Protein–RNA interactions for Protein: Q9CQ71

Rpa3, Replication protein A 14 kDa subunit, mousemouse

Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpa3Q9CQ71 Gm23097-201ENSMUST00000083448 105 ntBASIC0.1□□□□□ -2.39
Rpa3Q9CQ71 Mir1197-201ENSMUST00000117037 120 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm15899-201ENSMUST00000128586 238 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm24909-201ENSMUST00000157290 280 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm23182-201ENSMUST00000158688 135 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Mir3108-201ENSMUST00000175500 79 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm23660-201ENSMUST00000178362 79 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm24088-201ENSMUST00000179100 79 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Mir8116-201ENSMUST00000184134 97 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm25930-201ENSMUST00000082785 107 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm24527-201ENSMUST00000082920 107 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm24164-201ENSMUST00000093663 104 ntBASIC0.09□□□□□ -2.4
Rpa3Q9CQ71 Gm24375-201ENSMUST00000104397 132 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Gm24000-201ENSMUST00000158063 89 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Scarna8-201ENSMUST00000158333 131 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Mir1933-201ENSMUST00000158930 88 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Gm22801-201ENSMUST00000175624 84 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Gm23191-201ENSMUST00000179147 107 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Gm27410-201ENSMUST00000183851 115 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Mir7j-201ENSMUST00000184427 122 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Gm6105-201ENSMUST00000200580 624 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Gm45508-201ENSMUST00000209298 299 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Gm22248-201ENSMUST00000082482 150 ntBASIC0.08□□□□□ -2.4
Rpa3Q9CQ71 Olfr1099-202ENSMUST00000213456 4867 ntAPPRIS P1 TSL 5 BASIC0.07□□□□□ -2.4
Rpa3Q9CQ71 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.07□□□□□ -2.4
Rpa3Q9CQ71 Gm24015-201ENSMUST00000157725 232 ntBASIC0.07□□□□□ -2.4
Rpa3Q9CQ71 Gm25718-201ENSMUST00000158632 118 ntBASIC0.07□□□□□ -2.4
Rpa3Q9CQ71 Gm15446-203ENSMUST00000170826 192 ntTSL 5 BASIC0.07□□□□□ -2.4
Rpa3Q9CQ71 AC126554.1-201ENSMUST00000222161 271 ntBASIC0.07□□□□□ -2.4
Rpa3Q9CQ71 Gm24208-201ENSMUST00000082783 135 ntBASIC0.07□□□□□ -2.4
Rpa3Q9CQ71 Mir200b-201ENSMUST00000083615 70 ntBASIC0.07□□□□□ -2.4
Rpa3Q9CQ71 AC159625.1-201ENSMUST00000220994 2625 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm23142-201ENSMUST00000101848 105 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm26240-201ENSMUST00000101893 105 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Ighv1-47-201ENSMUST00000103518 294 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm15289-201ENSMUST00000117793 244 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm23838-201ENSMUST00000158067 162 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm25558-201ENSMUST00000158083 106 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm23761-201ENSMUST00000158347 104 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm23759-201ENSMUST00000158351 268 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Scarna3a-201ENSMUST00000158911 140 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm22239-201ENSMUST00000175220 103 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm25952-201ENSMUST00000175329 74 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm28648-201ENSMUST00000190092 343 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm9227-201ENSMUST00000194733 566 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 mt-Atp6-201ENSMUST00000082408 681 ntAPPRIS P1 BASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Mir30a-201ENSMUST00000083471 71 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm23039-201ENSMUST00000083870 161 ntBASIC0.06□□□□□ -2.4
Rpa3Q9CQ71 Gm14400-201ENSMUST00000117234 2135 ntBASIC0.05□□□□□ -2.4
Rpa3Q9CQ71 Gm12225-201ENSMUST00000117995 298 ntBASIC0.05□□□□□ -2.4
Rpa3Q9CQ71 Gm25633-201ENSMUST00000178565 107 ntBASIC0.05□□□□□ -2.4
Rpa3Q9CQ71 Gm44352-201ENSMUST00000196358 110 ntBASIC0.05□□□□□ -2.4
Rpa3Q9CQ71 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC0.05□□□□□ -2.4
Rpa3Q9CQ71 Gm22294-201ENSMUST00000083308 104 ntBASIC0.05□□□□□ -2.4
Rpa3Q9CQ71 Gm24116-201ENSMUST00000103975 107 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 Gm25781-201ENSMUST00000122527 84 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 Gm27402-201ENSMUST00000183890 120 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 Gm44811-201ENSMUST00000209120 228 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 Gm19572-201ENSMUST00000214326 338 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 AC102369.1-201ENSMUST00000218415 373 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 AC116589.1-201ENSMUST00000220634 327 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 Gm23625-201ENSMUST00000082457 100 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 Gm24037-201ENSMUST00000082871 180 ntBASIC0.04□□□□□ -2.4
Rpa3Q9CQ71 Gm16186-201ENSMUST00000120132 216 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm25052-201ENSMUST00000122661 158 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm23665-201ENSMUST00000158054 62 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm24345-201ENSMUST00000158706 124 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm23194-201ENSMUST00000158813 105 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm25300-201ENSMUST00000175284 84 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm23148-201ENSMUST00000180367 107 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 AC211878.4-201ENSMUST00000220970 262 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 CT485612.2-201ENSMUST00000223014 151 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm23627-201ENSMUST00000082459 107 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm22502-201ENSMUST00000082488 107 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm22977-201ENSMUST00000082615 107 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm24149-201ENSMUST00000082757 107 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm25258-201ENSMUST00000083049 107 ntBASIC0.03□□□□□ -2.4
Rpa3Q9CQ71 Gm22883-201ENSMUST00000157376 106 ntBASIC0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm45616-201ENSMUST00000211711 319 ntBASIC0.02□□□□□ -2.41
Rpa3Q9CQ71 Gm23492-201ENSMUST00000116837 115 ntBASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 Gm25102-201ENSMUST00000122479 112 ntBASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 Gm23921-201ENSMUST00000175258 107 ntBASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 Mir7661-201ENSMUST00000197023 61 ntBASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 Gm45471-201ENSMUST00000211270 281 ntBASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 Gm25814-201ENSMUST00000082754 107 ntBASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 Mir451a-201ENSMUST00000093557 72 ntBASIC0.01□□□□□ -2.41
Rpa3Q9CQ71 Snord69-201ENSMUST00000104024 80 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm25878-201ENSMUST00000104327 93 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm26073-201ENSMUST00000179906 127 ntBASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm10421-202ENSMUST00000186114 132 ntTSL 3 BASIC0□□□□□ -2.41
Rpa3Q9CQ71 Gm37808-201ENSMUST00000192038 442 ntTSL 5 BASIC0□□□□□ -2.41
Rpa3Q9CQ71 Mir6896-201ENSMUST00000198033 73 ntBASIC0□□□□□ -2.41
Retrieved 100 of 76,532 protein–RNA pairs in 181.3 ms