Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 Mir218-1-201ENSMUST00000083669 110 ntBASIC1.68□□□□□ -2.14
Cbx4O55187 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.68□□□□□ -2.14
Cbx4O55187 Gm25279-201ENSMUST00000122608 133 ntBASIC1.67□□□□□ -2.14
Cbx4O55187 Gm23181-201ENSMUST00000158685 110 ntBASIC1.67□□□□□ -2.14
Cbx4O55187 Gm22476-201ENSMUST00000158902 100 ntBASIC1.67□□□□□ -2.14
Cbx4O55187 Gm26864-201ENSMUST00000181346 156 ntBASIC1.67□□□□□ -2.14
Cbx4O55187 Gm27511-201ENSMUST00000183502 127 ntBASIC1.67□□□□□ -2.14
Cbx4O55187 Gm28537-201ENSMUST00000189026 315 ntBASIC1.67□□□□□ -2.14
Cbx4O55187 Gm29631-201ENSMUST00000191065 315 ntBASIC1.67□□□□□ -2.14
Cbx4O55187 Vmn2r69-201ENSMUST00000171213 2553 ntAPPRIS P1 TSL 5 BASIC1.67□□□□□ -2.14
Cbx4O55187 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.67□□□□□ -2.14
Cbx4O55187 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
Cbx4O55187 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.66□□□□□ -2.14
Cbx4O55187 Gm23172-201ENSMUST00000157160 124 ntBASIC1.66□□□□□ -2.14
Cbx4O55187 U6.1-201ENSMUST00000157443 101 ntBASIC1.66□□□□□ -2.14
Cbx4O55187 Gm17215-201ENSMUST00000170074 277 ntTSL 3 BASIC1.66□□□□□ -2.14
Cbx4O55187 Gm27928-201ENSMUST00000183747 256 ntBASIC1.66□□□□□ -2.14
Cbx4O55187 Mir6419-201ENSMUST00000184784 113 ntBASIC1.66□□□□□ -2.14
Cbx4O55187 Gm22723-201ENSMUST00000083820 129 ntBASIC1.66□□□□□ -2.14
Cbx4O55187 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.66□□□□□ -2.14
Cbx4O55187 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.65□□□□□ -2.14
Cbx4O55187 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
Cbx4O55187 Gm23208-201ENSMUST00000158666 127 ntBASIC1.65□□□□□ -2.15
Cbx4O55187 Gm24634-201ENSMUST00000158672 107 ntBASIC1.65□□□□□ -2.15
Cbx4O55187 Mir7225-201ENSMUST00000184178 54 ntBASIC1.65□□□□□ -2.15
Cbx4O55187 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.65□□□□□ -2.15
Cbx4O55187 Gm5002-201ENSMUST00000207145 223 ntBASIC1.65□□□□□ -2.15
Cbx4O55187 AC134601.1-201ENSMUST00000221058 109 ntBASIC1.65□□□□□ -2.15
Cbx4O55187 Mir34a-201ENSMUST00000083559 102 ntBASIC1.65□□□□□ -2.15
Cbx4O55187 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC1.65□□□□□ -2.15
Cbx4O55187 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm6952-201ENSMUST00000118629 159 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm15067-201ENSMUST00000119534 156 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm25828-201ENSMUST00000157087 95 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm22557-201ENSMUST00000157804 102 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm16404-201ENSMUST00000177739 468 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm25730-201ENSMUST00000178753 165 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm7258-201ENSMUST00000179317 300 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm14598-201ENSMUST00000180109 468 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm14625-201ENSMUST00000180231 468 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm9251-201ENSMUST00000197202 628 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.64□□□□□ -2.15
Cbx4O55187 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm26922-201ENSMUST00000082687 72 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Gm25697-201ENSMUST00000082902 98 ntBASIC1.64□□□□□ -2.15
Cbx4O55187 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC1.64□□□□□ -2.15
Cbx4O55187 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.64□□□□□ -2.15
Cbx4O55187 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Gm22545-201ENSMUST00000104350 132 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Mir3096-201ENSMUST00000116685 71 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Gm25323-201ENSMUST00000122555 103 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Gm22386-201ENSMUST00000158192 129 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Gm26004-201ENSMUST00000158804 116 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Mir3057-201ENSMUST00000175040 91 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Gm28669-201ENSMUST00000188400 100 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Mir490-201ENSMUST00000093567 84 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Gm21940-201ENSMUST00000204940 2278 ntBASIC1.63□□□□□ -2.15
Cbx4O55187 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.62□□□□□ -2.15
Cbx4O55187 Gm23990-201ENSMUST00000117031 117 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 Gm22477-201ENSMUST00000122569 316 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 Gm24131-201ENSMUST00000158539 107 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 Gm22665-201ENSMUST00000158720 275 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 Gm24366-201ENSMUST00000175383 86 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.62□□□□□ -2.15
Cbx4O55187 Gm19790-201ENSMUST00000214414 251 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 AC069074.1-201ENSMUST00000220048 381 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 Gm22306-201ENSMUST00000082692 107 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 Gm24165-201ENSMUST00000082718 128 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 Gm22743-201ENSMUST00000083445 133 ntBASIC1.62□□□□□ -2.15
Cbx4O55187 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.61□□□□□ -2.15
Cbx4O55187 Gm22761-201ENSMUST00000102278 96 ntBASIC1.61□□□□□ -2.15
Cbx4O55187 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.61□□□□□ -2.15
Cbx4O55187 Gm22348-201ENSMUST00000178674 79 ntBASIC1.61□□□□□ -2.15
Cbx4O55187 Gm38364-201ENSMUST00000191814 179 ntBASIC1.61□□□□□ -2.15
Cbx4O55187 Gm44922-201ENSMUST00000206690 90 ntBASIC1.61□□□□□ -2.15
Cbx4O55187 Gm23100-201ENSMUST00000083455 141 ntBASIC1.61□□□□□ -2.15
Cbx4O55187 Mir221-201ENSMUST00000083488 95 ntBASIC1.61□□□□□ -2.15
Cbx4O55187 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Cbx4O55187 Traj26-201ENSMUST00000103715 60 ntAPPRIS P1 BASIC1.6□□□□□ -2.15
Cbx4O55187 Mir297a-2-201ENSMUST00000103795 90 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Gm22228-201ENSMUST00000157364 101 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Gm25599-201ENSMUST00000157816 103 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Gm23289-201ENSMUST00000175615 108 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Gm27517-201ENSMUST00000184347 236 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Gm43602-201ENSMUST00000196772 300 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Gm44464-201ENSMUST00000198010 138 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 AC154282.1-201ENSMUST00000223154 265 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Gm24406-201ENSMUST00000083026 128 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Gm22704-201ENSMUST00000083027 137 ntBASIC1.6□□□□□ -2.15
Cbx4O55187 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.6□□□□□ -2.15
Cbx4O55187 Gm13246-201ENSMUST00000120994 315 ntBASIC1.59□□□□□ -2.15
Cbx4O55187 Gm22603-201ENSMUST00000157603 96 ntBASIC1.59□□□□□ -2.15
Cbx4O55187 Gm22850-201ENSMUST00000157714 82 ntBASIC1.59□□□□□ -2.15
Cbx4O55187 Gm22099-201ENSMUST00000157925 123 ntBASIC1.59□□□□□ -2.15
Cbx4O55187 Gm24106-201ENSMUST00000175498 127 ntBASIC1.59□□□□□ -2.15
Cbx4O55187 Gm29603-201ENSMUST00000186792 334 ntBASIC1.59□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 178 ms