Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm25558-201ENSMUST00000158083 106 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm23194-201ENSMUST00000158813 105 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm16404-201ENSMUST00000177739 468 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm14598-201ENSMUST00000180109 468 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm14625-201ENSMUST00000180231 468 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm27997-201ENSMUST00000184942 69 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm44948-201ENSMUST00000209050 149 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm18188-201ENSMUST00000219386 478 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Mir19b-2-201ENSMUST00000083539 84 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Snord33-201ENSMUST00000083694 84 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm23845-201ENSMUST00000083834 152 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 CT030170.3-201ENSMUST00000221205 1815 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Olfr1169-ps1-201ENSMUST00000121437 233 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Gm24385-201ENSMUST00000122694 350 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Gm25968-201ENSMUST00000157167 100 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Mir1961-201ENSMUST00000158643 112 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Mir15a-201ENSMUST00000175266 84 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Mir3070a-201ENSMUST00000175468 89 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Gm23289-201ENSMUST00000175615 108 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Gm38109-201ENSMUST00000195386 181 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Gm24204-201ENSMUST00000082950 107 ntBASIC0.48□□□□□ -2.33
RTRAFQ9CQE8 Zfp981-203ENSMUST00000179175 2953 ntAPPRIS P1 TSL 2 BASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm24579-201ENSMUST00000103964 144 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm24275-201ENSMUST00000116780 146 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm24909-201ENSMUST00000157290 280 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm26358-201ENSMUST00000158215 97 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm22200-201ENSMUST00000158614 67 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm24345-201ENSMUST00000158706 124 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm22914-201ENSMUST00000175195 77 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm28211-201ENSMUST00000190920 315 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm44959-201ENSMUST00000209127 231 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm45508-201ENSMUST00000209298 299 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm22421-201ENSMUST00000083058 107 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Rps24-ps2-201ENSMUST00000091375 395 ntBASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.47□□□□□ -2.33
RTRAFQ9CQE8 Gm24678-201ENSMUST00000158756 104 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 Gm26073-201ENSMUST00000179906 127 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 Gm23186-201ENSMUST00000180078 107 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 Gm28435-201ENSMUST00000185496 108 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 Gm28669-201ENSMUST00000188400 100 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 Gm20923-201ENSMUST00000190009 319 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 Gm21088-201ENSMUST00000190875 316 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 Gm36956-201ENSMUST00000193830 214 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 AC163646.2-201ENSMUST00000227962 141 ntBASIC0.46□□□□□ -2.34
RTRAFQ9CQE8 Gm23766-201ENSMUST00000103894 80 ntBASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Vmn1r-ps125-201ENSMUST00000117767 290 ntBASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Gm22984-201ENSMUST00000122751 122 ntBASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Gm12869-201ENSMUST00000156265 344 ntTSL 2 BASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Gm24501-201ENSMUST00000158452 62 ntBASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Mir3079-201ENSMUST00000175428 90 ntBASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Gm25615-201ENSMUST00000177836 94 ntBASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Mir6350-201ENSMUST00000183639 105 ntBASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Gm34302-201ENSMUST00000192926 243 ntAPPRIS P1 TSL 5 BASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 DQ267101-201ENSMUST00000082562 73 ntBASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC0.45□□□□□ -2.34
RTRAFQ9CQE8 Mir759-201ENSMUST00000103254 98 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Gm23203-201ENSMUST00000104374 107 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Snord89-201ENSMUST00000104516 110 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Gm22097-201ENSMUST00000157929 278 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Gm24000-201ENSMUST00000158063 89 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Gm22163-201ENSMUST00000158408 135 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Mir3109-201ENSMUST00000175301 88 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Gm29665-201ENSMUST00000191457 528 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Gm45471-201ENSMUST00000211270 281 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 AC159896.1-201ENSMUST00000215264 215 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 AC124196.2-201ENSMUST00000224835 145 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Snora19-201ENSMUST00000082962 132 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Gm23658-201ENSMUST00000083233 132 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Mir324-201ENSMUST00000083600 89 ntBASIC0.44□□□□□ -2.34
RTRAFQ9CQE8 Gm13725-201ENSMUST00000122139 207 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm27723-201ENSMUST00000157398 63 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm24015-201ENSMUST00000157725 232 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm24880-201ENSMUST00000158776 85 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm25838-201ENSMUST00000158920 120 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Snora24-201ENSMUST00000174989 130 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm24154-201ENSMUST00000175261 130 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm26236-201ENSMUST00000175536 137 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Mir7665-201ENSMUST00000184907 63 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm37404-201ENSMUST00000195726 359 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 mt-Tm-201ENSMUST00000082395 69 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm22283-201ENSMUST00000082556 161 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm22302-201ENSMUST00000082657 106 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Mir451a-201ENSMUST00000093557 72 ntBASIC0.43□□□□□ -2.34
RTRAFQ9CQE8 Gm37824-201ENSMUST00000193430 3236 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm22786-201ENSMUST00000104086 122 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm22321-201ENSMUST00000157152 104 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm22796-201ENSMUST00000157234 106 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm23329-201ENSMUST00000157415 108 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm26482-201ENSMUST00000158015 62 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm16539-201ENSMUST00000160086 327 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm27326-201ENSMUST00000183504 95 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm28849-201ENSMUST00000188127 174 ntBASIC0.42□□□□□ -2.34
RTRAFQ9CQE8 Gm45616-201ENSMUST00000211711 319 ntBASIC0.42□□□□□ -2.34
Retrieved 100 of 76,532 protein–RNA pairs in 155.8 ms