Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Gm28926-201ENSMUST00000191063 680 ntBASIC-0.12□□□□□ -2.43
Scn8aQ9WTU3 Gm29014-201ENSMUST00000191422 326 ntBASIC-0.12□□□□□ -2.43
Scn8aQ9WTU3 CT485612.2-201ENSMUST00000223014 151 ntBASIC-0.12□□□□□ -2.43
Scn8aQ9WTU3 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC-0.12□□□□□ -2.43
Scn8aQ9WTU3 Mir214-201ENSMUST00000083582 110 ntBASIC-0.12□□□□□ -2.43
Scn8aQ9WTU3 Gm23039-201ENSMUST00000083870 161 ntBASIC-0.12□□□□□ -2.43
Scn8aQ9WTU3 Gm22757-201ENSMUST00000102279 96 ntBASIC-0.13□□□□□ -2.43
Scn8aQ9WTU3 Gm25878-201ENSMUST00000104327 93 ntBASIC-0.13□□□□□ -2.43
Scn8aQ9WTU3 Gm24015-201ENSMUST00000157725 232 ntBASIC-0.13□□□□□ -2.43
Scn8aQ9WTU3 Gm24880-201ENSMUST00000158776 85 ntBASIC-0.13□□□□□ -2.43
Scn8aQ9WTU3 Gm24796-201ENSMUST00000104007 107 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 n-R5s73-201ENSMUST00000122508 107 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Gm22077-201ENSMUST00000157594 93 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Olfr1481-ps1-201ENSMUST00000207312 134 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 AL929265.1-201ENSMUST00000213427 125 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 AC154424.1-201ENSMUST00000225883 799 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Gm25855-201ENSMUST00000082787 72 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Mir382-201ENSMUST00000083494 76 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Mir34a-201ENSMUST00000083559 102 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Gm12255-201ENSMUST00000117184 284 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Gm20409-201ENSMUST00000173457 130 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Gm18588-201ENSMUST00000177308 492 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Gm44457-201ENSMUST00000198109 76 ntBASIC-0.14□□□□□ -2.43
Scn8aQ9WTU3 Gm25318-201ENSMUST00000122554 314 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 Gm25307-201ENSMUST00000158885 106 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 Gm45313-201ENSMUST00000210584 178 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 AC120394.1-201ENSMUST00000217153 351 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 Mir709-201ENSMUST00000102190 88 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 Gm29013-201ENSMUST00000187431 237 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 Rpl23a-ps9-201ENSMUST00000188369 463 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 Rpl23a-ps11-201ENSMUST00000191583 463 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 Gm6105-201ENSMUST00000200580 624 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 AL772265.1-201ENSMUST00000214379 305 ntBASIC-0.15□□□□□ -2.43
Scn8aQ9WTU3 Gm21750-201ENSMUST00000098874 1497 ntAPPRIS P1 BASIC-0.16□□□□□ -2.43
Scn8aQ9WTU3 Gm22021-201ENSMUST00000104353 107 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm10972-201ENSMUST00000107276 81 ntAPPRIS P1 TSL 5 BASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm13596-201ENSMUST00000153354 292 ntTSL 5 BASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm25241-201ENSMUST00000174909 84 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm26217-201ENSMUST00000175212 84 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm23416-201ENSMUST00000175520 95 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm24487-201ENSMUST00000178017 63 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm18185-201ENSMUST00000186725 667 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm44135-201ENSMUST00000205221 368 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 AC098718.2-201ENSMUST00000226822 285 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm22685-201ENSMUST00000082848 106 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 AC160115.1-201ENSMUST00000224678 1574 ntBASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC-0.16□□□□□ -2.44
Scn8aQ9WTU3 Gm13560-201ENSMUST00000121865 329 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm24191-201ENSMUST00000157977 122 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm22327-201ENSMUST00000158899 108 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm17528-201ENSMUST00000171026 239 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm28217-201ENSMUST00000188613 648 ntTSL 5 BASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm45688-201ENSMUST00000210002 101 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 AC112972.1-201ENSMUST00000227329 365 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm25802-201ENSMUST00000082639 77 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Mir200a-201ENSMUST00000083466 90 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm25309-201ENSMUST00000116728 126 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm10721-201ENSMUST00000143083 669 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm23352-201ENSMUST00000158428 64 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm24549-201ENSMUST00000158647 139 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm27735-201ENSMUST00000185085 76 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm28541-201ENSMUST00000185206 442 ntTSL 5 BASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm28585-201ENSMUST00000187587 442 ntTSL 5 BASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm28811-201ENSMUST00000190650 442 ntTSL 5 BASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm45543-201ENSMUST00000209327 88 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm23851-201ENSMUST00000083831 103 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm23041-201ENSMUST00000083868 106 ntBASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm10718-201ENSMUST00000099046 681 ntAPPRIS P1 TSL 5 BASIC-0.17□□□□□ -2.44
Scn8aQ9WTU3 Gm20939-201ENSMUST00000108007 1572 ntAPPRIS P1 TSL 5 BASIC-0.18□□□□□ -2.44
Scn8aQ9WTU3 Mir465b-1-201ENSMUST00000103940 79 ntBASIC-0.18□□□□□ -2.44
Scn8aQ9WTU3 Mir465b-2-201ENSMUST00000104662 79 ntBASIC-0.18□□□□□ -2.44
Scn8aQ9WTU3 Gm17132-201ENSMUST00000109542 1158 ntBASIC-0.18□□□□□ -2.44
Scn8aQ9WTU3 Gm13711-201ENSMUST00000119708 453 ntBASIC-0.18□□□□□ -2.44
Scn8aQ9WTU3 Gm17148-201ENSMUST00000164702 249 ntBASIC-0.18□□□□□ -2.44
Scn8aQ9WTU3 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC-0.18□□□□□ -2.44
Scn8aQ9WTU3 Mir767-201ENSMUST00000103256 107 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Mir1951-201ENSMUST00000157981 89 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Gm8508-201ENSMUST00000061226 363 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 mt-Tl1-201ENSMUST00000082391 75 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Gm25586-201ENSMUST00000082499 112 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Gm24909-201ENSMUST00000157290 280 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Gm23584-201ENSMUST00000157655 129 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Gm24000-201ENSMUST00000158063 89 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Gm17332-201ENSMUST00000165626 87 ntAPPRIS P1 BASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Esp24-201ENSMUST00000180245 207 ntAPPRIS P1 TSL 5 BASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Snora16a-202ENSMUST00000196061 137 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 AC141438.3-201ENSMUST00000215632 202 ntBASIC-0.19□□□□□ -2.44
Scn8aQ9WTU3 Gm14782-201ENSMUST00000120151 195 ntBASIC-0.2□□□□□ -2.44
Scn8aQ9WTU3 Gm24559-201ENSMUST00000157519 121 ntBASIC-0.2□□□□□ -2.44
Scn8aQ9WTU3 Gm26022-201ENSMUST00000158663 108 ntBASIC-0.2□□□□□ -2.44
Scn8aQ9WTU3 Gm25486-201ENSMUST00000158726 63 ntBASIC-0.2□□□□□ -2.44
Scn8aQ9WTU3 Gm44352-201ENSMUST00000196358 110 ntBASIC-0.2□□□□□ -2.44
Scn8aQ9WTU3 AC167192.2-201ENSMUST00000224794 198 ntBASIC-0.2□□□□□ -2.44
Scn8aQ9WTU3 Vmn1r230-201ENSMUST00000053974 951 ntAPPRIS P1 BASIC-0.2□□□□□ -2.44
Retrieved 100 of 76,532 protein–RNA pairs in 199 ms