Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm14837-201ENSMUST00000119688 206 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm3788-201ENSMUST00000119949 136 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm24385-201ENSMUST00000122694 350 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm24915-201ENSMUST00000157288 78 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm22433-201ENSMUST00000158550 142 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm22888-201ENSMUST00000158640 77 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm22258-201ENSMUST00000177645 94 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm26032-201ENSMUST00000178535 94 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm25210-201ENSMUST00000178813 94 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm25157-201ENSMUST00000178914 94 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm22046-201ENSMUST00000179027 94 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm22941-201ENSMUST00000179630 94 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm25471-201ENSMUST00000180126 94 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm9251-201ENSMUST00000197202 628 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm45508-201ENSMUST00000209298 299 ntBASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Trbv4A0A075B5I2 Gm27579-201ENSMUST00000158113 63 ntBASIC1.25□□□□□ -2.21
Trbv4A0A075B5I2 Gm44326-201ENSMUST00000198226 101 ntBASIC1.25□□□□□ -2.21
Trbv4A0A075B5I2 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.25□□□□□ -2.21
Trbv4A0A075B5I2 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.25□□□□□ -2.21
Trbv4A0A075B5I2 Snord96a-201ENSMUST00000082791 81 ntBASIC1.25□□□□□ -2.21
Trbv4A0A075B5I2 Mir384-201ENSMUST00000083565 88 ntBASIC1.25□□□□□ -2.21
Trbv4A0A075B5I2 Gm24523-201ENSMUST00000083965 132 ntBASIC1.25□□□□□ -2.21
Trbv4A0A075B5I2 BC022960-201ENSMUST00000119987 1815 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm26080-201ENSMUST00000104069 131 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm11856-201ENSMUST00000118712 276 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm22477-201ENSMUST00000122569 316 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm27476-201ENSMUST00000183366 104 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Mir7063-201ENSMUST00000184158 91 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm28669-201ENSMUST00000188400 100 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm44408-201ENSMUST00000200205 66 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm22744-201ENSMUST00000083444 65 ntBASIC1.24□□□□□ -2.21
Trbv4A0A075B5I2 Gm22785-201ENSMUST00000104087 132 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Snord89-201ENSMUST00000104516 110 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Snord19-201ENSMUST00000104609 76 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Mir880-201ENSMUST00000104809 78 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Gm23336-201ENSMUST00000117023 123 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Gm25783-201ENSMUST00000122525 190 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Gm24076-201ENSMUST00000158179 94 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Gm25015-201ENSMUST00000158400 128 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Gm26213-201ENSMUST00000158582 110 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Traj60-201ENSMUST00000167781 54 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Gm27402-201ENSMUST00000183890 120 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Gm29603-201ENSMUST00000186792 334 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Trbv4A0A075B5I2 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.22□□□□□ -2.21
Trbv4A0A075B5I2 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.22□□□□□ -2.21
Trbv4A0A075B5I2 AC129085.1-201ENSMUST00000225263 165 ntBASIC1.22□□□□□ -2.21
Trbv4A0A075B5I2 Gm23423-201ENSMUST00000082782 106 ntBASIC1.22□□□□□ -2.21
Trbv4A0A075B5I2 Mir146-201ENSMUST00000083667 65 ntBASIC1.22□□□□□ -2.21
Trbv4A0A075B5I2 Skint5-202ENSMUST00000169631 4497 ntAPPRIS P5 TSL 1 (best) BASIC1.22□□□□□ -2.21
Trbv4A0A075B5I2 Gm24867-201ENSMUST00000104161 107 ntBASIC1.21□□□□□ -2.22
Trbv4A0A075B5I2 Gm25315-201ENSMUST00000116823 121 ntBASIC1.21□□□□□ -2.22
Trbv4A0A075B5I2 Gm23655-201ENSMUST00000122627 105 ntBASIC1.21□□□□□ -2.22
Trbv4A0A075B5I2 Gm25558-201ENSMUST00000158083 106 ntBASIC1.21□□□□□ -2.22
Trbv4A0A075B5I2 Gm28344-201ENSMUST00000185704 279 ntBASIC1.21□□□□□ -2.22
Trbv4A0A075B5I2 Gm43199-201ENSMUST00000200019 307 ntBASIC1.21□□□□□ -2.22
Trbv4A0A075B5I2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.21□□□□□ -2.22
Trbv4A0A075B5I2 Olfr805-203ENSMUST00000216794 3199 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Gm11792-201ENSMUST00000120640 168 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Gm23106-201ENSMUST00000157554 101 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Gm22485-201ENSMUST00000157990 109 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Gm25267-201ENSMUST00000158522 63 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Mir6350-201ENSMUST00000183639 105 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Mir7050-201ENSMUST00000184636 60 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Gm22980-201ENSMUST00000082608 70 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Gm22686-201ENSMUST00000082847 100 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Gm22704-201ENSMUST00000083027 137 ntBASIC1.2□□□□□ -2.22
Trbv4A0A075B5I2 Gm24588-201ENSMUST00000116696 83 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Tra2b-ps-201ENSMUST00000119906 168 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm25223-201ENSMUST00000158200 110 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm23545-201ENSMUST00000158205 104 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm23141-201ENSMUST00000178682 94 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm16399-201ENSMUST00000181423 219 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Mir3569-201ENSMUST00000185080 58 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm38074-201ENSMUST00000193467 145 ntTSL 5 BASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm44921-201ENSMUST00000205290 301 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm23299-201ENSMUST00000082708 79 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm24522-201ENSMUST00000083964 108 ntBASIC1.19□□□□□ -2.22
Trbv4A0A075B5I2 Gm25495-201ENSMUST00000104431 131 ntBASIC1.18□□□□□ -2.22
Trbv4A0A075B5I2 Gm23907-201ENSMUST00000104595 189 ntBASIC1.18□□□□□ -2.22
Trbv4A0A075B5I2 Gm24000-201ENSMUST00000158063 89 ntBASIC1.18□□□□□ -2.22
Trbv4A0A075B5I2 Gm22767-201ENSMUST00000158365 165 ntBASIC1.18□□□□□ -2.22
Trbv4A0A075B5I2 Gm23339-201ENSMUST00000158962 139 ntBASIC1.18□□□□□ -2.22
Trbv4A0A075B5I2 Gm23289-201ENSMUST00000175615 108 ntBASIC1.18□□□□□ -2.22
Trbv4A0A075B5I2 Gm25855-201ENSMUST00000082787 72 ntBASIC1.18□□□□□ -2.22
Trbv4A0A075B5I2 Gm24171-201ENSMUST00000104126 131 ntBASIC1.17□□□□□ -2.22
Trbv4A0A075B5I2 Gm11857-201ENSMUST00000119817 324 ntBASIC1.17□□□□□ -2.22
Trbv4A0A075B5I2 Snord13-201ENSMUST00000157627 104 ntBASIC1.17□□□□□ -2.22
Trbv4A0A075B5I2 Gm25663-201ENSMUST00000157698 135 ntBASIC1.17□□□□□ -2.22
Trbv4A0A075B5I2 Gm25654-201ENSMUST00000158467 88 ntBASIC1.17□□□□□ -2.22
Trbv4A0A075B5I2 Trav5d-3-201ENSMUST00000170041 270 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 208.2 ms