Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm23390-201ENSMUST00000157393 106 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm28020-201ENSMUST00000157739 67 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm22097-201ENSMUST00000157929 278 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm25375-201ENSMUST00000158157 135 ntBASIC1.63□□□□□ -2.15
NcanP55066 Mir5124a-201ENSMUST00000175528 72 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm23864-201ENSMUST00000177607 107 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm27476-201ENSMUST00000183366 104 ntBASIC1.63□□□□□ -2.15
NcanP55066 Mir6388-201ENSMUST00000184417 75 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm37746-201ENSMUST00000193249 198 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm45508-201ENSMUST00000209298 299 ntBASIC1.63□□□□□ -2.15
NcanP55066 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.63□□□□□ -2.15
NcanP55066 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.63□□□□□ -2.15
NcanP55066 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.63□□□□□ -2.15
NcanP55066 Olfr1100-202ENSMUST00000117211 2937 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
NcanP55066 Mir873a-201ENSMUST00000104863 77 ntBASIC1.62□□□□□ -2.15
NcanP55066 Gm6897-201ENSMUST00000117714 138 ntBASIC1.62□□□□□ -2.15
NcanP55066 Gm14838-201ENSMUST00000118913 248 ntBASIC1.62□□□□□ -2.15
NcanP55066 Gm14758-201ENSMUST00000119104 138 ntBASIC1.62□□□□□ -2.15
NcanP55066 Gm43563-201ENSMUST00000196761 198 ntBASIC1.62□□□□□ -2.15
NcanP55066 Gm20005-201ENSMUST00000202583 299 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
NcanP55066 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.62□□□□□ -2.15
NcanP55066 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.62□□□□□ -2.15
NcanP55066 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC1.61□□□□□ -2.15
NcanP55066 Gm23466-201ENSMUST00000157133 106 ntBASIC1.61□□□□□ -2.15
NcanP55066 Mir7663-201ENSMUST00000183950 61 ntBASIC1.61□□□□□ -2.15
NcanP55066 Gm44563-201ENSMUST00000207958 178 ntBASIC1.61□□□□□ -2.15
NcanP55066 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.61□□□□□ -2.15
NcanP55066 Gm22248-201ENSMUST00000082482 150 ntBASIC1.61□□□□□ -2.15
NcanP55066 Gm25204-201ENSMUST00000082843 106 ntBASIC1.61□□□□□ -2.15
NcanP55066 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.61□□□□□ -2.15
NcanP55066 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
NcanP55066 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.6□□□□□ -2.15
NcanP55066 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
NcanP55066 Gm25015-201ENSMUST00000158400 128 ntBASIC1.6□□□□□ -2.15
NcanP55066 Gm25654-201ENSMUST00000158467 88 ntBASIC1.6□□□□□ -2.15
NcanP55066 Snord87-201ENSMUST00000175437 87 ntBASIC1.6□□□□□ -2.15
NcanP55066 Mir6379-201ENSMUST00000183392 115 ntBASIC1.6□□□□□ -2.15
NcanP55066 Gm28912-201ENSMUST00000189001 234 ntBASIC1.6□□□□□ -2.15
NcanP55066 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1.6□□□□□ -2.15
NcanP55066 AC165293.1-201ENSMUST00000219669 329 ntBASIC1.6□□□□□ -2.15
NcanP55066 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.6□□□□□ -2.15
NcanP55066 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
NcanP55066 Gm22744-201ENSMUST00000083444 65 ntBASIC1.6□□□□□ -2.15
NcanP55066 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.6□□□□□ -2.15
NcanP55066 Mir669f-201ENSMUST00000103850 121 ntBASIC1.59□□□□□ -2.15
NcanP55066 Snord19-201ENSMUST00000104609 76 ntBASIC1.59□□□□□ -2.15
NcanP55066 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.59□□□□□ -2.15
NcanP55066 Gm23545-201ENSMUST00000158205 104 ntBASIC1.59□□□□□ -2.15
NcanP55066 Gm24772-201ENSMUST00000158507 110 ntBASIC1.59□□□□□ -2.15
NcanP55066 Gm23181-201ENSMUST00000158685 110 ntBASIC1.59□□□□□ -2.15
NcanP55066 Gm24222-201ENSMUST00000158834 93 ntBASIC1.59□□□□□ -2.15
NcanP55066 Gm17113-201ENSMUST00000170118 171 ntBASIC1.59□□□□□ -2.15
NcanP55066 Snora19-201ENSMUST00000082962 132 ntBASIC1.59□□□□□ -2.15
NcanP55066 Gm22169-201ENSMUST00000083229 107 ntBASIC1.59□□□□□ -2.15
NcanP55066 Gm23658-201ENSMUST00000083233 132 ntBASIC1.59□□□□□ -2.15
NcanP55066 Gm10360-201ENSMUST00000097219 272 ntBASIC1.59□□□□□ -2.15
NcanP55066 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.59□□□□□ -2.16
NcanP55066 Gm25506-201ENSMUST00000104339 70 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm15861-201ENSMUST00000120979 339 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm14491-201ENSMUST00000121919 199 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm11204-201ENSMUST00000122438 147 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm24594-201ENSMUST00000122502 99 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm25783-201ENSMUST00000122525 190 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm22217-201ENSMUST00000157556 313 ntBASIC1.58□□□□□ -2.16
NcanP55066 Mir1967-201ENSMUST00000157789 82 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm23180-201ENSMUST00000158686 125 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm24174-201ENSMUST00000158933 111 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm2077-201ENSMUST00000195017 319 ntBASIC1.58□□□□□ -2.16
NcanP55066 Mir219b-201ENSMUST00000198317 65 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.58□□□□□ -2.16
NcanP55066 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC1.58□□□□□ -2.16
NcanP55066 Gm25401-201ENSMUST00000082975 106 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm24457-201ENSMUST00000083196 105 ntBASIC1.58□□□□□ -2.16
NcanP55066 Gm24942-201ENSMUST00000158328 114 ntBASIC1.57□□□□□ -2.16
NcanP55066 Mir6904-201ENSMUST00000183443 67 ntBASIC1.57□□□□□ -2.16
NcanP55066 Gm27803-201ENSMUST00000183763 119 ntBASIC1.57□□□□□ -2.16
NcanP55066 Gm37693-201ENSMUST00000194562 234 ntBASIC1.57□□□□□ -2.16
NcanP55066 Gm26225-201ENSMUST00000082508 135 ntBASIC1.57□□□□□ -2.16
NcanP55066 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
NcanP55066 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
NcanP55066 Mir466h-201ENSMUST00000104748 81 ntBASIC1.56□□□□□ -2.16
NcanP55066 Gm26026-201ENSMUST00000122726 123 ntBASIC1.56□□□□□ -2.16
NcanP55066 Gm23172-201ENSMUST00000157160 124 ntBASIC1.56□□□□□ -2.16
NcanP55066 Gm22603-201ENSMUST00000157603 96 ntBASIC1.56□□□□□ -2.16
NcanP55066 Gm25914-201ENSMUST00000157618 153 ntBASIC1.56□□□□□ -2.16
NcanP55066 Mir1951-201ENSMUST00000157981 89 ntBASIC1.56□□□□□ -2.16
NcanP55066 Gm26022-201ENSMUST00000158663 108 ntBASIC1.56□□□□□ -2.16
NcanP55066 Gm27585-201ENSMUST00000183717 199 ntBASIC1.56□□□□□ -2.16
NcanP55066 Mir7683-201ENSMUST00000183842 61 ntBASIC1.56□□□□□ -2.16
NcanP55066 Mir7063-201ENSMUST00000184158 91 ntBASIC1.56□□□□□ -2.16
NcanP55066 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.56□□□□□ -2.16
NcanP55066 Gm23370-201ENSMUST00000199545 130 ntBASIC1.56□□□□□ -2.16
NcanP55066 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.56□□□□□ -2.16
NcanP55066 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.56□□□□□ -2.16
NcanP55066 Mir141-201ENSMUST00000083540 72 ntBASIC1.56□□□□□ -2.16
NcanP55066 Gm25513-201ENSMUST00000083861 162 ntBASIC1.56□□□□□ -2.16
NcanP55066 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
NcanP55066 Gm14937-201ENSMUST00000119709 208 ntBASIC1.55□□□□□ -2.16
NcanP55066 Gm23656-201ENSMUST00000122626 112 ntBASIC1.55□□□□□ -2.16
NcanP55066 Gm26279-201ENSMUST00000157095 102 ntBASIC1.55□□□□□ -2.16
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms