Protein–RNA interactions for Protein: Q5NCC9

Trim58, E3 ubiquitin-protein ligase TRIM58, mousemouse

Predictions only

Length 485 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim58Q5NCC9 Gm25938-201ENSMUST00000104139 166 ntBASIC1.43□□□□□ -2.18
Trim58Q5NCC9 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.43□□□□□ -2.18
Trim58Q5NCC9 Gm28020-201ENSMUST00000157739 67 ntBASIC1.43□□□□□ -2.18
Trim58Q5NCC9 Gm24851-201ENSMUST00000158028 103 ntBASIC1.43□□□□□ -2.18
Trim58Q5NCC9 Gm23219-201ENSMUST00000158123 87 ntBASIC1.43□□□□□ -2.18
Trim58Q5NCC9 Gm27585-201ENSMUST00000183717 199 ntBASIC1.43□□□□□ -2.18
Trim58Q5NCC9 Gm27419-201ENSMUST00000184576 109 ntBASIC1.43□□□□□ -2.18
Trim58Q5NCC9 Gm44325-201ENSMUST00000196757 77 ntBASIC1.43□□□□□ -2.18
Trim58Q5NCC9 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC1.43□□□□□ -2.18
Trim58Q5NCC9 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.42□□□□□ -2.18
Trim58Q5NCC9 Gm25377-201ENSMUST00000104334 129 ntBASIC1.42□□□□□ -2.18
Trim58Q5NCC9 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.42□□□□□ -2.18
Trim58Q5NCC9 Gm25825-201ENSMUST00000157091 124 ntBASIC1.42□□□□□ -2.18
Trim58Q5NCC9 Gm22145-201ENSMUST00000157396 148 ntBASIC1.42□□□□□ -2.18
Trim58Q5NCC9 Gm27898-201ENSMUST00000183987 80 ntBASIC1.42□□□□□ -2.18
Trim58Q5NCC9 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.42□□□□□ -2.18
Trim58Q5NCC9 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.42□□□□□ -2.18
Trim58Q5NCC9 Mir146-201ENSMUST00000083667 65 ntBASIC1.42□□□□□ -2.18
Trim58Q5NCC9 Gm24121-201ENSMUST00000102029 106 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Mir541-201ENSMUST00000102097 90 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm22195-201ENSMUST00000116861 108 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm23656-201ENSMUST00000122626 112 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm25390-201ENSMUST00000157341 103 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm25424-201ENSMUST00000157612 58 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm26029-201ENSMUST00000158659 132 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm23208-201ENSMUST00000158666 127 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Mir3057-201ENSMUST00000175040 91 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm24366-201ENSMUST00000175383 86 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm27476-201ENSMUST00000183366 104 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm24762-201ENSMUST00000083689 104 ntBASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Olfr820-202ENSMUST00000214917 4701 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Trim58Q5NCC9 Gm23390-201ENSMUST00000157393 106 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm23665-201ENSMUST00000158054 62 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm23892-201ENSMUST00000158105 130 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm27579-201ENSMUST00000158113 63 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm25069-201ENSMUST00000175238 86 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm20630-201ENSMUST00000177387 551 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Mir6419-201ENSMUST00000184784 113 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm45508-201ENSMUST00000209298 299 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm19855-201ENSMUST00000210145 249 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Mirlet7c-1-201ENSMUST00000083623 94 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm24522-201ENSMUST00000083964 108 ntBASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.4□□□□□ -2.19
Trim58Q5NCC9 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Mir653-201ENSMUST00000102402 85 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Gm25015-201ENSMUST00000158400 128 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Gm22944-201ENSMUST00000158662 133 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Mir6381-201ENSMUST00000183426 87 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Gm27421-201ENSMUST00000184729 167 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Gm42855-201ENSMUST00000197388 253 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC1.39□□□□□ -2.19
Trim58Q5NCC9 Gm22421-201ENSMUST00000083058 107 ntBASIC1.39□□□□□ -2.19
Trim58Q5NCC9 AC133934.2-201ENSMUST00000221729 4129 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm23907-201ENSMUST00000104595 189 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm14536-201ENSMUST00000118324 138 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm15027-201ENSMUST00000120922 138 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm12815-201ENSMUST00000121737 135 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm25884-201ENSMUST00000157782 62 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm23083-201ENSMUST00000157851 116 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm25749-201ENSMUST00000175485 111 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm25936-201ENSMUST00000179952 114 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Mir6905-201ENSMUST00000184228 70 ntBASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.38□□□□□ -2.19
Trim58Q5NCC9 Snord19-201ENSMUST00000104609 76 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 Gm6897-201ENSMUST00000117714 138 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 Gm14758-201ENSMUST00000119104 138 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 Mir1967-201ENSMUST00000157789 82 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.37□□□□□ -2.19
Trim58Q5NCC9 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 Gm25634-201ENSMUST00000082667 105 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 Gm23377-201ENSMUST00000082943 126 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 Mir221-201ENSMUST00000083488 95 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 Gm24252-201ENSMUST00000083700 132 ntBASIC1.37□□□□□ -2.19
Trim58Q5NCC9 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.36□□□□□ -2.19
Trim58Q5NCC9 Snord70-201ENSMUST00000104157 87 ntBASIC1.36□□□□□ -2.19
Trim58Q5NCC9 Gm25495-201ENSMUST00000104431 131 ntBASIC1.36□□□□□ -2.19
Trim58Q5NCC9 Gm11857-201ENSMUST00000119817 324 ntBASIC1.36□□□□□ -2.19
Trim58Q5NCC9 Gm13801-201ENSMUST00000120750 160 ntBASIC1.36□□□□□ -2.19
Trim58Q5NCC9 Gm26026-201ENSMUST00000122726 123 ntBASIC1.36□□□□□ -2.19
Trim58Q5NCC9 Gm28912-201ENSMUST00000189001 234 ntBASIC1.36□□□□□ -2.19
Trim58Q5NCC9 Gm34139-201ENSMUST00000196166 294 ntBASIC1.36□□□□□ -2.19
Trim58Q5NCC9 AC168062.3-201ENSMUST00000227025 165 ntBASIC1.36□□□□□ -2.19
Trim58Q5NCC9 Gm13231-201ENSMUST00000119218 2850 ntBASIC1.35□□□□□ -2.19
Trim58Q5NCC9 Gm25759-201ENSMUST00000103988 129 ntBASIC1.35□□□□□ -2.19
Trim58Q5NCC9 Gm22780-201ENSMUST00000104084 132 ntBASIC1.35□□□□□ -2.19
Trim58Q5NCC9 Mir293-201ENSMUST00000104841 80 ntBASIC1.35□□□□□ -2.19
Trim58Q5NCC9 Gm6025-201ENSMUST00000121517 201 ntBASIC1.35□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 258.6 ms