Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Gm22750-201ENSMUST00000102076 103 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Gm23980-201ENSMUST00000157135 158 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Gm24717-201ENSMUST00000157522 124 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Gm22664-201ENSMUST00000158719 105 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Mir7039-201ENSMUST00000183852 85 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Gm44464-201ENSMUST00000198010 138 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Gm22828-201ENSMUST00000083768 107 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Gm24449-201ENSMUST00000083985 106 ntBASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.49□□□□□ -2.01
Pcdha1Q91Y21 Gm26015-201ENSMUST00000104402 125 ntBASIC2.48□□□□□ -2.01
Pcdha1Q91Y21 Gm24210-201ENSMUST00000158263 133 ntBASIC2.48□□□□□ -2.01
Pcdha1Q91Y21 Mir1931-201ENSMUST00000158589 119 ntBASIC2.48□□□□□ -2.01
Pcdha1Q91Y21 Gm23548-201ENSMUST00000158963 106 ntBASIC2.48□□□□□ -2.01
Pcdha1Q91Y21 Gm28669-201ENSMUST00000188400 100 ntBASIC2.48□□□□□ -2.01
Pcdha1Q91Y21 Gm19855-201ENSMUST00000210145 249 ntBASIC2.48□□□□□ -2.01
Pcdha1Q91Y21 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.48□□□□□ -2.01
Pcdha1Q91Y21 Gm24171-201ENSMUST00000104126 131 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm22486-201ENSMUST00000116815 137 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm24559-201ENSMUST00000157519 121 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm23044-201ENSMUST00000157891 100 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm24668-201ENSMUST00000158935 104 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm3724-201ENSMUST00000197957 349 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm43381-201ENSMUST00000198553 165 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm43626-201ENSMUST00000198575 162 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm8219-201ENSMUST00000218309 242 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm22681-201ENSMUST00000083853 106 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Pak3-210ENSMUST00000172330 8135 ntAPPRIS P3 TSL 1 (best) BASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Gm43540-201ENSMUST00000196320 3848 ntBASIC2.47□□□□□ -2.01
Pcdha1Q91Y21 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm26074-201ENSMUST00000104063 129 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm24280-201ENSMUST00000104237 134 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm14917-201ENSMUST00000118872 2105 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm23898-201ENSMUST00000158111 103 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm22768-201ENSMUST00000158366 153 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm22163-201ENSMUST00000158408 135 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Mir6388-201ENSMUST00000184417 75 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm18665-201ENSMUST00000189783 270 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm44325-201ENSMUST00000196757 77 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm23370-201ENSMUST00000199545 130 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Olfr880-ps1-201ENSMUST00000212344 229 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm25797-201ENSMUST00000082640 107 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Gm25788-201ENSMUST00000082721 131 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Mir34a-201ENSMUST00000083559 102 ntBASIC2.46□□□□□ -2.02
Pcdha1Q91Y21 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Tlr7-202ENSMUST00000112161 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 n-R5s187-201ENSMUST00000122769 111 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm22790-201ENSMUST00000157229 129 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm22227-201ENSMUST00000157356 259 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm24851-201ENSMUST00000158028 103 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm22011-201ENSMUST00000158790 123 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm23567-201ENSMUST00000178005 107 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Mir6353-201ENSMUST00000183596 113 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm27399-201ENSMUST00000184250 78 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm44555-201ENSMUST00000209008 148 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm45791-201ENSMUST00000212908 352 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 AC127578.1-201ENSMUST00000227289 93 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm24616-201ENSMUST00000083274 139 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Snora33-201ENSMUST00000093556 129 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 AC123052.1-201ENSMUST00000220604 4616 ntBASIC2.45□□□□□ -2.02
Pcdha1Q91Y21 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Gm25558-201ENSMUST00000158083 106 ntBASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Gm22666-201ENSMUST00000158717 164 ntBASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Gm44358-201ENSMUST00000196301 98 ntBASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Gm20083-201ENSMUST00000205849 751 ntTSL 3 BASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 AC129202.1-201ENSMUST00000224895 526 ntBASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Gm23445-201ENSMUST00000082800 107 ntBASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Gm25628-201ENSMUST00000084002 105 ntBASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Gm13212-202ENSMUST00000105739 3595 ntAPPRIS P1 TSL 5 BASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.44□□□□□ -2.02
Pcdha1Q91Y21 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC2.43□□□□□ -2.02
Pcdha1Q91Y21 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.43□□□□□ -2.02
Pcdha1Q91Y21 Gm22517-201ENSMUST00000158265 136 ntBASIC2.43□□□□□ -2.02
Pcdha1Q91Y21 Gm23005-201ENSMUST00000158950 136 ntBASIC2.43□□□□□ -2.02
Pcdha1Q91Y21 Gm44477-201ENSMUST00000199661 110 ntBASIC2.43□□□□□ -2.02
Pcdha1Q91Y21 AC132384.11-201ENSMUST00000219676 178 ntBASIC2.43□□□□□ -2.02
Pcdha1Q91Y21 Gm25588-201ENSMUST00000082501 140 ntBASIC2.43□□□□□ -2.02
Pcdha1Q91Y21 Gm24705-201ENSMUST00000082808 107 ntBASIC2.43□□□□□ -2.02
Pcdha1Q91Y21 AC152979.2-201ENSMUST00000219702 3814 ntBASIC2.42□□□□□ -2.02
Pcdha1Q91Y21 Gm25879-201ENSMUST00000104330 107 ntBASIC2.42□□□□□ -2.02
Pcdha1Q91Y21 Gm14626-201ENSMUST00000117619 216 ntBASIC2.42□□□□□ -2.02
Pcdha1Q91Y21 Gm11644-201ENSMUST00000119735 150 ntBASIC2.42□□□□□ -2.02
Pcdha1Q91Y21 Gm24261-201ENSMUST00000083744 104 ntBASIC2.42□□□□□ -2.02
Pcdha1Q91Y21 Gm7173-205ENSMUST00000197180 9412 ntAPPRIS ALT2 TSL 5 BASIC2.42□□□□□ -2.02
Pcdha1Q91Y21 Olfr1437-202ENSMUST00000207241 3751 ntAPPRIS P1 TSL 2 BASIC2.41□□□□□ -2.02
Pcdha1Q91Y21 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Pcdha1Q91Y21 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.41□□□□□ -2.02
Pcdha1Q91Y21 Gm23551-201ENSMUST00000116852 121 ntBASIC2.41□□□□□ -2.02
Pcdha1Q91Y21 Gm25060-201ENSMUST00000157374 130 ntBASIC2.41□□□□□ -2.02
Pcdha1Q91Y21 Gm24747-201ENSMUST00000157835 87 ntBASIC2.41□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 134.4 ms