Protein–RNA interactions for Protein: Q3U4B1

Ssbp4, Single stranded DNA binding protein 4, isoform CRA_b, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssbp4Q3U4B1 Gm22586-201ENSMUST00000157507 122 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm22338-201ENSMUST00000157715 129 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm26157-201ENSMUST00000158974 126 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm37778-201ENSMUST00000191732 190 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Ighv1-1-201ENSMUST00000194912 291 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Snord80-202ENSMUST00000199023 77 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Snord43-201ENSMUST00000199549 108 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm42960-201ENSMUST00000202160 241 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm25813-201ENSMUST00000082748 191 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm24536-201ENSMUST00000083144 107 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm23678-201ENSMUST00000083157 107 ntBASIC1.56□□□□□ -2.16
Ssbp4Q3U4B1 Gm24276-201ENSMUST00000102181 110 ntBASIC1.55□□□□□ -2.16
Ssbp4Q3U4B1 Gm24394-201ENSMUST00000158141 123 ntBASIC1.55□□□□□ -2.16
Ssbp4Q3U4B1 Gm17528-201ENSMUST00000171026 239 ntBASIC1.55□□□□□ -2.16
Ssbp4Q3U4B1 Gm24106-201ENSMUST00000175498 127 ntBASIC1.55□□□□□ -2.16
Ssbp4Q3U4B1 Mir7225-201ENSMUST00000184178 54 ntBASIC1.55□□□□□ -2.16
Ssbp4Q3U4B1 Mir6950-201ENSMUST00000184438 73 ntBASIC1.55□□□□□ -2.16
Ssbp4Q3U4B1 Gm22683-201ENSMUST00000082854 137 ntBASIC1.55□□□□□ -2.16
Ssbp4Q3U4B1 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
Ssbp4Q3U4B1 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Mir293-201ENSMUST00000104841 80 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Gm23665-201ENSMUST00000158054 62 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Gm24222-201ENSMUST00000158834 93 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Gm44052-201ENSMUST00000203382 396 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Gm44938-201ENSMUST00000208614 427 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 AC154328.1-201ENSMUST00000225875 307 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Mir155-201ENSMUST00000083463 65 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Mir151-201ENSMUST00000083678 68 ntBASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Ssbp4Q3U4B1 Olfr1448-203ENSMUST00000213713 4336 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm23578-201ENSMUST00000103943 104 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm25090-201ENSMUST00000104000 132 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm25825-201ENSMUST00000157091 124 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm25994-201ENSMUST00000175392 101 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm22286-201ENSMUST00000179708 107 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Mir7679-201ENSMUST00000183379 63 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm28912-201ENSMUST00000189001 234 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm22704-201ENSMUST00000083027 137 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm24929-201ENSMUST00000083403 139 ntBASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.16
Ssbp4Q3U4B1 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.53□□□□□ -2.17
Ssbp4Q3U4B1 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 n-R5s15-201ENSMUST00000122635 111 ntBASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.52□□□□□ -2.17
Ssbp4Q3U4B1 Zfp600-201ENSMUST00000092750 4154 ntAPPRIS P1 TSL 1 (best) BASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm23653-201ENSMUST00000116751 97 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm23990-201ENSMUST00000117031 117 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Mir1949-201ENSMUST00000157434 141 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm26412-201ENSMUST00000157666 55 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm25599-201ENSMUST00000157816 103 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm23854-201ENSMUST00000158378 108 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm7258-201ENSMUST00000179317 300 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Mir7009-201ENSMUST00000184519 64 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm22686-201ENSMUST00000082847 100 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Mir429-201ENSMUST00000083493 83 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.51□□□□□ -2.17
Ssbp4Q3U4B1 Gm26293-201ENSMUST00000104170 84 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm6952-201ENSMUST00000118629 159 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm13345-201ENSMUST00000121928 228 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm23390-201ENSMUST00000157393 106 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm22476-201ENSMUST00000158902 100 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm23289-201ENSMUST00000175615 108 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm16404-201ENSMUST00000177739 468 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm14598-201ENSMUST00000180109 468 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm14625-201ENSMUST00000180231 468 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Mir7241-201ENSMUST00000184532 64 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm21064-202ENSMUST00000190583 278 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Gm5010-201ENSMUST00000213131 260 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.5□□□□□ -2.17
Ssbp4Q3U4B1 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Olfr67-201ENSMUST00000183254 3851 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm14536-201ENSMUST00000118324 138 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm15027-201ENSMUST00000120922 138 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm23718-201ENSMUST00000157350 307 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm22606-201ENSMUST00000158290 103 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm24131-201ENSMUST00000158539 107 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm22665-201ENSMUST00000158720 275 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm24333-201ENSMUST00000175101 84 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm25464-201ENSMUST00000175481 107 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm44326-201ENSMUST00000198226 101 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 Gm44385-201ENSMUST00000198781 81 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 AC122428.1-201ENSMUST00000213709 217 ntTSL 3 BASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 AC158982.2-201ENSMUST00000226283 184 ntBASIC1.49□□□□□ -2.17
Ssbp4Q3U4B1 G2e3-203ENSMUST00000121521 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC1.48□□□□□ -2.17
Retrieved 100 of 76,532 protein–RNA pairs in 135.6 ms