Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Gm43602-201ENSMUST00000196772 300 ntBASIC2.55□□□□□ -2
Ccdc116Q80X53 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.55□□□□□ -2
Ccdc116Q80X53 Gm34314-201ENSMUST00000203622 367 ntBASIC2.55□□□□□ -2
Ccdc116Q80X53 Rex2-201ENSMUST00000075775 3993 ntAPPRIS P1 TSL 2 BASIC2.55□□□□□ -2
Ccdc116Q80X53 Gm22154-201ENSMUST00000083844 131 ntBASIC2.55□□□□□ -2
Ccdc116Q80X53 Zfp280c-202ENSMUST00000076635 4355 ntAPPRIS P3 TSL 1 (best) BASIC2.55□□□□□ -2
Ccdc116Q80X53 Olfr1151-202ENSMUST00000217376 2866 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Ccdc116Q80X53 Gm23128-201ENSMUST00000104257 132 ntBASIC2.54□□□□□ -2
Ccdc116Q80X53 Gm24068-201ENSMUST00000104513 132 ntBASIC2.54□□□□□ -2
Ccdc116Q80X53 Gm14671-201ENSMUST00000121790 262 ntBASIC2.54□□□□□ -2
Ccdc116Q80X53 Gm22790-201ENSMUST00000157229 129 ntBASIC2.54□□□□□ -2
Ccdc116Q80X53 Gm23044-201ENSMUST00000157891 100 ntBASIC2.54□□□□□ -2
Ccdc116Q80X53 Gm37807-201ENSMUST00000194310 190 ntBASIC2.54□□□□□ -2
Ccdc116Q80X53 Gm23128-202ENSMUST00000196578 133 ntBASIC2.54□□□□□ -2
Ccdc116Q80X53 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.54□□□□□ -2
Ccdc116Q80X53 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.54□□□□□ -2
Ccdc116Q80X53 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Gm11644-201ENSMUST00000119735 150 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Gm11334-201ENSMUST00000121969 156 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Gm25945-201ENSMUST00000122484 135 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Gm26214-201ENSMUST00000158581 107 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Gm23504-201ENSMUST00000158988 95 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Gm23268-201ENSMUST00000175494 78 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Mir151-201ENSMUST00000083678 68 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Gm24449-201ENSMUST00000083985 106 ntBASIC2.53□□□□□ -2
Ccdc116Q80X53 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC2.53□□□□□ -2
Ccdc116Q80X53 Mir92-1-201ENSMUST00000102108 80 ntBASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Gm24475-201ENSMUST00000157435 143 ntBASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Gm24747-201ENSMUST00000157835 87 ntBASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Mir6916-201ENSMUST00000184514 63 ntBASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Mir7050-201ENSMUST00000184636 60 ntBASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Gm29604-201ENSMUST00000187176 163 ntBASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Gm24410-201ENSMUST00000083433 107 ntBASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Zfp638-212ENSMUST00000203891 3968 ntAPPRIS ALT2 TSL 5 BASIC2.52□□□□□ -2.01
Ccdc116Q80X53 Gm22674-201ENSMUST00000104413 131 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Mir1195-201ENSMUST00000116818 98 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm14502-201ENSMUST00000118154 113 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm14709-201ENSMUST00000121225 304 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm23600-201ENSMUST00000157260 71 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm26415-201ENSMUST00000157673 292 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm43898-201ENSMUST00000204456 424 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm45544-201ENSMUST00000211130 88 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm18346-201ENSMUST00000216782 325 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm23303-201ENSMUST00000082714 152 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Gm23445-201ENSMUST00000082800 107 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Snora3-201ENSMUST00000083082 132 ntBASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Vmn1r185-208ENSMUST00000228004 5682 ntAPPRIS P1 BASIC2.51□□□□□ -2.01
Ccdc116Q80X53 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Mir466k-201ENSMUST00000116774 122 ntBASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC2.5□□□□□ -2.01
Ccdc116Q80X53 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Gm24705-201ENSMUST00000082808 107 ntBASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Gm24616-201ENSMUST00000083274 139 ntBASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Mir490-201ENSMUST00000093567 84 ntBASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
Ccdc116Q80X53 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.49□□□□□ -2.01
Ccdc116Q80X53 Mir1949-201ENSMUST00000157434 141 ntBASIC2.49□□□□□ -2.01
Ccdc116Q80X53 Gm25771-201ENSMUST00000158565 144 ntBASIC2.49□□□□□ -2.01
Ccdc116Q80X53 Gm25994-201ENSMUST00000175392 101 ntBASIC2.49□□□□□ -2.01
Ccdc116Q80X53 Mir7014-201ENSMUST00000183853 63 ntBASIC2.49□□□□□ -2.01
Ccdc116Q80X53 n-R5s40-201ENSMUST00000082475 124 ntBASIC2.49□□□□□ -2.01
Ccdc116Q80X53 Gm22743-201ENSMUST00000083445 133 ntBASIC2.49□□□□□ -2.01
Ccdc116Q80X53 Mir19b-2-201ENSMUST00000083539 84 ntBASIC2.49□□□□□ -2.01
Ccdc116Q80X53 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC2.49□□□□□ -2.01
Ccdc116Q80X53 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC2.48□□□□□ -2.01
Ccdc116Q80X53 Snora36b-201ENSMUST00000104383 132 ntBASIC2.48□□□□□ -2.01
Ccdc116Q80X53 Gm26011-201ENSMUST00000104410 104 ntBASIC2.48□□□□□ -2.01
Ccdc116Q80X53 Gm13588-201ENSMUST00000120026 135 ntBASIC2.48□□□□□ -2.01
Ccdc116Q80X53 Gm24691-201ENSMUST00000157762 140 ntBASIC2.48□□□□□ -2.01
Ccdc116Q80X53 Trav5d-3-201ENSMUST00000170041 270 ntBASIC2.48□□□□□ -2.01
Ccdc116Q80X53 Gm27532-201ENSMUST00000183726 113 ntBASIC2.48□□□□□ -2.01
Ccdc116Q80X53 AC153512.4-201ENSMUST00000217783 426 ntTSL 3 BASIC2.48□□□□□ -2.01
Ccdc116Q80X53 Mir107-201ENSMUST00000083660 87 ntBASIC2.48□□□□□ -2.01
Ccdc116Q80X53 Mir344c-201ENSMUST00000103919 92 ntBASIC2.47□□□□□ -2.01
Ccdc116Q80X53 Gm24010-201ENSMUST00000157731 282 ntBASIC2.47□□□□□ -2.01
Ccdc116Q80X53 Gm43626-201ENSMUST00000198575 162 ntBASIC2.47□□□□□ -2.01
Ccdc116Q80X53 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC2.47□□□□□ -2.01
Ccdc116Q80X53 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC2.47□□□□□ -2.01
Ccdc116Q80X53 Olfr251-202ENSMUST00000214865 4930 ntAPPRIS ALT2 TSL 5 BASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Skint5-203ENSMUST00000170105 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm24670-201ENSMUST00000104154 132 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Fau-ps1-201ENSMUST00000119675 252 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 n-R5s188-201ENSMUST00000122646 105 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm25113-201ENSMUST00000157185 143 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm25060-201ENSMUST00000157374 130 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm24000-201ENSMUST00000158063 89 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm25769-201ENSMUST00000158569 127 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm26004-201ENSMUST00000158804 116 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm20718-201ENSMUST00000176058 259 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm27505-201ENSMUST00000185071 110 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 AC164612.2-202ENSMUST00000216314 253 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm25628-201ENSMUST00000084002 105 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.46□□□□□ -2.02
Ccdc116Q80X53 Gm22545-201ENSMUST00000104350 132 ntBASIC2.45□□□□□ -2.02
Retrieved 100 of 76,532 protein–RNA pairs in 131.2 ms