Protein–RNA interactions for Protein: Q62442

Vamp1, Vesicle-associated membrane protein 1, mousemouse

Predictions only

Length 118 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vamp1Q62442 Gm15067-201ENSMUST00000119534 156 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Gm13588-201ENSMUST00000120026 135 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Gm22999-201ENSMUST00000157082 88 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Gm23599-201ENSMUST00000157261 251 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Gm25882-201ENSMUST00000157784 85 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Gm24747-201ENSMUST00000157835 87 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Mir3470b-201ENSMUST00000175563 126 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Gm27374-201ENSMUST00000183660 81 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Mir7047-201ENSMUST00000184595 64 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 AC160865.1-201ENSMUST00000219873 151 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 AC154328.1-201ENSMUST00000225875 307 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Gm26326-201ENSMUST00000083070 129 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Snord61-201ENSMUST00000083176 71 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Gm25628-201ENSMUST00000084002 105 ntBASIC2.34□□□□□ -2.03
Vamp1Q62442 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Vamp1Q62442 Gm26011-201ENSMUST00000104410 104 ntBASIC2.33□□□□□ -2.04
Vamp1Q62442 Gm14626-201ENSMUST00000117619 216 ntBASIC2.33□□□□□ -2.04
Vamp1Q62442 Snord93-201ENSMUST00000175580 71 ntBASIC2.33□□□□□ -2.04
Vamp1Q62442 Gm26073-201ENSMUST00000179906 127 ntBASIC2.33□□□□□ -2.04
Vamp1Q62442 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
Vamp1Q62442 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.33□□□□□ -2.04
Vamp1Q62442 Olfr561-202ENSMUST00000213432 2498 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm11644-201ENSMUST00000119735 150 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm11250-201ENSMUST00000142137 306 ntTSL 5 BASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm22187-201ENSMUST00000157819 129 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm24082-201ENSMUST00000175175 83 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm27511-201ENSMUST00000183502 127 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm34779-201ENSMUST00000210036 263 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm23736-201ENSMUST00000082553 75 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm23264-201ENSMUST00000083372 107 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm22576-201ENSMUST00000083733 104 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.32□□□□□ -2.04
Vamp1Q62442 Zfp280c-203ENSMUST00000088898 4024 ntAPPRIS P3 TSL 1 (best) BASIC2.32□□□□□ -2.04
Vamp1Q62442 Gm25727-201ENSMUST00000104522 131 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm11334-201ENSMUST00000121969 156 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm24787-201ENSMUST00000157380 123 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm22141-201ENSMUST00000157403 277 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm24505-201ENSMUST00000157682 126 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm23996-201ENSMUST00000158062 131 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm24730-201ENSMUST00000158228 117 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm25769-201ENSMUST00000158569 127 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm44384-201ENSMUST00000200208 114 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm18346-201ENSMUST00000216782 325 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 AC167721.1-201ENSMUST00000217088 279 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 AC124739.2-201ENSMUST00000222201 109 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm24151-201ENSMUST00000082758 141 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Gm25038-201ENSMUST00000082928 130 ntBASIC2.31□□□□□ -2.04
Vamp1Q62442 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm25068-201ENSMUST00000103895 110 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm25466-201ENSMUST00000103995 132 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm14502-201ENSMUST00000118154 113 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm23326-201ENSMUST00000157419 105 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm22966-201ENSMUST00000157957 129 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm25835-201ENSMUST00000158917 144 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Mir5104-201ENSMUST00000175319 94 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm23922-201ENSMUST00000178792 79 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm24657-201ENSMUST00000180085 79 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm22996-201ENSMUST00000180236 79 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm27773-201ENSMUST00000184087 78 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm27786-201ENSMUST00000184337 70 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm36551-201ENSMUST00000196787 300 ntTSL 5 BASIC2.3□□□□□ -2.04
Vamp1Q62442 Gm22683-201ENSMUST00000082854 137 ntBASIC2.3□□□□□ -2.04
Vamp1Q62442 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC2.3□□□□□ -2.04
Vamp1Q62442 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Vamp1Q62442 Gm44527-201ENSMUST00000182210 2945 ntTSL 2 BASIC2.29□□□□□ -2.04
Vamp1Q62442 Gm24141-201ENSMUST00000122776 115 ntBASIC2.29□□□□□ -2.04
Vamp1Q62442 Gm22790-201ENSMUST00000157229 129 ntBASIC2.29□□□□□ -2.04
Vamp1Q62442 Gm24443-201ENSMUST00000157242 132 ntBASIC2.29□□□□□ -2.04
Vamp1Q62442 Gm23260-201ENSMUST00000158317 172 ntBASIC2.29□□□□□ -2.04
Vamp1Q62442 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Vamp1Q62442 Gm23299-201ENSMUST00000082708 79 ntBASIC2.29□□□□□ -2.04
Vamp1Q62442 Skint6-202ENSMUST00000171224 3723 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Vamp1Q62442 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.04
Vamp1Q62442 Gm24436-201ENSMUST00000157889 302 ntBASIC2.28□□□□□ -2.04
Vamp1Q62442 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.28□□□□□ -2.04
Vamp1Q62442 Gm10813-201ENSMUST00000099936 90 ntBASIC2.28□□□□□ -2.04
Vamp1Q62442 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
Vamp1Q62442 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC2.27□□□□□ -2.05
Vamp1Q62442 Snora36b-201ENSMUST00000104383 132 ntBASIC2.27□□□□□ -2.05
Vamp1Q62442 Gm11792-201ENSMUST00000120640 168 ntBASIC2.27□□□□□ -2.05
Vamp1Q62442 U6.1-201ENSMUST00000157443 101 ntBASIC2.27□□□□□ -2.05
Vamp1Q62442 Mir7658-201ENSMUST00000184043 57 ntBASIC2.27□□□□□ -2.05
Vamp1Q62442 AC142499.1-201ENSMUST00000220036 374 ntBASIC2.27□□□□□ -2.05
Vamp1Q62442 Mir489-201ENSMUST00000093599 107 ntBASIC2.27□□□□□ -2.05
Vamp1Q62442 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC2.27□□□□□ -2.05
Vamp1Q62442 Gm15272-201ENSMUST00000120865 233 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm22956-201ENSMUST00000122520 80 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm22380-201ENSMUST00000157479 95 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm26090-201ENSMUST00000157897 128 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm24681-201ENSMUST00000158760 107 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm20391-201ENSMUST00000174722 106 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm37085-201ENSMUST00000193780 196 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm23925-201ENSMUST00000082471 132 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm10351-201ENSMUST00000087694 125 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm44240-201ENSMUST00000204015 2654 ntBASIC2.26□□□□□ -2.05
Vamp1Q62442 U2surp-202ENSMUST00000079659 7630 ntAPPRIS P1 TSL 1 (best) BASIC2.26□□□□□ -2.05
Vamp1Q62442 Gm24403-201ENSMUST00000104616 130 ntBASIC2.25□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 155.3 ms