Protein–RNA interactions for Protein: Q9CU62

Smc1a, Structural maintenance of chromosomes protein 1A, mousemouse

Known RBP Predictions only

Length 1,233 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1aQ9CU62 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Gm26089-201ENSMUST00000157898 107 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Gm26213-201ENSMUST00000158582 110 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Gm23182-201ENSMUST00000158688 135 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Gm2962-201ENSMUST00000159266 336 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Mir3061-201ENSMUST00000175129 91 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Mir6985-201ENSMUST00000184641 61 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Gm44373-201ENSMUST00000196112 169 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Gm42719-201ENSMUST00000197393 355 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Gm44490-201ENSMUST00000198566 127 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Gm22248-201ENSMUST00000082482 150 ntBASIC1.25□□□□□ -2.21
Smc1aQ9CU62 Snhg14-211ENSMUST00000189581 6861 ntTSL 1 (best) BASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Gm24342-201ENSMUST00000103907 104 ntBASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Gm25875-201ENSMUST00000104323 107 ntBASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Gm25715-201ENSMUST00000158627 125 ntBASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Gm22565-201ENSMUST00000175540 69 ntBASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Gm27521-201ENSMUST00000184022 64 ntBASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Snora41-201ENSMUST00000082668 132 ntBASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Gm26497-201ENSMUST00000083146 107 ntBASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Mir200b-201ENSMUST00000083615 70 ntBASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.24□□□□□ -2.21
Smc1aQ9CU62 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Gm22477-201ENSMUST00000122569 316 ntBASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Gm22984-201ENSMUST00000122751 122 ntBASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Gm25663-201ENSMUST00000157698 135 ntBASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Mir5104-201ENSMUST00000175319 94 ntBASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Gm29014-201ENSMUST00000191422 326 ntBASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Gm9795-201ENSMUST00000062156 693 ntBASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Gm26224-201ENSMUST00000082506 80 ntBASIC1.23□□□□□ -2.21
Smc1aQ9CU62 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Gm22233-201ENSMUST00000157464 114 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Gm25868-201ENSMUST00000158253 114 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Mir7663-201ENSMUST00000183950 61 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Mir7091-201ENSMUST00000184075 79 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Gm20923-201ENSMUST00000190009 319 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Gm21088-201ENSMUST00000190875 316 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Gm44458-201ENSMUST00000196594 143 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Gm45313-201ENSMUST00000210584 178 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Gm24204-201ENSMUST00000082950 107 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Mir344-201ENSMUST00000083634 95 ntBASIC1.22□□□□□ -2.21
Smc1aQ9CU62 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Smc1aQ9CU62 n-R5s67-201ENSMUST00000104336 114 ntBASIC1.21□□□□□ -2.22
Smc1aQ9CU62 Gm14846-201ENSMUST00000121868 216 ntBASIC1.21□□□□□ -2.22
Smc1aQ9CU62 Gm24777-201ENSMUST00000157644 107 ntBASIC1.21□□□□□ -2.22
Smc1aQ9CU62 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.21□□□□□ -2.22
Smc1aQ9CU62 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.21□□□□□ -2.22
Smc1aQ9CU62 AC133083.2-201ENSMUST00000222826 272 ntTSL 5 BASIC1.21□□□□□ -2.22
Smc1aQ9CU62 Gm25128-201ENSMUST00000083339 76 ntBASIC1.21□□□□□ -2.22
Smc1aQ9CU62 Gm23705-201ENSMUST00000104370 130 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Gm24808-201ENSMUST00000157993 118 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Gm23579-201ENSMUST00000158528 103 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Gm22403-201ENSMUST00000174919 84 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Gm22118-201ENSMUST00000175593 171 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Gm6105-201ENSMUST00000200580 624 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 CT025630.1-201ENSMUST00000227901 172 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Olfr832-202ENSMUST00000218385 4435 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Smc1aQ9CU62 Gm11904-201ENSMUST00000120562 248 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 Gm24595-201ENSMUST00000122501 110 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 Gm21954-201ENSMUST00000179544 51 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Smc1aQ9CU62 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
Smc1aQ9CU62 Gm29140-201ENSMUST00000190187 476 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 Gm44325-201ENSMUST00000196757 77 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 Gm44055-201ENSMUST00000204376 247 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 Gm44959-201ENSMUST00000209127 231 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 Gm45268-201ENSMUST00000210046 370 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.19□□□□□ -2.22
Smc1aQ9CU62 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm15379-201ENSMUST00000121224 648 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm25825-201ENSMUST00000157091 124 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm23101-201ENSMUST00000157550 137 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm23106-201ENSMUST00000157554 101 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm26402-201ENSMUST00000158499 113 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm25615-201ENSMUST00000177836 94 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm27419-201ENSMUST00000184576 109 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm43602-201ENSMUST00000196772 300 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm22571-201ENSMUST00000082984 70 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm22421-201ENSMUST00000083058 107 ntBASIC1.18□□□□□ -2.22
Smc1aQ9CU62 Gm25506-201ENSMUST00000104339 70 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm11322-201ENSMUST00000118095 435 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm12837-201ENSMUST00000120131 373 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm22097-201ENSMUST00000157929 278 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm24221-201ENSMUST00000158833 313 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm27905-201ENSMUST00000184005 207 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 Gm19572-201ENSMUST00000214326 338 ntBASIC1.17□□□□□ -2.22
Smc1aQ9CU62 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 199 ms