Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.27□□□□□ -2.05
Pcdha4O88689 Gm25460-201ENSMUST00000157954 127 ntBASIC2.27□□□□□ -2.05
Pcdha4O88689 Gm25796-201ENSMUST00000082645 163 ntBASIC2.27□□□□□ -2.05
Pcdha4O88689 Gm42664-201ENSMUST00000199417 3239 ntBASIC2.27□□□□□ -2.05
Pcdha4O88689 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.26□□□□□ -2.05
Pcdha4O88689 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 Gm22279-201ENSMUST00000157200 93 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 Mir7039-201ENSMUST00000183852 85 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 Gm27959-201ENSMUST00000185172 111 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.26□□□□□ -2.05
Pcdha4O88689 Gm8219-201ENSMUST00000218309 242 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 Gm25815-201ENSMUST00000082755 107 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 Mir93-201ENSMUST00000083593 88 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 Gm22866-201ENSMUST00000083947 177 ntBASIC2.26□□□□□ -2.05
Pcdha4O88689 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.25□□□□□ -2.05
Pcdha4O88689 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm15069-201ENSMUST00000117792 192 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm15068-201ENSMUST00000119796 192 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm13246-201ENSMUST00000120994 315 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm16328-201ENSMUST00000126985 196 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm24747-201ENSMUST00000157835 87 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm29604-201ENSMUST00000187176 163 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm37796-201ENSMUST00000195327 134 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm44358-201ENSMUST00000196301 98 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.25□□□□□ -2.05
Pcdha4O88689 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.25□□□□□ -2.05
Pcdha4O88689 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm22306-201ENSMUST00000082692 107 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm23445-201ENSMUST00000082800 107 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Mir300-201ENSMUST00000083485 79 ntBASIC2.25□□□□□ -2.05
Pcdha4O88689 Gm26011-201ENSMUST00000104410 104 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Pcdha4O88689 Gm11644-201ENSMUST00000119735 150 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Gm25060-201ENSMUST00000157374 130 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Gm23390-201ENSMUST00000157393 106 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Gm23548-201ENSMUST00000158963 106 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Mir6901-201ENSMUST00000185062 62 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Gm38298-201ENSMUST00000193578 118 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Gm43898-201ENSMUST00000204456 424 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Gm23303-201ENSMUST00000082714 152 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Mir322-201ENSMUST00000083484 95 ntBASIC2.24□□□□□ -2.05
Pcdha4O88689 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.24□□□□□ -2.05
Pcdha4O88689 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
Pcdha4O88689 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.23□□□□□ -2.05
Pcdha4O88689 Gm22666-201ENSMUST00000158717 164 ntBASIC2.23□□□□□ -2.05
Pcdha4O88689 AC120540.2-201ENSMUST00000221716 387 ntBASIC2.23□□□□□ -2.05
Pcdha4O88689 AC129085.5-201ENSMUST00000225468 400 ntBASIC2.23□□□□□ -2.05
Pcdha4O88689 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.22□□□□□ -2.05
Pcdha4O88689 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.22□□□□□ -2.05
Pcdha4O88689 Gm15067-201ENSMUST00000119534 156 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Gm22768-201ENSMUST00000158366 153 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Gm23504-201ENSMUST00000158988 95 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Gm23567-201ENSMUST00000178005 107 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Gm22264-201ENSMUST00000178200 107 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Hmga1b-202ENSMUST00000178955 120 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Mir6388-201ENSMUST00000184417 75 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Gm25357-201ENSMUST00000082745 72 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Gm26456-201ENSMUST00000082831 111 ntBASIC2.22□□□□□ -2.05
Pcdha4O88689 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm24171-201ENSMUST00000104126 131 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm14588-201ENSMUST00000119895 172 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm3788-201ENSMUST00000119949 136 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm16186-201ENSMUST00000120132 216 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm22790-201ENSMUST00000157229 129 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm24559-201ENSMUST00000157519 121 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm8508-201ENSMUST00000061226 363 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm25627-201ENSMUST00000084003 153 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.21□□□□□ -2.06
Pcdha4O88689 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm26074-201ENSMUST00000104063 129 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm25938-201ENSMUST00000104139 166 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Mir669d-201ENSMUST00000104644 121 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm25884-201ENSMUST00000157782 62 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm24851-201ENSMUST00000158028 103 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm22163-201ENSMUST00000158408 135 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm16584-201ENSMUST00000159267 189 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm28669-201ENSMUST00000188400 100 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm44464-201ENSMUST00000198010 138 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 mt-Tt-201ENSMUST00000082422 67 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 n-R5s197-201ENSMUST00000083302 119 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Mirlet7f-2-201ENSMUST00000083668 83 ntBASIC2.2□□□□□ -2.06
Pcdha4O88689 Gm26339-201ENSMUST00000102368 99 ntBASIC2.19□□□□□ -2.06
Pcdha4O88689 Gm24926-201ENSMUST00000178053 79 ntBASIC2.19□□□□□ -2.06
Pcdha4O88689 Gm22632-201ENSMUST00000178266 79 ntBASIC2.19□□□□□ -2.06
Pcdha4O88689 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.19□□□□□ -2.06
Pcdha4O88689 Gm25588-201ENSMUST00000082501 140 ntBASIC2.19□□□□□ -2.06
Pcdha4O88689 Gm24038-201ENSMUST00000082872 159 ntBASIC2.19□□□□□ -2.06
Pcdha4O88689 Mir34a-201ENSMUST00000083559 102 ntBASIC2.19□□□□□ -2.06
Pcdha4O88689 Gm14502-201ENSMUST00000118154 113 ntBASIC2.18□□□□□ -2.06
Pcdha4O88689 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.18□□□□□ -2.06
Pcdha4O88689 Gm24916-201ENSMUST00000157287 79 ntBASIC2.18□□□□□ -2.06
Pcdha4O88689 Gm24478-201ENSMUST00000157439 158 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 76,532 protein–RNA pairs in 288.1 ms