Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC3.15□□□□□ -1.9
Nubp1Q9R060 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
Nubp1Q9R060 Vmn2r37-201ENSMUST00000072787 3081 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Nubp1Q9R060 Gm24014-201ENSMUST00000157728 157 ntBASIC3.15□□□□□ -1.91
Nubp1Q9R060 Gm22963-201ENSMUST00000157960 91 ntBASIC3.15□□□□□ -1.91
Nubp1Q9R060 Gm17117-201ENSMUST00000163665 299 ntBASIC3.15□□□□□ -1.91
Nubp1Q9R060 Gm37428-201ENSMUST00000193886 137 ntBASIC3.15□□□□□ -1.91
Nubp1Q9R060 Olfr1007-ps1-201ENSMUST00000217468 138 ntBASIC3.15□□□□□ -1.91
Nubp1Q9R060 AC144783.2-201ENSMUST00000219089 195 ntBASIC3.15□□□□□ -1.91
Nubp1Q9R060 Snora20-201ENSMUST00000082703 128 ntBASIC3.15□□□□□ -1.91
Nubp1Q9R060 Cbll1-201ENSMUST00000064240 3937 ntAPPRIS ALT1 TSL 5 BASIC3.15□□□□□ -1.91
Nubp1Q9R060 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.91
Nubp1Q9R060 Gm44846-201ENSMUST00000207127 3243 ntBASIC3.15□□□□□ -1.91
Nubp1Q9R060 Gm45844-205ENSMUST00000210333 3861 ntAPPRIS P5 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm15272-201ENSMUST00000120865 233 ntBASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm8244-201ENSMUST00000121254 264 ntBASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm15903-201ENSMUST00000155796 310 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm24668-201ENSMUST00000158935 104 ntBASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm25633-201ENSMUST00000178565 107 ntBASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm44887-201ENSMUST00000208980 178 ntBASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm22805-201ENSMUST00000082739 107 ntBASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm24697-201ENSMUST00000083881 107 ntBASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm25630-201ENSMUST00000084000 162 ntBASIC3.14□□□□□ -1.91
Nubp1Q9R060 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
Nubp1Q9R060 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC3.14□□□□□ -1.91
Nubp1Q9R060 Gm43032-201ENSMUST00000197967 3123 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Slc25a36-201ENSMUST00000035024 4043 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
Nubp1Q9R060 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.13□□□□□ -1.91
Nubp1Q9R060 Traj21-201ENSMUST00000103720 57 ntAPPRIS P1 BASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm23986-201ENSMUST00000157144 63 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm24244-201ENSMUST00000157317 130 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm25373-201ENSMUST00000158156 115 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm24727-201ENSMUST00000158231 144 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm27903-201ENSMUST00000175482 126 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm26073-201ENSMUST00000179906 127 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Trbv7-201ENSMUST00000193339 402 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Mir7118-201ENSMUST00000197760 61 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm23370-201ENSMUST00000199545 130 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm23790-201ENSMUST00000083013 107 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 Gm38211-201ENSMUST00000192814 7217 ntBASIC3.13□□□□□ -1.91
Nubp1Q9R060 D930036K23Rik-201ENSMUST00000191894 3964 ntBASIC3.12□□□□□ -1.91
Nubp1Q9R060 Zfp638-206ENSMUST00000203324 3822 ntAPPRIS ALT2 TSL 5 BASIC3.12□□□□□ -1.91
Nubp1Q9R060 Strbp-201ENSMUST00000028279 16348 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nubp1Q9R060 Olfr394-203ENSMUST00000216608 5628 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nubp1Q9R060 Gm24649-201ENSMUST00000157106 134 ntBASIC3.12□□□□□ -1.91
Nubp1Q9R060 Gm24851-201ENSMUST00000158028 103 ntBASIC3.12□□□□□ -1.91
Nubp1Q9R060 Traj61-201ENSMUST00000165025 72 ntBASIC3.12□□□□□ -1.91
Nubp1Q9R060 Gm27374-201ENSMUST00000183660 81 ntBASIC3.12□□□□□ -1.91
Nubp1Q9R060 Gm45159-201ENSMUST00000208630 25241 ntTSL 5 BASIC3.12□□□□□ -1.91
Nubp1Q9R060 Olfr509-204ENSMUST00000215075 3418 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
Nubp1Q9R060 Mir878-201ENSMUST00000104680 78 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 Gm26215-201ENSMUST00000158584 139 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 Gm22129-201ENSMUST00000179034 107 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 Trgj2-201ENSMUST00000197113 60 ntAPPRIS P1 BASIC3.11□□□□□ -1.91
Nubp1Q9R060 Gm43932-201ENSMUST00000204499 52 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 Gm44223-201ENSMUST00000204854 114 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 4930469B13Rik-202ENSMUST00000224808 348 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 Gm25357-201ENSMUST00000082745 72 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 Gm24524-201ENSMUST00000082925 170 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 Mir490-201ENSMUST00000093567 84 ntBASIC3.11□□□□□ -1.91
Nubp1Q9R060 Olfr469-202ENSMUST00000213252 3164 ntAPPRIS P1 TSL 5 BASIC3.11□□□□□ -1.91
Nubp1Q9R060 Rab27b-203ENSMUST00000121693 6891 ntAPPRIS P1 TSL 1 (best) BASIC3.1□□□□□ -1.91
Nubp1Q9R060 Gm24118-201ENSMUST00000103972 126 ntBASIC3.1□□□□□ -1.91
Nubp1Q9R060 Gm25526-201ENSMUST00000104332 132 ntBASIC3.1□□□□□ -1.91
Nubp1Q9R060 Gm23716-201ENSMUST00000157348 144 ntBASIC3.1□□□□□ -1.91
Nubp1Q9R060 AC158631.1-201ENSMUST00000219202 138 ntBASIC3.1□□□□□ -1.91
Nubp1Q9R060 AC126691.1-201ENSMUST00000226534 202 ntBASIC3.1□□□□□ -1.91
Nubp1Q9R060 Gm22354-201ENSMUST00000083919 70 ntBASIC3.1□□□□□ -1.91
Nubp1Q9R060 Fsip2-203ENSMUST00000143764 21116 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Nubp1Q9R060 Olfr652-202ENSMUST00000215410 4672 ntAPPRIS P1 TSL 5 BASIC3.1□□□□□ -1.91
Nubp1Q9R060 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 Olfr298-203ENSMUST00000216968 3451 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Nubp1Q9R060 AC153950.1-201ENSMUST00000219916 3238 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 9330159F19Rik-201ENSMUST00000092627 5681 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Nubp1Q9R060 Olfr267-202ENSMUST00000216719 4050 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
Nubp1Q9R060 Gm14440-202ENSMUST00000109051 3382 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.91
Nubp1Q9R060 Gm26100-201ENSMUST00000157245 127 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 Gm23775-201ENSMUST00000158991 249 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 Gm25476-201ENSMUST00000175125 185 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC3.09□□□□□ -1.91
Nubp1Q9R060 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 AC173115.1-201ENSMUST00000220835 211 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 Gm6109-201ENSMUST00000223297 348 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 Gm22743-201ENSMUST00000083445 133 ntBASIC3.09□□□□□ -1.91
Nubp1Q9R060 Gm32014-201ENSMUST00000214779 5145 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
Nubp1Q9R060 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Nubp1Q9R060 Gm25539-201ENSMUST00000116886 122 ntBASIC3.08□□□□□ -1.92
Nubp1Q9R060 Gm12025-201ENSMUST00000117768 144 ntBASIC3.08□□□□□ -1.92
Nubp1Q9R060 Gm11414-201ENSMUST00000121795 263 ntBASIC3.08□□□□□ -1.92
Nubp1Q9R060 Gm23349-201ENSMUST00000158432 98 ntBASIC3.08□□□□□ -1.92
Nubp1Q9R060 Gm22888-201ENSMUST00000158640 77 ntBASIC3.08□□□□□ -1.92
Nubp1Q9R060 Gm24656-201ENSMUST00000177548 132 ntBASIC3.08□□□□□ -1.92
Nubp1Q9R060 Gm45038-201ENSMUST00000207537 3838 ntBASIC3.08□□□□□ -1.92
Nubp1Q9R060 AC174457.1-201ENSMUST00000215932 226 ntBASIC3.08□□□□□ -1.92
Nubp1Q9R060 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC3.08□□□□□ -1.92
Nubp1Q9R060 Adgrg4-204ENSMUST00000153784 9329 ntAPPRIS P5 TSL 5 BASIC3.08□□□□□ -1.92
Nubp1Q9R060 Pik3ca-201ENSMUST00000029201 8917 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
Nubp1Q9R060 Olfr816-202ENSMUST00000213438 3306 ntAPPRIS P1 TSL 5 BASIC3.08□□□□□ -1.92
Nubp1Q9R060 Olfr898-203ENSMUST00000217063 4169 ntAPPRIS ALT2 TSL 5 BASIC3.08□□□□□ -1.92
Nubp1Q9R060 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.08□□□□□ -1.92
Retrieved 100 of 76,532 protein–RNA pairs in 239.2 ms