Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Gm24375-201ENSMUST00000104397 132 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Gm24590-201ENSMUST00000116699 119 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Gm23841-201ENSMUST00000116951 114 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Gm14837-201ENSMUST00000119688 206 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Gm12686-201ENSMUST00000120546 397 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Mir1898-201ENSMUST00000122643 83 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Mir3471-1-201ENSMUST00000175139 131 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Mir34a-201ENSMUST00000083559 102 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Mir490-201ENSMUST00000093567 84 ntBASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Trim40Q3UWA4 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Gm24915-201ENSMUST00000157288 78 ntBASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Gm27493-201ENSMUST00000184128 78 ntBASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Gm38183-201ENSMUST00000193189 205 ntBASIC1.22□□□□□ -2.21
Trim40Q3UWA4 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Gm25634-201ENSMUST00000082667 105 ntBASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Gm25142-201ENSMUST00000082698 107 ntBASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Rny1-201ENSMUST00000083767 112 ntBASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.22□□□□□ -2.21
Trim40Q3UWA4 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm42718-201ENSMUST00000197319 2681 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Mir541-201ENSMUST00000102097 90 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm23048-201ENSMUST00000157237 129 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm25184-201ENSMUST00000157753 163 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Mir1967-201ENSMUST00000157789 82 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm23277-201ENSMUST00000157914 136 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm22485-201ENSMUST00000157990 109 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm22074-201ENSMUST00000158595 113 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm27585-201ENSMUST00000183717 199 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm43602-201ENSMUST00000196772 300 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm44052-201ENSMUST00000203382 396 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 AC133517.1-203ENSMUST00000225570 390 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.21□□□□□ -2.22
Trim40Q3UWA4 Gm25315-201ENSMUST00000116823 121 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm26026-201ENSMUST00000122726 123 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm23122-201ENSMUST00000157645 103 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm28020-201ENSMUST00000157739 67 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm24177-201ENSMUST00000158927 131 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Mir5104-201ENSMUST00000175319 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm25750-201ENSMUST00000175483 112 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm22258-201ENSMUST00000177645 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm23047-201ENSMUST00000177661 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm26032-201ENSMUST00000178535 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm25210-201ENSMUST00000178813 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm25157-201ENSMUST00000178914 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm22046-201ENSMUST00000179027 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm22941-201ENSMUST00000179630 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm25471-201ENSMUST00000180126 94 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm25820-202ENSMUST00000197479 128 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC1.2□□□□□ -2.22
Trim40Q3UWA4 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.2□□□□□ -2.22
Trim40Q3UWA4 Gm11792-201ENSMUST00000120640 168 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Gm11334-201ENSMUST00000121969 156 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Gm23892-201ENSMUST00000158105 130 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Mir1931-201ENSMUST00000158589 119 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Mir3061-201ENSMUST00000175129 91 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Gm37579-201ENSMUST00000194291 142 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Gm22884-201ENSMUST00000083127 140 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Gm22743-201ENSMUST00000083445 133 ntBASIC1.19□□□□□ -2.22
Trim40Q3UWA4 Gm24385-201ENSMUST00000122694 350 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 Gm22145-201ENSMUST00000157396 148 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 Gm22586-201ENSMUST00000157507 122 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 Gm22433-201ENSMUST00000158550 142 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 Gm16399-201ENSMUST00000181423 219 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 Gm27402-201ENSMUST00000183890 120 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 Mir7017-201ENSMUST00000184894 62 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 Gm44326-201ENSMUST00000198226 101 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 Snord96a-201ENSMUST00000082791 81 ntBASIC1.18□□□□□ -2.22
Trim40Q3UWA4 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm23010-201ENSMUST00000104151 126 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm14882-201ENSMUST00000117216 218 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm6897-201ENSMUST00000117714 138 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm14758-201ENSMUST00000119104 138 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Sel1l2-201ENSMUST00000120133 579 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm12815-201ENSMUST00000121737 135 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm22228-201ENSMUST00000157364 101 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm23542-201ENSMUST00000158208 96 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm22164-201ENSMUST00000158413 106 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm22403-201ENSMUST00000174919 84 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm26092-201ENSMUST00000179798 97 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Mir669a-1-201ENSMUST00000180238 97 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm9251-201ENSMUST00000197202 628 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm44057-201ENSMUST00000204547 96 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Snord1a-201ENSMUST00000083160 74 ntBASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm29515-201ENSMUST00000188273 2077 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Trim40Q3UWA4 Gm24121-201ENSMUST00000102029 106 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Gm27579-201ENSMUST00000158113 63 ntBASIC1.16□□□□□ -2.22
Trim40Q3UWA4 Gm26038-201ENSMUST00000158151 106 ntBASIC1.16□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 150.8 ms