Protein–RNA interactions for Protein: Q9QZR9

Col4a4, Collagen alpha-4(IV) chain, mousemouse

Predictions only

Length 1,682 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a4Q9QZR9 CT033785.1-201ENSMUST00000224872 272 ntBASIC1.04□□□□□ -2.24
Col4a4Q9QZR9 Gm26495-201ENSMUST00000083152 137 ntBASIC1.04□□□□□ -2.24
Col4a4Q9QZR9 Gm24412-201ENSMUST00000083426 109 ntBASIC1.04□□□□□ -2.24
Col4a4Q9QZR9 Gm26314-201ENSMUST00000083891 107 ntBASIC1.04□□□□□ -2.24
Col4a4Q9QZR9 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Mir374b-201ENSMUST00000102314 95 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Mir1b-201ENSMUST00000117012 122 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm14782-201ENSMUST00000120151 195 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm25115-201ENSMUST00000157187 140 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm26405-201ENSMUST00000158495 100 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm23180-201ENSMUST00000158686 125 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Snord87-201ENSMUST00000175437 87 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm7958-201ENSMUST00000178255 468 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm25457-201ENSMUST00000179509 107 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm7950-201ENSMUST00000179633 468 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm27421-201ENSMUST00000184729 167 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm27540-201ENSMUST00000184950 187 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Scgb1b13-ps-201ENSMUST00000187330 273 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Mir3961-201ENSMUST00000198795 59 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 AC165106.2-201ENSMUST00000226749 97 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Gm23100-201ENSMUST00000083455 141 ntBASIC1.03□□□□□ -2.24
Col4a4Q9QZR9 Olfr606-202ENSMUST00000214631 2649 ntAPPRIS P1 TSL 5 BASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm24381-201ENSMUST00000122697 104 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm24262-201ENSMUST00000157431 144 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm22082-201ENSMUST00000157587 161 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm22768-201ENSMUST00000158366 153 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm23047-201ENSMUST00000177661 94 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm25615-201ENSMUST00000177836 94 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm26426-201ENSMUST00000177866 123 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm23141-201ENSMUST00000178682 94 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm22450-201ENSMUST00000179641 107 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm26060-201ENSMUST00000180094 123 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm25473-201ENSMUST00000180191 107 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 AC173482.4-201ENSMUST00000225096 348 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm22248-201ENSMUST00000082482 150 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm24856-201ENSMUST00000082809 107 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm26071-201ENSMUST00000083261 107 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gm24521-201ENSMUST00000083958 107 ntBASIC1.02□□□□□ -2.25
Col4a4Q9QZR9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Mir541-201ENSMUST00000102097 90 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Traj6-201ENSMUST00000103734 62 ntAPPRIS P1 BASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm14491-201ENSMUST00000121919 199 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm12162-202ENSMUST00000129432 127 ntTSL 5 BASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm23892-201ENSMUST00000158105 130 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm23258-201ENSMUST00000158319 106 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm22621-201ENSMUST00000179678 74 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm29005-201ENSMUST00000186773 320 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm19901-201ENSMUST00000192191 495 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 7330423F06Rik-201ENSMUST00000197499 301 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm44853-201ENSMUST00000209070 250 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm45543-201ENSMUST00000209327 88 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm24615-201ENSMUST00000083268 113 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm22973-201ENSMUST00000083298 191 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Gm24164-201ENSMUST00000093663 104 ntBASIC1.01□□□□□ -2.25
Col4a4Q9QZR9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm14674-201ENSMUST00000117816 342 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm24629-201ENSMUST00000122762 89 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm25375-201ENSMUST00000158157 135 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm25253-201ENSMUST00000179958 107 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 5430435K18Rik-201ENSMUST00000202597 661 ntTSL 1 (best) BASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm25789-201ENSMUST00000083294 76 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Traj56-201ENSMUST00000103689 63 ntAPPRIS P1 BASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm22784-201ENSMUST00000104088 132 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm12304-201ENSMUST00000120312 385 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Snord13-201ENSMUST00000157627 104 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm25012-201ENSMUST00000158396 164 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm24333-201ENSMUST00000175101 84 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm27419-201ENSMUST00000184576 109 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Mir6481-201ENSMUST00000184617 110 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm37746-201ENSMUST00000193249 198 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm44483-201ENSMUST00000197203 97 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm25410-201ENSMUST00000083758 137 ntBASIC1□□□□□ -2.25
Col4a4Q9QZR9 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1□□□□□ -2.25
Col4a4Q9QZR9 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Gm12771-201ENSMUST00000120246 135 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Gm15692-201ENSMUST00000152173 352 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Gm22281-201ENSMUST00000157198 103 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Gm22215-201ENSMUST00000157558 96 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Gm28020-201ENSMUST00000157739 67 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Gm22553-201ENSMUST00000157797 295 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Gm22731-201ENSMUST00000158086 94 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Vmn1r-ps16-201ENSMUST00000204747 105 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 AC122834.1-201ENSMUST00000227182 425 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Gm25401-201ENSMUST00000082975 106 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 AC154515.1-201ENSMUST00000226085 2841 ntBASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Olfr1013-202ENSMUST00000216397 4925 ntAPPRIS P1 TSL 2 BASIC0.99□□□□□ -2.25
Col4a4Q9QZR9 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC0.98□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 149.7 ms