Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Gm16021-201ENSMUST00000121176 219 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Gm22141-201ENSMUST00000157403 277 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Gm23253-201ENSMUST00000157441 104 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Gm24291-201ENSMUST00000157633 162 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Gm25558-201ENSMUST00000158083 106 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Gm25771-201ENSMUST00000158565 144 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Gm43626-201ENSMUST00000198575 162 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Mir369-201ENSMUST00000083627 79 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Mir301-201ENSMUST00000083655 86 ntBASIC2.31□□□□□ -2.04
Pcdh1F7BJK1 Olfr1206-202ENSMUST00000216950 3303 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Gm15289-201ENSMUST00000117793 244 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Tnfaip8-206ENSMUST00000145726 632 ntTSL 3 BASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Gm25884-201ENSMUST00000157782 62 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Mir3965-201ENSMUST00000175570 69 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Mir3961-201ENSMUST00000198795 59 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Gm42960-201ENSMUST00000202160 241 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Snord104-201ENSMUST00000083192 70 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Mir34a-201ENSMUST00000083559 102 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.3□□□□□ -2.04
Pcdh1F7BJK1 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm24068-201ENSMUST00000104513 132 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm23907-201ENSMUST00000104595 189 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm25270-201ENSMUST00000122606 138 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm23898-201ENSMUST00000158111 103 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm23854-201ENSMUST00000158378 108 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Mir7050-201ENSMUST00000184636 60 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm28358-202ENSMUST00000189292 223 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm34314-201ENSMUST00000203622 367 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 CT009696.1-201ENSMUST00000215745 256 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm24038-201ENSMUST00000082872 159 ntBASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
Pcdh1F7BJK1 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Gm25878-201ENSMUST00000104327 93 ntBASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Gm14946-201ENSMUST00000119859 296 ntBASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Gm22490-201ENSMUST00000157188 119 ntBASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Gm23390-201ENSMUST00000157393 106 ntBASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Gm25367-201ENSMUST00000158846 106 ntBASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Gm25069-201ENSMUST00000175238 86 ntBASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Gm22055-201ENSMUST00000083388 107 ntBASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Snora33-201ENSMUST00000093556 129 ntBASIC2.28□□□□□ -2.04
Pcdh1F7BJK1 Vmn1r78-202ENSMUST00000228244 7931 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 AC132221.1-201ENSMUST00000220577 3841 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 BC022960-201ENSMUST00000119987 1815 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm26420-201ENSMUST00000104273 103 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm14937-201ENSMUST00000119709 208 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm14671-201ENSMUST00000121790 262 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm22079-201ENSMUST00000157592 106 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm23033-201ENSMUST00000157996 134 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Mir6916-201ENSMUST00000184514 63 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm44325-201ENSMUST00000196757 77 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 AC124537.1-201ENSMUST00000222890 159 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm25357-201ENSMUST00000082745 72 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm26168-201ENSMUST00000083787 112 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.27□□□□□ -2.05
Pcdh1F7BJK1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Gm23128-201ENSMUST00000104257 132 ntBASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Gm26415-201ENSMUST00000157673 292 ntBASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Gm26214-201ENSMUST00000158581 107 ntBASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Gm23128-202ENSMUST00000196578 133 ntBASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Mir3069-201ENSMUST00000198802 65 ntBASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Gm45791-201ENSMUST00000212908 352 ntBASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Gm8031-201ENSMUST00000213430 626 ntBASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Gm26326-201ENSMUST00000083070 129 ntBASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Tlr8-202ENSMUST00000112170 3431 ntAPPRIS P1 TSL 2 BASIC2.26□□□□□ -2.05
Pcdh1F7BJK1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.25□□□□□ -2.05
Pcdh1F7BJK1 Gm24958-201ENSMUST00000158009 97 ntBASIC2.25□□□□□ -2.05
Pcdh1F7BJK1 Gm25769-201ENSMUST00000158569 127 ntBASIC2.25□□□□□ -2.05
Pcdh1F7BJK1 Gm27379-201ENSMUST00000183730 123 ntBASIC2.25□□□□□ -2.05
Pcdh1F7BJK1 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.25□□□□□ -2.05
Pcdh1F7BJK1 Gm16976-205ENSMUST00000227324 226 ntBASIC2.25□□□□□ -2.05
Pcdh1F7BJK1 Gm37664-201ENSMUST00000194607 3813 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Gm22004-201ENSMUST00000101884 107 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Mir450b-201ENSMUST00000102095 82 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Gm25091-201ENSMUST00000103997 71 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Mir1195-201ENSMUST00000116818 98 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Gm22796-201ENSMUST00000157234 106 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Gm43722-201ENSMUST00000196054 124 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Gm43324-201ENSMUST00000197482 289 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Gm19855-201ENSMUST00000210145 249 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
Pcdh1F7BJK1 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.23□□□□□ -2.05
Pcdh1F7BJK1 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.23□□□□□ -2.05
Pcdh1F7BJK1 Gm22387-201ENSMUST00000158191 131 ntBASIC2.23□□□□□ -2.05
Pcdh1F7BJK1 Gm22947-201ENSMUST00000158559 91 ntBASIC2.23□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 177 ms