Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Gm34783-201ENSMUST00000209159 303 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 AC145736.2-201ENSMUST00000216305 365 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm24375-201ENSMUST00000104397 132 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm14884-201ENSMUST00000120456 196 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm25827-201ENSMUST00000157089 107 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm26401-201ENSMUST00000158502 76 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23474-201ENSMUST00000158884 75 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm22914-201ENSMUST00000175195 77 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Mir3079-201ENSMUST00000175428 90 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23793-201ENSMUST00000179396 117 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm27289-201ENSMUST00000183341 82 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm7654-201ENSMUST00000186738 683 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm28256-201ENSMUST00000188953 139 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm28559-201ENSMUST00000190532 139 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Olfr515-ps1-201ENSMUST00000208389 189 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm44948-201ENSMUST00000209050 149 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Mir324-201ENSMUST00000083600 89 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm24258-201ENSMUST00000083739 133 ntBASIC0.33□□□□□ -2.36
Ccdc28aQ8CEI3 Gm13711-201ENSMUST00000119708 453 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm14980-201ENSMUST00000121247 736 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm24630-201ENSMUST00000122768 106 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm13625-201ENSMUST00000149283 480 ntTSL 5 BASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm26152-201ENSMUST00000157427 101 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm22200-201ENSMUST00000158614 67 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Mir465d-201ENSMUST00000196314 58 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm25820-201ENSMUST00000198589 127 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm44149-201ENSMUST00000204256 226 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23377-201ENSMUST00000082943 126 ntBASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.32□□□□□ -2.36
Ccdc28aQ8CEI3 Gm42606-201ENSMUST00000114209 239 ntBASIC0.31□□□□□ -2.36
Ccdc28aQ8CEI3 Gm25970-201ENSMUST00000157165 86 ntBASIC0.31□□□□□ -2.36
Ccdc28aQ8CEI3 Gm24847-201ENSMUST00000158032 108 ntBASIC0.31□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23665-201ENSMUST00000158054 62 ntBASIC0.31□□□□□ -2.36
Ccdc28aQ8CEI3 Gm25838-201ENSMUST00000158920 120 ntBASIC0.31□□□□□ -2.36
Ccdc28aQ8CEI3 Gm10772-201ENSMUST00000167981 255 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
Ccdc28aQ8CEI3 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.31□□□□□ -2.36
Ccdc28aQ8CEI3 AC122298.1-201ENSMUST00000222574 165 ntTSL 5 BASIC0.31□□□□□ -2.36
Ccdc28aQ8CEI3 Gm12647-201ENSMUST00000118977 265 ntBASIC0.3□□□□□ -2.36
Ccdc28aQ8CEI3 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.3□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23584-201ENSMUST00000157655 129 ntBASIC0.3□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23262-201ENSMUST00000158323 168 ntBASIC0.3□□□□□ -2.36
Ccdc28aQ8CEI3 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.3□□□□□ -2.36
Ccdc28aQ8CEI3 AC132437.1-201ENSMUST00000218308 320 ntBASIC0.3□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23969-201ENSMUST00000083324 74 ntBASIC0.3□□□□□ -2.36
Ccdc28aQ8CEI3 Gm26474-201ENSMUST00000116762 122 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm26303-201ENSMUST00000116845 119 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm15002-201ENSMUST00000118406 452 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm11834-201ENSMUST00000122257 585 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm24909-201ENSMUST00000157290 280 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23101-201ENSMUST00000157550 137 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm25982-201ENSMUST00000157920 101 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23194-201ENSMUST00000158813 105 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm22114-201ENSMUST00000177756 107 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Trgj4-201ENSMUST00000184430 61 ntAPPRIS P1 BASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm44488-201ENSMUST00000199467 119 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm29818-201ENSMUST00000218070 165 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 AC113441.1-201ENSMUST00000223464 134 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 CT025603.4-201ENSMUST00000225777 413 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23039-201ENSMUST00000083870 161 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm22365-201ENSMUST00000093750 117 ntBASIC0.29□□□□□ -2.36
Ccdc28aQ8CEI3 Gm44560-201ENSMUST00000207816 3115 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm22786-201ENSMUST00000104086 122 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm14298-201ENSMUST00000139032 237 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm16356-201ENSMUST00000143300 169 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm25393-201ENSMUST00000157336 285 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23779-201ENSMUST00000157938 64 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm24498-201ENSMUST00000158445 102 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm24345-201ENSMUST00000158706 124 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm22565-201ENSMUST00000175540 69 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm28489-201ENSMUST00000186655 316 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm43976-201ENSMUST00000203637 235 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm44828-201ENSMUST00000203745 106 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm44687-201ENSMUST00000204975 235 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm45508-201ENSMUST00000209298 299 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 AC153930.1-201ENSMUST00000220016 358 ntTSL 3 BASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm22283-201ENSMUST00000082556 161 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Rny3-201ENSMUST00000083011 102 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Gm26326-201ENSMUST00000083070 129 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Mir101a-201ENSMUST00000083517 83 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Mir500-201ENSMUST00000093600 92 ntBASIC0.28□□□□□ -2.36
Ccdc28aQ8CEI3 Snord89-201ENSMUST00000104516 110 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Gm24629-201ENSMUST00000122762 89 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Gm23536-201ENSMUST00000157541 134 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Gm24192-201ENSMUST00000157978 145 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Gm25558-201ENSMUST00000158083 106 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Gm24880-201ENSMUST00000158776 85 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Mir7093-201ENSMUST00000184195 101 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Gm44410-201ENSMUST00000203151 341 ntTSL 3 BASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Gm25937-201ENSMUST00000083912 107 ntBASIC0.27□□□□□ -2.37
Ccdc28aQ8CEI3 Gm25773-201ENSMUST00000116718 127 ntBASIC0.26□□□□□ -2.37
Retrieved 100 of 76,532 protein–RNA pairs in 143.6 ms