Protein–RNA interactions for Protein: Q5U4C3

Scaf1, Splicing factor, arginine/serine-rich 19, mousemouse

Known RBP Predictions only

Length 1,256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scaf1Q5U4C3 Mir489-201ENSMUST00000093599 107 ntBASIC3.56□□□□□ -1.84
Scaf1Q5U4C3 Gm24274-201ENSMUST00000116787 124 ntBASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Gm15281-201ENSMUST00000125181 351 ntBASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Gm22330-201ENSMUST00000158068 115 ntBASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Mir3075-201ENSMUST00000175340 85 ntBASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Gm27786-201ENSMUST00000184337 70 ntBASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Gm29604-201ENSMUST00000187176 163 ntBASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Gm3724-201ENSMUST00000197957 349 ntBASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Mir300-201ENSMUST00000083485 79 ntBASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC3.55□□□□□ -1.84
Scaf1Q5U4C3 Vmn1r76-203ENSMUST00000226947 8145 ntAPPRIS ALT2 BASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Ppp4r3c-ps-201ENSMUST00000151416 2445 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Gm45104-201ENSMUST00000208748 4350 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Gm26247-201ENSMUST00000116702 91 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Gm24681-201ENSMUST00000158760 107 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Gm44464-201ENSMUST00000198010 138 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Olfr1319-ps1-201ENSMUST00000208550 274 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Gm25588-201ENSMUST00000082501 140 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Gm25797-201ENSMUST00000082640 107 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Snora33-201ENSMUST00000093556 129 ntBASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
Scaf1Q5U4C3 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Olfr1225-202ENSMUST00000216961 3231 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Gm11644-201ENSMUST00000119735 150 ntBASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Gm14671-201ENSMUST00000121790 262 ntBASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Gm11334-201ENSMUST00000121969 156 ntBASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Gm43439-201ENSMUST00000138710 322 ntTSL 3 BASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Gm22500-201ENSMUST00000158982 99 ntBASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Gm23504-201ENSMUST00000158988 95 ntBASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Mir3076-201ENSMUST00000175415 60 ntBASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Gm43602-201ENSMUST00000196772 300 ntBASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 mt-Tt-201ENSMUST00000082422 67 ntBASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Scaf1Q5U4C3 Gm25485-201ENSMUST00000104120 132 ntBASIC3.52□□□□□ -1.85
Scaf1Q5U4C3 Mir5118-201ENSMUST00000175551 67 ntBASIC3.52□□□□□ -1.85
Scaf1Q5U4C3 Gm25409-201ENSMUST00000083764 131 ntBASIC3.52□□□□□ -1.85
Scaf1Q5U4C3 AC133934.2-201ENSMUST00000221729 4129 ntBASIC3.51□□□□□ -1.85
Scaf1Q5U4C3 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Scaf1Q5U4C3 Gm26074-201ENSMUST00000104063 129 ntBASIC3.51□□□□□ -1.85
Scaf1Q5U4C3 Gm26011-201ENSMUST00000104410 104 ntBASIC3.51□□□□□ -1.85
Scaf1Q5U4C3 Gm22486-201ENSMUST00000116815 137 ntBASIC3.51□□□□□ -1.85
Scaf1Q5U4C3 Gm26084-201ENSMUST00000157903 104 ntBASIC3.51□□□□□ -1.85
Scaf1Q5U4C3 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC3.51□□□□□ -1.85
Scaf1Q5U4C3 Vmn1r29-205ENSMUST00000228909 4658 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Scaf1Q5U4C3 Slc16a7-206ENSMUST00000211781 10981 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Gm14502-201ENSMUST00000118154 113 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Gm26277-201ENSMUST00000157097 152 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Mir7039-201ENSMUST00000183852 85 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Gm44325-201ENSMUST00000196757 77 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Snord43-201ENSMUST00000199549 108 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Gm25697-201ENSMUST00000082902 98 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Mir9-2-201ENSMUST00000083490 72 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Mir19b-2-201ENSMUST00000083539 84 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Gm44133-202ENSMUST00000204450 2586 ntBASIC3.5□□□□□ -1.85
Scaf1Q5U4C3 Gm22750-201ENSMUST00000102076 103 ntBASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 n-R5s200-201ENSMUST00000104194 113 ntBASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 n-R5s187-201ENSMUST00000122769 111 ntBASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 Gm24358-201ENSMUST00000158424 288 ntBASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 Gm24044-201ENSMUST00000083107 156 ntBASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 Gm24410-201ENSMUST00000083433 107 ntBASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 Gm24449-201ENSMUST00000083985 106 ntBASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 Cdh4-202ENSMUST00000098996 69 ntTSL 5 BASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 Vmn1r76-202ENSMUST00000226300 8189 ntAPPRIS ALT2 BASIC3.49□□□□□ -1.85
Scaf1Q5U4C3 Gm14709-201ENSMUST00000121225 304 ntBASIC3.48□□□□□ -1.85
Scaf1Q5U4C3 Gm20477-201ENSMUST00000174028 280 ntBASIC3.48□□□□□ -1.85
Scaf1Q5U4C3 Gm18346-201ENSMUST00000216782 325 ntBASIC3.48□□□□□ -1.85
Scaf1Q5U4C3 Gm25357-201ENSMUST00000082745 72 ntBASIC3.48□□□□□ -1.85
Scaf1Q5U4C3 Gm22866-201ENSMUST00000083947 177 ntBASIC3.48□□□□□ -1.85
Scaf1Q5U4C3 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm26339-201ENSMUST00000102368 99 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm26342-201ENSMUST00000104557 129 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm13756-201ENSMUST00000117618 222 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm22228-201ENSMUST00000157364 101 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm24010-201ENSMUST00000157731 282 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm23548-201ENSMUST00000158963 106 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm16111-201ENSMUST00000162128 285 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm23963-201ENSMUST00000179603 77 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm27979-201ENSMUST00000185126 56 ntBASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gpr174-201ENSMUST00000101294 4614 ntAPPRIS P1 TSL 1 (best) BASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Uty-201ENSMUST00000069309 5208 ntAPPRIS P3 TSL 1 (best) BASIC3.47□□□□□ -1.85
Scaf1Q5U4C3 Gm24670-201ENSMUST00000104154 132 ntBASIC3.46□□□□□ -1.86
Scaf1Q5U4C3 Gm23889-201ENSMUST00000122689 104 ntBASIC3.46□□□□□ -1.86
Scaf1Q5U4C3 Gm16584-201ENSMUST00000159267 189 ntBASIC3.46□□□□□ -1.86
Scaf1Q5U4C3 Mir6905-201ENSMUST00000184228 70 ntBASIC3.46□□□□□ -1.86
Scaf1Q5U4C3 Gm45522-201ENSMUST00000210784 166 ntBASIC3.46□□□□□ -1.86
Scaf1Q5U4C3 Gm45544-201ENSMUST00000211130 88 ntBASIC3.46□□□□□ -1.86
Scaf1Q5U4C3 CT025579.1-201ENSMUST00000223779 366 ntBASIC3.46□□□□□ -1.86
Scaf1Q5U4C3 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC3.46□□□□□ -1.86
Scaf1Q5U4C3 Gm23656-201ENSMUST00000122626 112 ntBASIC3.45□□□□□ -1.86
Scaf1Q5U4C3 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC3.45□□□□□ -1.86
Scaf1Q5U4C3 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.45□□□□□ -1.86
Scaf1Q5U4C3 Gm23264-201ENSMUST00000083372 107 ntBASIC3.45□□□□□ -1.86
Scaf1Q5U4C3 Thoc2-201ENSMUST00000047037 7622 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Scaf1Q5U4C3 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Scaf1Q5U4C3 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 134 ms