Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm24431-201ENSMUST00000104073 66 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm22321-201ENSMUST00000157152 104 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm22088-201ENSMUST00000158341 117 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Mir5624-201ENSMUST00000176635 61 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Mir653-201ENSMUST00000102402 85 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm14773-201ENSMUST00000125932 451 ntTSL 2 BASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm25825-201ENSMUST00000157091 124 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm22491-201ENSMUST00000157190 102 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm23542-201ENSMUST00000158208 96 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm17919-201ENSMUST00000173344 312 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm29512-201ENSMUST00000185544 315 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm28912-201ENSMUST00000189001 234 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Mir3535-201ENSMUST00000197651 147 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm26224-201ENSMUST00000082506 80 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Mir196a-2-201ENSMUST00000083554 85 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm26111-201ENSMUST00000083969 106 ntBASIC1.1□□□□□ -2.23
Scn4aQ9ER60 Gm13560-201ENSMUST00000121865 329 ntBASIC1.09□□□□□ -2.23
Scn4aQ9ER60 Gm22403-201ENSMUST00000174919 84 ntBASIC1.09□□□□□ -2.23
Scn4aQ9ER60 Gm44468-201ENSMUST00000199516 105 ntBASIC1.09□□□□□ -2.23
Scn4aQ9ER60 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.09□□□□□ -2.23
Scn4aQ9ER60 Gm24164-201ENSMUST00000093663 104 ntBASIC1.09□□□□□ -2.23
Scn4aQ9ER60 Gm22482-201ENSMUST00000122563 359 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Mir1951-201ENSMUST00000157981 89 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Gm22114-201ENSMUST00000177756 107 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Gm37404-201ENSMUST00000195726 359 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC1.08□□□□□ -2.24
Scn4aQ9ER60 AC132437.1-201ENSMUST00000218308 320 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Gm15379-201ENSMUST00000121224 648 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Gm22559-201ENSMUST00000157329 134 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Gm26159-201ENSMUST00000158968 104 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Gm23735-201ENSMUST00000082551 134 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Gm24765-201ENSMUST00000083691 103 ntBASIC1.08□□□□□ -2.24
Scn4aQ9ER60 Gm26339-201ENSMUST00000102368 99 ntBASIC1.07□□□□□ -2.24
Scn4aQ9ER60 Mir1197-201ENSMUST00000117037 120 ntBASIC1.07□□□□□ -2.24
Scn4aQ9ER60 Gm11856-201ENSMUST00000118712 276 ntBASIC1.07□□□□□ -2.24
Scn4aQ9ER60 Gm24847-201ENSMUST00000158032 108 ntBASIC1.07□□□□□ -2.24
Scn4aQ9ER60 Gm27974-201ENSMUST00000183415 105 ntBASIC1.07□□□□□ -2.24
Scn4aQ9ER60 Gm36929-201ENSMUST00000195152 166 ntTSL 5 BASIC1.07□□□□□ -2.24
Scn4aQ9ER60 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.07□□□□□ -2.24
Scn4aQ9ER60 Gm24038-201ENSMUST00000082872 159 ntBASIC1.07□□□□□ -2.24
Scn4aQ9ER60 Gm14846-201ENSMUST00000121868 216 ntBASIC1.06□□□□□ -2.24
Scn4aQ9ER60 Gm22434-201ENSMUST00000158549 122 ntBASIC1.06□□□□□ -2.24
Scn4aQ9ER60 Mir7077-201ENSMUST00000183991 57 ntBASIC1.06□□□□□ -2.24
Scn4aQ9ER60 Gm22704-201ENSMUST00000083027 137 ntBASIC1.06□□□□□ -2.24
Scn4aQ9ER60 Gm26074-201ENSMUST00000104063 129 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm22553-201ENSMUST00000157797 295 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm24737-201ENSMUST00000158861 100 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Mir3061-201ENSMUST00000175129 91 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm25930-201ENSMUST00000082785 107 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm26495-201ENSMUST00000083152 137 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 CT030170.3-201ENSMUST00000221205 1815 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm11857-201ENSMUST00000119817 324 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm23170-201ENSMUST00000157158 106 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm26022-201ENSMUST00000158663 108 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm23020-201ENSMUST00000158766 253 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 AC173482.5-201ENSMUST00000224181 327 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Snord35a-201ENSMUST00000083884 90 ntBASIC1.05□□□□□ -2.24
Scn4aQ9ER60 Gm24283-201ENSMUST00000104233 107 ntBASIC1.04□□□□□ -2.24
Scn4aQ9ER60 Gm16265-201ENSMUST00000134558 108 ntBASIC1.04□□□□□ -2.24
Scn4aQ9ER60 Gm26038-201ENSMUST00000158151 106 ntBASIC1.04□□□□□ -2.24
Scn4aQ9ER60 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC1.04□□□□□ -2.24
Scn4aQ9ER60 Gm22242-201ENSMUST00000175224 118 ntBASIC1.04□□□□□ -2.24
Scn4aQ9ER60 Gm22448-201ENSMUST00000179254 107 ntBASIC1.04□□□□□ -2.24
Scn4aQ9ER60 Gm38060-201ENSMUST00000194822 464 ntBASIC1.04□□□□□ -2.24
Scn4aQ9ER60 Gm22785-201ENSMUST00000104087 132 ntBASIC1.03□□□□□ -2.24
Scn4aQ9ER60 Gm14761-201ENSMUST00000121363 262 ntBASIC1.03□□□□□ -2.24
Scn4aQ9ER60 Mup-ps22-201ENSMUST00000121611 243 ntBASIC1.03□□□□□ -2.24
Scn4aQ9ER60 Mir1931-201ENSMUST00000158589 119 ntBASIC1.03□□□□□ -2.24
Scn4aQ9ER60 Gm28418-201ENSMUST00000186179 423 ntBASIC1.03□□□□□ -2.24
Scn4aQ9ER60 AC115735.2-201ENSMUST00000227135 351 ntBASIC1.03□□□□□ -2.24
Scn4aQ9ER60 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC1.03□□□□□ -2.24
Scn4aQ9ER60 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.03□□□□□ -2.24
Scn4aQ9ER60 Gm24275-201ENSMUST00000116780 146 ntBASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Gm28579-201ENSMUST00000186143 369 ntBASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Gm37338-201ENSMUST00000191986 127 ntBASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Gm44352-201ENSMUST00000196358 110 ntBASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Mir7227-201ENSMUST00000200408 59 ntBASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Gm43884-201ENSMUST00000204251 559 ntBASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Gm26447-201ENSMUST00000082448 129 ntBASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Mir224-201ENSMUST00000083608 82 ntBASIC1.03□□□□□ -2.25
Scn4aQ9ER60 Gm13725-201ENSMUST00000122139 207 ntBASIC1.02□□□□□ -2.25
Scn4aQ9ER60 Gm24440-201ENSMUST00000157236 63 ntBASIC1.02□□□□□ -2.25
Scn4aQ9ER60 Gm24512-201ENSMUST00000174963 65 ntBASIC1.02□□□□□ -2.25
Scn4aQ9ER60 Gm25615-201ENSMUST00000177836 94 ntBASIC1.02□□□□□ -2.25
Scn4aQ9ER60 Gm29107-201ENSMUST00000190910 347 ntBASIC1.02□□□□□ -2.25
Scn4aQ9ER60 Gm11322-201ENSMUST00000118095 435 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm16032-201ENSMUST00000118534 168 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm12068-201ENSMUST00000153153 376 ntTSL 3 BASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm20257-202ENSMUST00000188643 130 ntBASIC1.01□□□□□ -2.25
Scn4aQ9ER60 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.01□□□□□ -2.25
Retrieved 100 of 76,532 protein–RNA pairs in 259.7 ms