Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Mir543-201ENSMUST00000102286 76 ntBASIC-1.15□□□□□ -2.59
HttP42859 Gm14626-201ENSMUST00000117619 216 ntBASIC-1.15□□□□□ -2.59
HttP42859 AC154484.1-201ENSMUST00000227311 771 ntBASIC-1.15□□□□□ -2.59
HttP42859 Mir325-201ENSMUST00000083491 98 ntBASIC-1.15□□□□□ -2.59
HttP42859 Gm23042-201ENSMUST00000083866 101 ntBASIC-1.15□□□□□ -2.59
HttP42859 Gm23898-201ENSMUST00000158111 103 ntBASIC-1.16□□□□□ -2.59
HttP42859 Gm22888-201ENSMUST00000158640 77 ntBASIC-1.16□□□□□ -2.59
HttP42859 Gm20543-201ENSMUST00000174200 726 ntBASIC-1.16□□□□□ -2.59
HttP42859 Mir6377-201ENSMUST00000183760 114 ntBASIC-1.16□□□□□ -2.59
HttP42859 Gm9227-201ENSMUST00000194733 566 ntBASIC-1.16□□□□□ -2.59
HttP42859 Gm42622-201ENSMUST00000197229 355 ntBASIC-1.16□□□□□ -2.59
HttP42859 Gm25513-201ENSMUST00000083861 162 ntBASIC-1.16□□□□□ -2.59
HttP42859 Gm22831-201ENSMUST00000102473 109 ntBASIC-1.17□□□□□ -2.6
HttP42859 Mir804-201ENSMUST00000103251 95 ntBASIC-1.17□□□□□ -2.6
HttP42859 Gm23792-201ENSMUST00000122557 93 ntBASIC-1.17□□□□□ -2.6
HttP42859 AC123656.2-201ENSMUST00000226726 227 ntBASIC-1.17□□□□□ -2.6
HttP42859 Gm37630-201ENSMUST00000194210 1456 ntBASIC-1.17□□□□□ -2.6
HttP42859 Gm24875-201ENSMUST00000158888 104 ntBASIC-1.17□□□□□ -2.6
HttP42859 1700022E09Rik-202ENSMUST00000188342 387 ntTSL 1 (best) BASIC-1.17□□□□□ -2.6
HttP42859 Gm25756-201ENSMUST00000103990 136 ntBASIC-1.18□□□□□ -2.6
HttP42859 Sval2-202ENSMUST00000119995 463 ntTSL 3 BASIC-1.18□□□□□ -2.6
HttP42859 Gm26870-201ENSMUST00000181242 1170 ntTSL 5 BASIC-1.18□□□□□ -2.6
HttP42859 Mir351-201ENSMUST00000083569 99 ntBASIC-1.18□□□□□ -2.6
HttP42859 Gm23431-201ENSMUST00000104006 107 ntBASIC-1.18□□□□□ -2.6
HttP42859 Gm25622-201ENSMUST00000157217 104 ntBASIC-1.18□□□□□ -2.6
HttP42859 Gm37338-201ENSMUST00000191986 127 ntBASIC-1.18□□□□□ -2.6
HttP42859 Gm22974-201ENSMUST00000083301 103 ntBASIC-1.18□□□□□ -2.6
HttP42859 Gm13475-201ENSMUST00000119290 234 ntBASIC-1.19□□□□□ -2.6
HttP42859 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-1.19□□□□□ -2.6
HttP42859 Gm25797-201ENSMUST00000082640 107 ntBASIC-1.19□□□□□ -2.6
HttP42859 Gm24043-201ENSMUST00000083108 116 ntBASIC-1.19□□□□□ -2.6
HttP42859 Gm25088-201ENSMUST00000101803 79 ntBASIC-1.19□□□□□ -2.6
HttP42859 Gm25610-201ENSMUST00000104016 129 ntBASIC-1.19□□□□□ -2.6
HttP42859 Gm24892-201ENSMUST00000122747 104 ntBASIC-1.19□□□□□ -2.6
HttP42859 Gm45508-201ENSMUST00000209298 299 ntBASIC-1.19□□□□□ -2.6
HttP42859 Defb38-201ENSMUST00000066416 286 ntAPPRIS P1 TSL 1 (best) BASIC-1.19□□□□□ -2.6
HttP42859 Mir19a-201ENSMUST00000083482 82 ntBASIC-1.19□□□□□ -2.6
HttP42859 Gm24277-201ENSMUST00000158661 104 ntBASIC-1.2□□□□□ -2.6
HttP42859 Mir7094-2-201ENSMUST00000184622 60 ntBASIC-1.2□□□□□ -2.6
HttP42859 Gm44324-201ENSMUST00000198517 135 ntBASIC-1.2□□□□□ -2.6
HttP42859 Mir7094-1-201ENSMUST00000199671 60 ntBASIC-1.2□□□□□ -2.6
HttP42859 Gm23535-201ENSMUST00000157542 106 ntBASIC-1.2□□□□□ -2.6
HttP42859 Gm23892-201ENSMUST00000158105 130 ntBASIC-1.2□□□□□ -2.6
HttP42859 Gm23068-201ENSMUST00000158239 293 ntBASIC-1.2□□□□□ -2.6
HttP42859 Gm23633-201ENSMUST00000175293 119 ntBASIC-1.2□□□□□ -2.6
HttP42859 Gm44325-201ENSMUST00000196757 77 ntBASIC-1.2□□□□□ -2.6
HttP42859 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC-1.2□□□□□ -2.6
HttP42859 1700011B04Rik-211ENSMUST00000222690 394 ntTSL 5 BASIC-1.2□□□□□ -2.6
HttP42859 Gm22435-201ENSMUST00000158552 128 ntBASIC-1.21□□□□□ -2.6
HttP42859 Gm26217-201ENSMUST00000175212 84 ntBASIC-1.21□□□□□ -2.6
HttP42859 Snord42b-201ENSMUST00000083742 69 ntBASIC-1.21□□□□□ -2.6
HttP42859 Gm24232-201ENSMUST00000104314 132 ntBASIC-1.21□□□□□ -2.6
HttP42859 Gm10717-206ENSMUST00000177875 675 ntTSL 5 BASIC-1.21□□□□□ -2.6
HttP42859 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC-1.21□□□□□ -2.6
HttP42859 Gm26384-201ENSMUST00000102183 110 ntBASIC-1.22□□□□□ -2.6
HttP42859 Gm14906-201ENSMUST00000119265 390 ntBASIC-1.22□□□□□ -2.6
HttP42859 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC-1.22□□□□□ -2.6
HttP42859 Gm36953-201ENSMUST00000195295 268 ntBASIC-1.22□□□□□ -2.6
HttP42859 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC-1.22□□□□□ -2.6
HttP42859 Gm14919-201ENSMUST00000120839 390 ntBASIC-1.22□□□□□ -2.61
HttP42859 Gm23715-201ENSMUST00000157354 106 ntBASIC-1.22□□□□□ -2.61
HttP42859 Gm18667-201ENSMUST00000186523 484 ntBASIC-1.22□□□□□ -2.61
HttP42859 Gm37624-201ENSMUST00000193751 219 ntBASIC-1.22□□□□□ -2.61
HttP42859 Gm44865-201ENSMUST00000207240 531 ntBASIC-1.22□□□□□ -2.61
HttP42859 Gm25855-201ENSMUST00000082787 72 ntBASIC-1.22□□□□□ -2.61
HttP42859 Gm24580-201ENSMUST00000103965 131 ntBASIC-1.23□□□□□ -2.61
HttP42859 Gm26249-201ENSMUST00000116708 118 ntBASIC-1.23□□□□□ -2.61
HttP42859 Gm10548-202ENSMUST00000165672 272 ntBASIC-1.23□□□□□ -2.61
HttP42859 Mir1264-201ENSMUST00000175381 86 ntBASIC-1.23□□□□□ -2.61
HttP42859 Gm25126-201ENSMUST00000083343 102 ntBASIC-1.23□□□□□ -2.61
HttP42859 Gm25626-201ENSMUST00000177631 107 ntBASIC-1.23□□□□□ -2.61
HttP42859 AC144733.1-201ENSMUST00000222893 1289 ntBASIC-1.23□□□□□ -2.61
HttP42859 AC122341.1-201ENSMUST00000227291 560 ntBASIC-1.23□□□□□ -2.61
HttP42859 Mir547-201ENSMUST00000102051 78 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm25898-201ENSMUST00000158303 106 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm22183-201ENSMUST00000175420 73 ntBASIC-1.24□□□□□ -2.61
HttP42859 AC150901.1-201ENSMUST00000208407 145 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm23454-201ENSMUST00000083332 133 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm25213-201ENSMUST00000102388 113 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm14536-201ENSMUST00000118324 138 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm15027-201ENSMUST00000120922 138 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm21726-201ENSMUST00000179654 392 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm44352-201ENSMUST00000196358 110 ntBASIC-1.24□□□□□ -2.61
HttP42859 AC167977.2-201ENSMUST00000225676 682 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm25225-201ENSMUST00000158197 102 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm23453-201ENSMUST00000083326 106 ntBASIC-1.24□□□□□ -2.61
HttP42859 Gm22281-201ENSMUST00000157198 103 ntBASIC-1.25□□□□□ -2.61
HttP42859 Gm18185-201ENSMUST00000186725 667 ntBASIC-1.25□□□□□ -2.61
HttP42859 AC153541.1-201ENSMUST00000213786 294 ntBASIC-1.25□□□□□ -2.61
HttP42859 Gm22085-201ENSMUST00000158344 110 ntBASIC-1.25□□□□□ -2.61
HttP42859 Olfr833-ps1-201ENSMUST00000086493 913 ntBASIC-1.25□□□□□ -2.61
HttP42859 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC-1.25□□□□□ -2.61
HttP42859 1700129C05Rik-203ENSMUST00000162271 325 ntAPPRIS ALT2 TSL 3 BASIC-1.26□□□□□ -2.61
HttP42859 Gm37918-201ENSMUST00000192071 120 ntBASIC-1.26□□□□□ -2.61
HttP42859 Gm10720-201ENSMUST00000099050 669 ntAPPRIS P1 TSL 5 BASIC-1.26□□□□□ -2.61
HttP42859 Trbv21-201ENSMUST00000103278 290 ntAPPRIS P1 BASIC-1.26□□□□□ -2.61
HttP42859 Mir1191-201ENSMUST00000116883 120 ntBASIC-1.26□□□□□ -2.61
HttP42859 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC-1.26□□□□□ -2.61
HttP42859 Gm42773-201ENSMUST00000196962 148 ntBASIC-1.26□□□□□ -2.61
HttP42859 AC125311.1-201ENSMUST00000226950 220 ntBASIC-1.26□□□□□ -2.61
Retrieved 100 of 76,532 protein–RNA pairs in 154.6 ms