Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.4□□□□□ -2.19
Cpsf3Q9QXK7 Gm25627-201ENSMUST00000084003 153 ntBASIC1.4□□□□□ -2.19
Cpsf3Q9QXK7 Mir544-201ENSMUST00000103813 78 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 Gm23705-201ENSMUST00000104370 130 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 Gm12309-201ENSMUST00000119889 182 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 Gm22164-201ENSMUST00000158413 106 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 Mir3098-201ENSMUST00000175416 87 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 Gm22862-201ENSMUST00000178593 121 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 Gm22306-201ENSMUST00000082692 107 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 Gm25697-201ENSMUST00000082902 98 ntBASIC1.39□□□□□ -2.19
Cpsf3Q9QXK7 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm25424-201ENSMUST00000157612 58 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm23277-201ENSMUST00000157914 136 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm23898-201ENSMUST00000158111 103 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm24006-201ENSMUST00000158462 132 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Traj60-201ENSMUST00000167781 54 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm23967-201ENSMUST00000175062 78 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm43602-201ENSMUST00000196772 300 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm25038-201ENSMUST00000082928 130 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 AC153950.1-201ENSMUST00000219916 3238 ntBASIC1.38□□□□□ -2.19
Cpsf3Q9QXK7 Gm11857-201ENSMUST00000119817 324 ntBASIC1.37□□□□□ -2.19
Cpsf3Q9QXK7 Gm27332-201ENSMUST00000184893 112 ntBASIC1.37□□□□□ -2.19
Cpsf3Q9QXK7 Gm45859-201ENSMUST00000212794 214 ntBASIC1.37□□□□□ -2.19
Cpsf3Q9QXK7 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.37□□□□□ -2.19
Cpsf3Q9QXK7 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.37□□□□□ -2.19
Cpsf3Q9QXK7 Mir211-201ENSMUST00000083651 106 ntBASIC1.37□□□□□ -2.19
Cpsf3Q9QXK7 Mir490-201ENSMUST00000093567 84 ntBASIC1.37□□□□□ -2.19
Cpsf3Q9QXK7 Gm25495-201ENSMUST00000104431 131 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Mir881-201ENSMUST00000104844 78 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Gm13801-201ENSMUST00000120750 160 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Olfr1172-ps1-201ENSMUST00000121530 192 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Gm23339-201ENSMUST00000158962 139 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Gm23419-201ENSMUST00000175523 84 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Gm25409-201ENSMUST00000083764 131 ntBASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.36□□□□□ -2.19
Cpsf3Q9QXK7 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Gm23907-201ENSMUST00000104595 189 ntBASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Gm22559-201ENSMUST00000157329 134 ntBASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Gm23113-201ENSMUST00000158477 99 ntBASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Gm44483-201ENSMUST00000197203 97 ntBASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Gm45116-201ENSMUST00000207392 275 ntBASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.35□□□□□ -2.19
Cpsf3Q9QXK7 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 Gm24375-201ENSMUST00000104397 132 ntBASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 Gm11792-201ENSMUST00000120640 168 ntBASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 Gm11334-201ENSMUST00000121969 156 ntBASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 Gm22553-201ENSMUST00000157797 295 ntBASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 Mir5104-201ENSMUST00000175319 94 ntBASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 Gm23267-201ENSMUST00000178490 132 ntBASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 AC161426.1-201ENSMUST00000214137 286 ntBASIC1.34□□□□□ -2.19
Cpsf3Q9QXK7 Gm23466-201ENSMUST00000157133 106 ntBASIC1.33□□□□□ -2.2
Cpsf3Q9QXK7 Mir3061-201ENSMUST00000175129 91 ntBASIC1.33□□□□□ -2.2
Cpsf3Q9QXK7 Gm25750-201ENSMUST00000175483 112 ntBASIC1.33□□□□□ -2.2
Cpsf3Q9QXK7 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.33□□□□□ -2.2
Cpsf3Q9QXK7 Snord1a-201ENSMUST00000083160 74 ntBASIC1.33□□□□□ -2.2
Cpsf3Q9QXK7 Mir34a-201ENSMUST00000083559 102 ntBASIC1.33□□□□□ -2.2
Cpsf3Q9QXK7 Gm26038-201ENSMUST00000158151 106 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm16399-201ENSMUST00000181423 219 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm27326-201ENSMUST00000183504 95 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm27711-201ENSMUST00000183802 118 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Mir7665-201ENSMUST00000184907 63 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm21064-202ENSMUST00000190583 278 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm9251-201ENSMUST00000197202 628 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm23377-201ENSMUST00000082943 126 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm25141-201ENSMUST00000083177 107 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm22743-201ENSMUST00000083445 133 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.32□□□□□ -2.2
Cpsf3Q9QXK7 Mir343-201ENSMUST00000102360 75 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Gm11936-201ENSMUST00000118323 160 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Gm13797-201ENSMUST00000121792 120 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Gm23542-201ENSMUST00000158208 96 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Mir1931-201ENSMUST00000158589 119 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Gm22403-201ENSMUST00000174919 84 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Gm38183-201ENSMUST00000193189 205 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Gm37715-201ENSMUST00000193206 235 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Snord96a-201ENSMUST00000082791 81 ntBASIC1.31□□□□□ -2.2
Cpsf3Q9QXK7 Gm11204-201ENSMUST00000122438 147 ntBASIC1.3□□□□□ -2.2
Cpsf3Q9QXK7 Gm25720-201ENSMUST00000157503 105 ntBASIC1.3□□□□□ -2.2
Cpsf3Q9QXK7 Gm26029-201ENSMUST00000158659 132 ntBASIC1.3□□□□□ -2.2
Cpsf3Q9QXK7 Gm22944-201ENSMUST00000158662 133 ntBASIC1.3□□□□□ -2.2
Cpsf3Q9QXK7 Gm22663-201ENSMUST00000158721 102 ntBASIC1.3□□□□□ -2.2
Cpsf3Q9QXK7 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.3□□□□□ -2.2
Cpsf3Q9QXK7 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.3□□□□□ -2.2
Cpsf3Q9QXK7 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.3□□□□□ -2.2
Retrieved 100 of 76,532 protein–RNA pairs in 14.1 ms