Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.4□□□□□ -2.35
Upf3bQ3ULL6 Mir101a-201ENSMUST00000083517 83 ntBASIC0.4□□□□□ -2.35
Upf3bQ3ULL6 Gm24445-201ENSMUST00000083981 107 ntBASIC0.4□□□□□ -2.35
Upf3bQ3ULL6 Gm26329-201ENSMUST00000093723 110 ntBASIC0.4□□□□□ -2.35
Upf3bQ3ULL6 Gm22791-201ENSMUST00000157232 145 ntBASIC0.39□□□□□ -2.35
Upf3bQ3ULL6 Gm24393-201ENSMUST00000158135 97 ntBASIC0.39□□□□□ -2.35
Upf3bQ3ULL6 Gm22431-201ENSMUST00000158545 107 ntBASIC0.39□□□□□ -2.35
Upf3bQ3ULL6 Gm44488-201ENSMUST00000199467 119 ntBASIC0.39□□□□□ -2.35
Upf3bQ3ULL6 Gm44828-201ENSMUST00000203745 106 ntBASIC0.39□□□□□ -2.35
Upf3bQ3ULL6 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.39□□□□□ -2.35
Upf3bQ3ULL6 Gm25204-201ENSMUST00000082843 106 ntBASIC0.39□□□□□ -2.35
Upf3bQ3ULL6 Gm8251-201ENSMUST00000168641 5985 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Upf3bQ3ULL6 1700047A11Rik-202ENSMUST00000153552 622 ntTSL 1 (best) BASIC0.38□□□□□ -2.35
Upf3bQ3ULL6 Gm25838-201ENSMUST00000158920 120 ntBASIC0.38□□□□□ -2.35
Upf3bQ3ULL6 Gm37337-201ENSMUST00000192601 993 ntBASIC0.38□□□□□ -2.35
Upf3bQ3ULL6 Gm6105-201ENSMUST00000200580 624 ntBASIC0.38□□□□□ -2.35
Upf3bQ3ULL6 Gm44063-201ENSMUST00000203307 376 ntBASIC0.38□□□□□ -2.35
Upf3bQ3ULL6 Gm22294-201ENSMUST00000083308 104 ntBASIC0.38□□□□□ -2.35
Upf3bQ3ULL6 Gm22759-201ENSMUST00000102276 96 ntBASIC0.37□□□□□ -2.35
Upf3bQ3ULL6 Gm14761-201ENSMUST00000121363 262 ntBASIC0.37□□□□□ -2.35
Upf3bQ3ULL6 Gm24595-201ENSMUST00000122501 110 ntBASIC0.37□□□□□ -2.35
Upf3bQ3ULL6 Gm25781-201ENSMUST00000122527 84 ntBASIC0.37□□□□□ -2.35
Upf3bQ3ULL6 Gm23113-201ENSMUST00000158477 99 ntBASIC0.37□□□□□ -2.35
Upf3bQ3ULL6 Gm24810-201ENSMUST00000175317 70 ntBASIC0.37□□□□□ -2.35
Upf3bQ3ULL6 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.37□□□□□ -2.35
Upf3bQ3ULL6 Mir219b-201ENSMUST00000198317 65 ntBASIC0.37□□□□□ -2.35
Upf3bQ3ULL6 Gm22786-201ENSMUST00000104086 122 ntBASIC0.36□□□□□ -2.35
Upf3bQ3ULL6 Gm14946-201ENSMUST00000119859 296 ntBASIC0.36□□□□□ -2.35
Upf3bQ3ULL6 Gm25247-201ENSMUST00000175475 90 ntBASIC0.36□□□□□ -2.35
Upf3bQ3ULL6 Gm26116-201ENSMUST00000175600 77 ntBASIC0.36□□□□□ -2.35
Upf3bQ3ULL6 Mir376a-201ENSMUST00000197584 68 ntBASIC0.36□□□□□ -2.35
Upf3bQ3ULL6 Gm23969-201ENSMUST00000083324 74 ntBASIC0.36□□□□□ -2.35
Upf3bQ3ULL6 Mir500-201ENSMUST00000093600 92 ntBASIC0.36□□□□□ -2.35
Upf3bQ3ULL6 Olfr1154-203ENSMUST00000215862 2624 ntAPPRIS P1 TSL 5 BASIC0.36□□□□□ -2.35
Upf3bQ3ULL6 Gm11115-201ENSMUST00000113255 54 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Upf3bQ3ULL6 Gm13565-201ENSMUST00000133596 700 ntTSL 1 (best) BASIC0.35□□□□□ -2.35
Upf3bQ3ULL6 Gm16546-201ENSMUST00000159442 355 ntBASIC0.35□□□□□ -2.35
Upf3bQ3ULL6 Gm23921-201ENSMUST00000175258 107 ntBASIC0.35□□□□□ -2.35
Upf3bQ3ULL6 Mir6389-201ENSMUST00000183661 102 ntBASIC0.35□□□□□ -2.35
Upf3bQ3ULL6 Gm27539-201ENSMUST00000184971 224 ntBASIC0.35□□□□□ -2.35
Upf3bQ3ULL6 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.35□□□□□ -2.35
Upf3bQ3ULL6 Gm25078-201ENSMUST00000082530 107 ntBASIC0.35□□□□□ -2.35
Upf3bQ3ULL6 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC0.34□□□□□ -2.35
Upf3bQ3ULL6 Gm24116-201ENSMUST00000103975 107 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm23492-201ENSMUST00000116837 115 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm13711-201ENSMUST00000119708 453 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm6272-201ENSMUST00000121256 171 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm22883-201ENSMUST00000157376 106 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm25671-201ENSMUST00000178612 105 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm23307-201ENSMUST00000179167 105 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm25286-201ENSMUST00000179790 105 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm36946-201ENSMUST00000192706 435 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm22248-201ENSMUST00000082482 150 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm23851-201ENSMUST00000083831 103 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Mir496a-201ENSMUST00000093627 79 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm24164-201ENSMUST00000093663 104 ntBASIC0.34□□□□□ -2.36
Upf3bQ3ULL6 Gm24375-201ENSMUST00000104397 132 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Gm25393-201ENSMUST00000157336 285 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Gm25375-201ENSMUST00000158157 135 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Vmn1r-ps31-201ENSMUST00000174112 238 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Gm29013-201ENSMUST00000187431 237 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Gm30155-201ENSMUST00000223458 339 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 AC165092.3-201ENSMUST00000223602 282 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Gm26326-201ENSMUST00000083070 129 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Gm25138-201ENSMUST00000083248 136 ntBASIC0.33□□□□□ -2.36
Upf3bQ3ULL6 Snord89-201ENSMUST00000104516 110 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 Gm24476-201ENSMUST00000157437 131 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 Gm22598-201ENSMUST00000157600 127 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 Gm23584-201ENSMUST00000157655 129 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 Gm22706-201ENSMUST00000157907 112 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 Gm24963-201ENSMUST00000157916 144 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 Gm23665-201ENSMUST00000158054 62 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 AC131720.2-201ENSMUST00000220420 431 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 AC125311.1-201ENSMUST00000226950 220 ntBASIC0.32□□□□□ -2.36
Upf3bQ3ULL6 Gm26152-201ENSMUST00000157427 101 ntBASIC0.31□□□□□ -2.36
Upf3bQ3ULL6 Gm23024-201ENSMUST00000158770 292 ntBASIC0.31□□□□□ -2.36
Upf3bQ3ULL6 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Upf3bQ3ULL6 Gm27980-201ENSMUST00000184094 169 ntBASIC0.31□□□□□ -2.36
Upf3bQ3ULL6 4930511M18Rik-201ENSMUST00000197811 679 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
Upf3bQ3ULL6 CT025526.1-201ENSMUST00000217327 267 ntBASIC0.31□□□□□ -2.36
Upf3bQ3ULL6 Gm26056-201ENSMUST00000083043 104 ntBASIC0.31□□□□□ -2.36
Upf3bQ3ULL6 Gm24616-201ENSMUST00000083274 139 ntBASIC0.31□□□□□ -2.36
Upf3bQ3ULL6 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Gm24499-201ENSMUST00000158446 104 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Gm24880-201ENSMUST00000158776 85 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Mir7077-201ENSMUST00000183991 57 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Gm10105-201ENSMUST00000184601 270 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Gm44352-201ENSMUST00000196358 110 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Olfr241-ps1-201ENSMUST00000197024 633 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Gm8219-201ENSMUST00000218309 242 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Gm22283-201ENSMUST00000082556 161 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Gm23039-201ENSMUST00000083870 161 ntBASIC0.3□□□□□ -2.36
Upf3bQ3ULL6 Gm23708-201ENSMUST00000104367 123 ntBASIC0.29□□□□□ -2.36
Upf3bQ3ULL6 Gm16539-201ENSMUST00000160086 327 ntBASIC0.29□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 129.9 ms