ENSMUST00000117995 298 ntBASIC0.33□□□□□ -2.36
Shox2P70390 Cfap61-214ENSMUST00000167179 183 ntBASIC0.33□□□□□ -2.36
Shox2P70390 Gm27289-201ENSMUST00000183341 82 ntBASIC0.33□□□□□ -2.36
Shox2P70390 Gm23142-201ENSMUST00000101848 105 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Gm26240-201ENSMUST00000101893 105 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Mir709-201ENSMUST00000102190 88 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Gm17132-201ENSMUST00000109542 1158 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Gm13711-201ENSMUST00000119708 453 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Gm26152-201ENSMUST00000157427 101 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Mir1951-201ENSMUST00000157981 89 ntBASIC0.32□□□□□ -2.36
Shox2P70390 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.32□□□□□ -2.36
Shox2P70390 Gm25596-201ENSMUST00000178368 107 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Gm44948-201ENSMUST00000209050 149 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Gm24150-201ENSMUST00000082759 104 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.32□□□□□ -2.36
Shox2P70390 Gm24164-201ENSMUST00000093663 104 ntBASIC0.32□□□□□ -2.36
Shox2P70390 Gm23528-201ENSMUST00000104571 132 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm14536-201ENSMUST00000118324 138 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm15027-201ENSMUST00000120922 138 ntBASIC0.31□□□□□ -2.36
Shox2P70390 n-R5s18-201ENSMUST00000122740 121 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm23148-201ENSMUST00000180367 107 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm43884-201ENSMUST00000204251 559 ntBASIC0.31□□□□□ -2.36
Shox2P70390 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm25204-201ENSMUST00000082843 106 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm25258-201ENSMUST00000083049 107 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm23969-201ENSMUST00000083324 74 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm23039-201ENSMUST00000083870 161 ntBASIC0.31□□□□□ -2.36
Shox2P70390 Gm26329-201ENSMUST00000093723 110 ntBASIC0.31□□□□□ -2.36
Shox2P70390 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.3□□□□□ -2.36
Shox2P70390 Gm24116-201ENSMUST00000103975 107 ntBASIC0.3□□□□□ -2.36
Shox2P70390 Gm13560-201ENSMUST00000121865 329 ntBASIC0.3□□□□□ -2.36
Shox2P70390 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
Shox2P70390 Gm24440-201ENSMUST00000157236 63 ntBASIC0.3□□□□□ -2.36
Shox2P70390 Gm26022-201ENSMUST00000158663 108 ntBASIC0.3□□□□□ -2.36
Shox2P70390 Gm24512-201ENSMUST00000174963 65 ntBASIC0.3□□□□□ -2.36
Shox2P70390 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.3□□□□□ -2.36
Shox2P70390 Gm23625-201ENSMUST00000082457 100 ntBASIC0.3□□□□□ -2.36
Shox2P70390 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
Shox2P70390 Gm25393-201ENSMUST00000157336 285 ntBASIC0.29□□□□□ -2.36
Shox2P70390 Scarna8-201ENSMUST00000158333 131 ntBASIC0.29□□□□□ -2.36
Shox2P70390 Gm23194-201ENSMUST00000158813 105 ntBASIC0.29□□□□□ -2.36
Shox2P70390 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.29□□□□□ -2.36
Shox2P70390 Gm27735-201ENSMUST00000185085 76 ntBASIC0.29□□□□□ -2.36
Shox2P70390 Gm28256-201ENSMUST00000188953 139 ntBASIC0.29□□□□□ -2.36
Shox2P70390 Gm28559-201ENSMUST00000190532 139 ntBASIC0.29□□□□□ -2.36
Shox2P70390 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC0.29□□□□□ -2.36
Shox2P70390 Gm24091-201ENSMUST00000082550 83 ntBASIC0.29□□□□□ -2.36
Shox2P70390 Gm23711-201ENSMUST00000083856 83 ntBASIC0.29□□□□□ -2.36
Shox2P70390 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0.28□□□□□ -2.36
Shox2P70390 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC0.28□□□□□ -2.36
Shox2P70390 Gm6105-201ENSMUST00000200580 624 ntBASIC0.28□□□□□ -2.36
Shox2P70390 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.28□□□□□ -2.36
Shox2P70390 Gm22248-201ENSMUST00000082482 150 ntBASIC0.28□□□□□ -2.36
Shox2P70390 Gm24527-201ENSMUST00000082920 107 ntBASIC0.28□□□□□ -2.36
Shox2P70390 Gm26326-201ENSMUST00000083070 129 ntBASIC0.28□□□□□ -2.36
Shox2P70390 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.27□□□□□ -2.37
Shox2P70390 Gm25847-201ENSMUST00000116793 96 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm16186-201ENSMUST00000120132 216 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm24595-201ENSMUST00000122501 110 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm22598-201ENSMUST00000157600 127 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm24903-201ENSMUST00000158131 126 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm23024-201ENSMUST00000158770 292 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm27943-201ENSMUST00000184844 116 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm44488-201ENSMUST00000199467 119 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm44811-201ENSMUST00000209120 228 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm45508-201ENSMUST00000209298 299 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm22283-201ENSMUST00000082556 161 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm25855-201ENSMUST00000082787 72 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm24616-201ENSMUST00000083274 139 ntBASIC0.27□□□□□ -2.37
Shox2P70390 Gm23492-201ENSMUST00000116837 115 ntBASIC0.26□□□□□ -2.37
Shox2P70390 Gm23335-201ENSMUST00000117021 90 ntBASIC0.26□□□□□ -2.37
Shox2P70390 Gm23665-201ENSMUST00000158054 62 ntBASIC0.26□□□□□ -2.37
Shox2P70390 Gm23113-201ENSMUST00000158477 99 ntBASIC0.26□□□□□ -2.37
Shox2P70390 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.26□□□□□ -2.37
Shox2P70390 Mir7661-201ENSMUST00000197023 61 ntBASIC0.26□□□□□ -2.37
Shox2P70390 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.26□□□□□ -2.37
Shox2P70390 Gm24042-201ENSMUST00000083114 103 ntBASIC0.26□□□□□ -2.37
Shox2P70390 Mir500-201ENSMUST00000093600 92 ntBASIC0.26□□□□□ -2.37
Shox2P70390 Mir670-201ENSMUST00000102380 100 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm24909-201ENSMUST00000157290 280 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm22883-201ENSMUST00000157376 106 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm22706-201ENSMUST00000157907 112 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm24847-201ENSMUST00000158032 108 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm24296-201ENSMUST00000158297 106 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm23759-201ENSMUST00000158351 268 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm23853-201ENSMUST00000158375 104 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm24880-201ENSMUST00000158776 85 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm16539-201ENSMUST00000160086 327 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.25□□□□□ -2.37
Shox2P70390 Gm36946-201ENSMUST00000192706 435 ntBASIC0.25□□□□□ -2.37
Shox2P70390 Gm42988-201ENSMUST00000198116 225 ntBASIC0.25□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 164.3 ms