Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm24020-201ENSMUST00000180156 108 ntBASIC1.18□□□□□ -2.22
Traf1P39428 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.18□□□□□ -2.22
Traf1P39428 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.17□□□□□ -2.22
Traf1P39428 Gm13711-201ENSMUST00000119708 453 ntBASIC1.17□□□□□ -2.22
Traf1P39428 Gm13339-201ENSMUST00000120651 510 ntBASIC1.17□□□□□ -2.22
Traf1P39428 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.17□□□□□ -2.22
Traf1P39428 Gm25011-201ENSMUST00000158398 126 ntBASIC1.17□□□□□ -2.22
Traf1P39428 Gm38274-201ENSMUST00000195689 148 ntBASIC1.17□□□□□ -2.22
Traf1P39428 AC158981.3-202ENSMUST00000228906 523 ntBASIC1.17□□□□□ -2.22
Traf1P39428 Gm22704-201ENSMUST00000083027 137 ntBASIC1.17□□□□□ -2.22
Traf1P39428 Gm22479-201ENSMUST00000122566 81 ntBASIC1.16□□□□□ -2.22
Traf1P39428 Gm22888-201ENSMUST00000158640 77 ntBASIC1.16□□□□□ -2.22
Traf1P39428 Gm20391-201ENSMUST00000174722 106 ntBASIC1.16□□□□□ -2.22
Traf1P39428 Gm25170-201ENSMUST00000104191 129 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm24909-201ENSMUST00000157290 280 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm22450-201ENSMUST00000179641 107 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm25473-201ENSMUST00000180191 107 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm43563-201ENSMUST00000196761 198 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm45268-201ENSMUST00000210046 370 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm45673-201ENSMUST00000210293 358 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm25851-201ENSMUST00000082794 107 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm24856-201ENSMUST00000082809 107 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm26071-201ENSMUST00000083261 107 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Mir22-201ENSMUST00000083595 95 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm24764-201ENSMUST00000083686 199 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm24521-201ENSMUST00000083958 107 ntBASIC1.15□□□□□ -2.23
Traf1P39428 Gm22003-201ENSMUST00000101885 107 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm22216-201ENSMUST00000157557 114 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Mir1931-201ENSMUST00000158589 119 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm23340-201ENSMUST00000158955 123 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Vmn1r-ps69-201ENSMUST00000172759 201 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm23410-201ENSMUST00000179967 107 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm22756-201ENSMUST00000180118 107 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm44396-201ENSMUST00000199843 114 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm45313-201ENSMUST00000210584 178 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm22505-201ENSMUST00000082956 108 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm22363-201ENSMUST00000083100 108 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm23814-201ENSMUST00000083230 102 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm23095-201ENSMUST00000083446 107 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm23345-201ENSMUST00000083817 150 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Gm10222-201ENSMUST00000088336 294 ntBASIC1.14□□□□□ -2.23
Traf1P39428 Traj45-201ENSMUST00000103697 63 ntAPPRIS P1 BASIC1.13□□□□□ -2.23
Traf1P39428 Gm24431-201ENSMUST00000104073 66 ntBASIC1.13□□□□□ -2.23
Traf1P39428 Gm25506-201ENSMUST00000104339 70 ntBASIC1.13□□□□□ -2.23
Traf1P39428 Gm22149-201ENSMUST00000104442 136 ntBASIC1.13□□□□□ -2.23
Traf1P39428 Mir880-201ENSMUST00000104809 78 ntBASIC1.13□□□□□ -2.23
Traf1P39428 Snora19-201ENSMUST00000082962 132 ntBASIC1.13□□□□□ -2.23
Traf1P39428 Gm23658-201ENSMUST00000083233 132 ntBASIC1.13□□□□□ -2.23
Traf1P39428 Mir27b-201ENSMUST00000083541 73 ntBASIC1.13□□□□□ -2.23
Traf1P39428 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.13□□□□□ -2.23
Traf1P39428 AC127302.3-201ENSMUST00000215480 2791 ntBASIC1.13□□□□□ -2.23
Traf1P39428 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC1.12□□□□□ -2.23
Traf1P39428 Gm22515-201ENSMUST00000158273 305 ntBASIC1.12□□□□□ -2.23
Traf1P39428 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.12□□□□□ -2.23
Traf1P39428 Mir7663-201ENSMUST00000183950 61 ntBASIC1.12□□□□□ -2.23
Traf1P39428 Mir6540-201ENSMUST00000184886 108 ntBASIC1.12□□□□□ -2.23
Traf1P39428 Gm29140-201ENSMUST00000190187 476 ntBASIC1.12□□□□□ -2.23
Traf1P39428 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC1.12□□□□□ -2.23
Traf1P39428 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.12□□□□□ -2.23
Traf1P39428 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.11□□□□□ -2.23
Traf1P39428 Snord71-201ENSMUST00000104361 85 ntBASIC1.11□□□□□ -2.23
Traf1P39428 Gm14568-201ENSMUST00000119321 294 ntBASIC1.11□□□□□ -2.23
Traf1P39428 Gm13801-201ENSMUST00000120750 160 ntBASIC1.11□□□□□ -2.23
Traf1P39428 Gm24401-201ENSMUST00000157868 91 ntBASIC1.11□□□□□ -2.23
Traf1P39428 Gm27668-201ENSMUST00000184188 120 ntBASIC1.11□□□□□ -2.23
Traf1P39428 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.11□□□□□ -2.23
Traf1P39428 Gm45508-201ENSMUST00000209298 299 ntBASIC1.11□□□□□ -2.23
Traf1P39428 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.11□□□□□ -2.23
Traf1P39428 Mir181a-2-201ENSMUST00000083489 76 ntBASIC1.11□□□□□ -2.23
Traf1P39428 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Traf1P39428 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.1□□□□□ -2.23
Traf1P39428 Gm25783-201ENSMUST00000122525 190 ntBASIC1.1□□□□□ -2.23
Traf1P39428 Gm25558-201ENSMUST00000158083 106 ntBASIC1.1□□□□□ -2.23
Traf1P39428 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Traf1P39428 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.1□□□□□ -2.23
Traf1P39428 Gm44052-201ENSMUST00000203382 396 ntBASIC1.1□□□□□ -2.23
Traf1P39428 Gm44057-201ENSMUST00000204547 96 ntBASIC1.1□□□□□ -2.23
Traf1P39428 Gm44921-201ENSMUST00000205290 301 ntBASIC1.1□□□□□ -2.23
Traf1P39428 Gm25855-201ENSMUST00000082787 72 ntBASIC1.1□□□□□ -2.23
Traf1P39428 Gm25664-201ENSMUST00000157697 107 ntBASIC1.09□□□□□ -2.23
Traf1P39428 Gm22553-201ENSMUST00000157797 295 ntBASIC1.09□□□□□ -2.23
Traf1P39428 Mir6380-201ENSMUST00000184334 81 ntBASIC1.09□□□□□ -2.23
Traf1P39428 AC125374.2-201ENSMUST00000214278 162 ntBASIC1.09□□□□□ -2.23
Traf1P39428 Gm22571-201ENSMUST00000082984 70 ntBASIC1.09□□□□□ -2.23
Traf1P39428 Snord35a-201ENSMUST00000083884 90 ntBASIC1.09□□□□□ -2.23
Traf1P39428 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.09□□□□□ -2.24
Traf1P39428 Gm22914-201ENSMUST00000175195 77 ntBASIC1.08□□□□□ -2.24
Traf1P39428 Gm38183-201ENSMUST00000193189 205 ntBASIC1.08□□□□□ -2.24
Traf1P39428 Gm44301-201ENSMUST00000200362 143 ntBASIC1.08□□□□□ -2.24
Traf1P39428 Gm19572-201ENSMUST00000214326 338 ntBASIC1.08□□□□□ -2.24
Traf1P39428 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC1.07□□□□□ -2.24
Traf1P39428 Gm22784-201ENSMUST00000104088 132 ntBASIC1.07□□□□□ -2.24
Traf1P39428 Mir875-201ENSMUST00000104698 78 ntBASIC1.07□□□□□ -2.24
Traf1P39428 Gm11904-201ENSMUST00000120562 248 ntBASIC1.07□□□□□ -2.24
Traf1P39428 Gm26287-201ENSMUST00000158887 81 ntBASIC1.07□□□□□ -2.24
Traf1P39428 Gm25024-201ENSMUST00000179667 104 ntBASIC1.07□□□□□ -2.24
Traf1P39428 Gm27974-201ENSMUST00000183415 105 ntBASIC1.07□□□□□ -2.24
Traf1P39428 Gm28344-201ENSMUST00000185704 279 ntBASIC1.07□□□□□ -2.24
Traf1P39428 Mir448-201ENSMUST00000083516 112 ntBASIC1.07□□□□□ -2.24
Traf1P39428 Gm25538-201ENSMUST00000101943 107 ntBASIC1.06□□□□□ -2.24
Retrieved 100 of 76,532 protein–RNA pairs in 151.8 ms