Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm22963-201ENSMUST00000157960 91 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm27579-201ENSMUST00000158113 63 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm24174-201ENSMUST00000158933 111 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm43427-201ENSMUST00000198188 331 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm25627-201ENSMUST00000084003 153 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Mir301b-201ENSMUST00000102333 97 ntBASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 Gm12449-201ENSMUST00000117572 234 ntBASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 Gm6897-201ENSMUST00000117714 138 ntBASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 Gm14758-201ENSMUST00000119104 138 ntBASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 Gm22082-201ENSMUST00000157587 161 ntBASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 Gm23898-201ENSMUST00000158111 103 ntBASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 Gm23289-201ENSMUST00000175615 108 ntBASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 Gm27402-201ENSMUST00000183890 120 ntBASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Ddx28Q9CWT6 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 Gm22545-201ENSMUST00000104350 132 ntBASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 Gm22556-201ENSMUST00000157803 100 ntBASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 Mir7675-201ENSMUST00000184262 58 ntBASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 Gm44320-201ENSMUST00000199276 86 ntBASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 Mir148b-201ENSMUST00000083626 97 ntBASIC1.43□□□□□ -2.18
Ddx28Q9CWT6 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.42□□□□□ -2.18
Ddx28Q9CWT6 Gm26026-201ENSMUST00000122726 123 ntBASIC1.42□□□□□ -2.18
Ddx28Q9CWT6 Gm23170-201ENSMUST00000157158 106 ntBASIC1.42□□□□□ -2.18
Ddx28Q9CWT6 Mir1931-201ENSMUST00000158589 119 ntBASIC1.42□□□□□ -2.18
Ddx28Q9CWT6 Gm27476-201ENSMUST00000183366 104 ntBASIC1.42□□□□□ -2.18
Ddx28Q9CWT6 Gm28409-201ENSMUST00000187064 103 ntBASIC1.42□□□□□ -2.18
Ddx28Q9CWT6 Gm38183-201ENSMUST00000193189 205 ntBASIC1.42□□□□□ -2.18
Ddx28Q9CWT6 Gm22306-201ENSMUST00000082692 107 ntBASIC1.42□□□□□ -2.18
Ddx28Q9CWT6 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm25538-201ENSMUST00000101943 107 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm24375-201ENSMUST00000104397 132 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm26004-201ENSMUST00000158804 116 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm27585-201ENSMUST00000183717 199 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm18433-201ENSMUST00000192747 197 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm22744-201ENSMUST00000083444 65 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm24522-201ENSMUST00000083964 108 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.41□□□□□ -2.18
Ddx28Q9CWT6 Snord19-201ENSMUST00000104609 76 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Gm24262-201ENSMUST00000157431 144 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Gm22586-201ENSMUST00000157507 122 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Gm25015-201ENSMUST00000158400 128 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Gm23113-201ENSMUST00000158477 99 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Gm24229-201ENSMUST00000158830 118 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Gm24638-201ENSMUST00000179807 132 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 CT485608.2-201ENSMUST00000227210 291 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Snord14a-201ENSMUST00000082807 87 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Gm25697-201ENSMUST00000082902 98 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Mir490-201ENSMUST00000093567 84 ntBASIC1.4□□□□□ -2.19
Ddx28Q9CWT6 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Gm24867-201ENSMUST00000104161 107 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Gm25783-201ENSMUST00000122525 190 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Gm26468-201ENSMUST00000158644 106 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Gm44052-201ENSMUST00000203382 396 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Gm36189-201ENSMUST00000204113 523 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Gm22743-201ENSMUST00000083445 133 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Mir34a-201ENSMUST00000083559 102 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.39□□□□□ -2.19
Ddx28Q9CWT6 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 Gm22051-201ENSMUST00000117002 127 ntBASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 Gm23542-201ENSMUST00000158208 96 ntBASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 Gm43602-201ENSMUST00000196772 300 ntBASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 Gm25038-201ENSMUST00000082928 130 ntBASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 Mir146-201ENSMUST00000083667 65 ntBASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.38□□□□□ -2.19
Ddx28Q9CWT6 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Gm15115-201ENSMUST00000121145 264 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Gm24677-201ENSMUST00000158755 150 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Gm7258-201ENSMUST00000179317 300 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Gm25936-201ENSMUST00000179952 114 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Gm44483-201ENSMUST00000197203 97 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Gm44057-201ENSMUST00000204547 96 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Mir384-201ENSMUST00000083565 88 ntBASIC1.37□□□□□ -2.19
Ddx28Q9CWT6 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Mir544-201ENSMUST00000103813 78 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Gm25938-201ENSMUST00000104139 166 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Gm11334-201ENSMUST00000121969 156 ntBASIC1.36□□□□□ -2.19
Ddx28Q9CWT6 Gm22228-201ENSMUST00000157364 101 ntBASIC1.36□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 173.7 ms