Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm27991-201ENSMUST00000184804 137 ntBASIC2.89□□□□□ -1.95
RaraP11416 Gm9156-201ENSMUST00000189660 463 ntBASIC2.89□□□□□ -1.95
RaraP11416 Mir34a-201ENSMUST00000083559 102 ntBASIC2.89□□□□□ -1.95
RaraP11416 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
RaraP11416 Gm10730-201ENSMUST00000194097 2723 ntBASIC2.89□□□□□ -1.95
RaraP11416 Olfr1256-204ENSMUST00000215613 4543 ntAPPRIS P1 TSL 3 BASIC2.89□□□□□ -1.95
RaraP11416 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.88□□□□□ -1.95
RaraP11416 Stap1-206ENSMUST00000198435 3350 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
RaraP11416 Gm25539-201ENSMUST00000116886 122 ntBASIC2.88□□□□□ -1.95
RaraP11416 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.88□□□□□ -1.95
RaraP11416 Gm26104-201ENSMUST00000157250 108 ntBASIC2.88□□□□□ -1.95
RaraP11416 Gm24572-201ENSMUST00000175505 88 ntBASIC2.88□□□□□ -1.95
RaraP11416 Gm45386-201ENSMUST00000210194 218 ntBASIC2.88□□□□□ -1.95
RaraP11416 Mir29c-201ENSMUST00000083614 88 ntBASIC2.88□□□□□ -1.95
RaraP11416 Vmn1r29-204ENSMUST00000228038 4520 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
RaraP11416 Gm23652-201ENSMUST00000116752 107 ntBASIC2.87□□□□□ -1.95
RaraP11416 Gm14937-201ENSMUST00000119709 208 ntBASIC2.87□□□□□ -1.95
RaraP11416 Gm25884-201ENSMUST00000157782 62 ntBASIC2.87□□□□□ -1.95
RaraP11416 Gm24436-201ENSMUST00000157889 302 ntBASIC2.87□□□□□ -1.95
RaraP11416 Mir3094-201ENSMUST00000175121 64 ntBASIC2.87□□□□□ -1.95
RaraP11416 Trbv7-201ENSMUST00000193339 402 ntBASIC2.87□□□□□ -1.95
RaraP11416 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.87□□□□□ -1.95
RaraP11416 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.87□□□□□ -1.95
RaraP11416 Gm1980-201ENSMUST00000123131 2306 ntBASIC2.87□□□□□ -1.95
RaraP11416 Vmn1r185-202ENSMUST00000226694 5656 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
RaraP11416 Gm25485-201ENSMUST00000104120 132 ntBASIC2.86□□□□□ -1.95
RaraP11416 Gm24468-201ENSMUST00000104489 104 ntBASIC2.86□□□□□ -1.95
RaraP11416 Mir6353-201ENSMUST00000183596 113 ntBASIC2.86□□□□□ -1.95
RaraP11416 Olfr1485-ps1-201ENSMUST00000208420 370 ntBASIC2.86□□□□□ -1.95
RaraP11416 CT025579.1-201ENSMUST00000223779 366 ntBASIC2.86□□□□□ -1.95
RaraP11416 AC136457.1-201ENSMUST00000224195 156 ntBASIC2.86□□□□□ -1.95
RaraP11416 Gm23615-201ENSMUST00000082602 65 ntBASIC2.86□□□□□ -1.95
RaraP11416 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.86□□□□□ -1.95
RaraP11416 Snora33-201ENSMUST00000093556 129 ntBASIC2.86□□□□□ -1.95
RaraP11416 Atp11c-205ENSMUST00000154051 6039 ntTSL 5 BASIC2.86□□□□□ -1.95
RaraP11416 Gm14843-201ENSMUST00000119596 212 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm23470-201ENSMUST00000157129 120 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm23668-201ENSMUST00000157465 111 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm26411-201ENSMUST00000157668 107 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm23898-201ENSMUST00000158111 103 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm6788-201ENSMUST00000166459 270 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm25707-201ENSMUST00000175120 96 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm27878-201ENSMUST00000184000 106 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm28270-201ENSMUST00000188550 109 ntBASIC2.85□□□□□ -1.95
RaraP11416 Gm28328-201ENSMUST00000188869 109 ntBASIC2.85□□□□□ -1.95
RaraP11416 AC126939.1-201ENSMUST00000224943 226 ntBASIC2.85□□□□□ -1.95
RaraP11416 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RaraP11416 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC2.85□□□□□ -1.95
RaraP11416 Gm22249-201ENSMUST00000082485 136 ntBASIC2.85□□□□□ -1.95
RaraP11416 Acer3-202ENSMUST00000120520 3964 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
RaraP11416 Zfp729b-201ENSMUST00000012873 4835 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RaraP11416 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.84□□□□□ -1.95
RaraP11416 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.84□□□□□ -1.95
RaraP11416 Gm26339-201ENSMUST00000102368 99 ntBASIC2.84□□□□□ -1.95
RaraP11416 Traj44-201ENSMUST00000103698 61 ntAPPRIS P1 BASIC2.84□□□□□ -1.95
RaraP11416 Mir878-201ENSMUST00000104680 78 ntBASIC2.84□□□□□ -1.95
RaraP11416 Gm22551-201ENSMUST00000157795 103 ntBASIC2.84□□□□□ -1.95
RaraP11416 Gm25978-201ENSMUST00000158698 90 ntBASIC2.84□□□□□ -1.95
RaraP11416 Mir6928-201ENSMUST00000185166 70 ntBASIC2.84□□□□□ -1.95
RaraP11416 Gm44478-201ENSMUST00000204875 114 ntBASIC2.84□□□□□ -1.95
RaraP11416 Gm31450-201ENSMUST00000220668 132 ntTSL 2 BASIC2.84□□□□□ -1.95
RaraP11416 Gm23507-201ENSMUST00000083078 107 ntBASIC2.84□□□□□ -1.95
RaraP11416 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.84□□□□□ -1.95
RaraP11416 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.83□□□□□ -1.96
RaraP11416 Gm23011-201ENSMUST00000104148 132 ntBASIC2.83□□□□□ -1.96
RaraP11416 Gm16265-201ENSMUST00000134558 108 ntBASIC2.83□□□□□ -1.96
RaraP11416 Gm22387-201ENSMUST00000158191 131 ntBASIC2.83□□□□□ -1.96
RaraP11416 Gm23963-201ENSMUST00000179603 77 ntBASIC2.83□□□□□ -1.96
RaraP11416 Gm27446-201ENSMUST00000183963 89 ntBASIC2.83□□□□□ -1.96
RaraP11416 Gm18346-201ENSMUST00000216782 325 ntBASIC2.83□□□□□ -1.96
RaraP11416 Gm24038-201ENSMUST00000082872 159 ntBASIC2.83□□□□□ -1.96
RaraP11416 Mir410-201ENSMUST00000083563 81 ntBASIC2.83□□□□□ -1.96
RaraP11416 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.83□□□□□ -1.96
RaraP11416 Zfp813-ps-201ENSMUST00000186652 2506 ntBASIC2.82□□□□□ -1.96
RaraP11416 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC2.82□□□□□ -1.96
RaraP11416 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.82□□□□□ -1.96
RaraP11416 Gm23600-201ENSMUST00000157260 71 ntBASIC2.82□□□□□ -1.96
RaraP11416 Gm24913-201ENSMUST00000157286 107 ntBASIC2.82□□□□□ -1.96
RaraP11416 Gm22535-201ENSMUST00000158174 119 ntBASIC2.82□□□□□ -1.96
RaraP11416 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC2.82□□□□□ -1.96
RaraP11416 Mir7215-201ENSMUST00000200383 51 ntBASIC2.82□□□□□ -1.96
RaraP11416 Gm30534-201ENSMUST00000217928 207 ntBASIC2.82□□□□□ -1.96
RaraP11416 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.82□□□□□ -1.96
RaraP11416 Mir301-201ENSMUST00000083655 86 ntBASIC2.82□□□□□ -1.96
RaraP11416 Slain1os-201ENSMUST00000160117 3101 ntTSL 1 (best) BASIC2.82□□□□□ -1.96
RaraP11416 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.82□□□□□ -1.96
RaraP11416 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.82□□□□□ -1.96
RaraP11416 Gm26051-201ENSMUST00000104642 93 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm24907-201ENSMUST00000116932 128 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm24250-201ENSMUST00000157320 135 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm22228-201ENSMUST00000157364 101 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm22338-201ENSMUST00000157715 129 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm23770-201ENSMUST00000178009 108 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm22832-201ENSMUST00000178022 108 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm23863-201ENSMUST00000178265 108 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm24828-201ENSMUST00000178507 108 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm23052-201ENSMUST00000178633 108 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm25729-201ENSMUST00000179050 108 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm25359-201ENSMUST00000179315 108 ntBASIC2.81□□□□□ -1.96
RaraP11416 Gm22624-201ENSMUST00000179913 108 ntBASIC2.81□□□□□ -1.96
Retrieved 100 of 76,532 protein–RNA pairs in 186.4 ms