Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Gm26049-201ENSMUST00000157313 108 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm26150-201ENSMUST00000157426 151 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm23558-201ENSMUST00000157823 80 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm24467-201ENSMUST00000157887 126 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm23892-201ENSMUST00000158105 130 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm22768-201ENSMUST00000158366 153 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm22433-201ENSMUST00000158550 142 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm21885-201ENSMUST00000178891 327 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm23002-201ENSMUST00000179221 107 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm27511-201ENSMUST00000183502 127 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm27722-201ENSMUST00000183908 76 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm44853-201ENSMUST00000209070 250 ntBASIC1.7□□□□□ -2.14
NcanP55066 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.7□□□□□ -2.14
NcanP55066 Mir301-201ENSMUST00000083655 86 ntBASIC1.7□□□□□ -2.14
NcanP55066 Mir151-201ENSMUST00000083678 68 ntBASIC1.7□□□□□ -2.14
NcanP55066 Gm24079-201ENSMUST00000104352 132 ntBASIC1.69□□□□□ -2.14
NcanP55066 Gm24632-201ENSMUST00000122770 323 ntBASIC1.69□□□□□ -2.14
NcanP55066 Gm23901-201ENSMUST00000157570 107 ntBASIC1.69□□□□□ -2.14
NcanP55066 Gm26405-201ENSMUST00000158495 100 ntBASIC1.69□□□□□ -2.14
NcanP55066 Gm23008-201ENSMUST00000158946 80 ntBASIC1.69□□□□□ -2.14
NcanP55066 Gm24510-201ENSMUST00000174965 94 ntBASIC1.69□□□□□ -2.14
NcanP55066 Gm24204-201ENSMUST00000082950 107 ntBASIC1.69□□□□□ -2.14
NcanP55066 Snord118-201ENSMUST00000082965 135 ntBASIC1.69□□□□□ -2.14
NcanP55066 Gm24412-201ENSMUST00000083426 109 ntBASIC1.69□□□□□ -2.14
NcanP55066 Gm24579-201ENSMUST00000103964 144 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm24640-201ENSMUST00000116949 126 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm22626-201ENSMUST00000116990 126 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm12771-201ENSMUST00000120246 135 ntBASIC1.68□□□□□ -2.14
NcanP55066 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm22145-201ENSMUST00000157396 148 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm25994-201ENSMUST00000175392 101 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm24761-201ENSMUST00000179589 127 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm24488-201ENSMUST00000179934 127 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm25701-201ENSMUST00000179988 127 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm26431-201ENSMUST00000180199 127 ntBASIC1.68□□□□□ -2.14
NcanP55066 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.68□□□□□ -2.14
NcanP55066 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.68□□□□□ -2.14
NcanP55066 Defb50-201ENSMUST00000078879 373 ntAPPRIS P1 TSL 1 (best) BASIC1.68□□□□□ -2.14
NcanP55066 Gm25482-201ENSMUST00000083225 107 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm24252-201ENSMUST00000083700 132 ntBASIC1.68□□□□□ -2.14
NcanP55066 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.67□□□□□ -2.14
NcanP55066 Mir541-201ENSMUST00000102097 90 ntBASIC1.67□□□□□ -2.14
NcanP55066 Mir767-201ENSMUST00000103256 107 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm24283-201ENSMUST00000104233 107 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm25495-201ENSMUST00000104431 131 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm14709-201ENSMUST00000121225 304 ntBASIC1.67□□□□□ -2.14
NcanP55066 Mir1949-201ENSMUST00000157434 141 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm23219-201ENSMUST00000158123 87 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm24277-201ENSMUST00000158661 104 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm24656-201ENSMUST00000177548 132 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm21060-201ENSMUST00000179346 168 ntAPPRIS P1 BASIC1.67□□□□□ -2.14
NcanP55066 Mir6950-201ENSMUST00000184438 73 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm44491-201ENSMUST00000196794 96 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm35309-201ENSMUST00000208337 478 ntTSL 3 BASIC1.67□□□□□ -2.14
NcanP55066 Gm24536-201ENSMUST00000083144 107 ntBASIC1.67□□□□□ -2.14
NcanP55066 AC161250.2-201ENSMUST00000215114 3107 ntBASIC1.67□□□□□ -2.14
NcanP55066 Gm24121-201ENSMUST00000102029 106 ntBASIC1.66□□□□□ -2.14
NcanP55066 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC1.66□□□□□ -2.14
NcanP55066 Gm23492-201ENSMUST00000116837 115 ntBASIC1.66□□□□□ -2.14
NcanP55066 Gm25541-201ENSMUST00000116888 126 ntBASIC1.66□□□□□ -2.14
NcanP55066 Gm23083-201ENSMUST00000157851 116 ntBASIC1.66□□□□□ -2.14
NcanP55066 Gm23854-201ENSMUST00000158378 108 ntBASIC1.66□□□□□ -2.14
NcanP55066 Gm25715-201ENSMUST00000158627 125 ntBASIC1.66□□□□□ -2.14
NcanP55066 Gm16162-201ENSMUST00000162296 297 ntBASIC1.66□□□□□ -2.14
NcanP55066 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.66□□□□□ -2.14
NcanP55066 Gm24165-201ENSMUST00000082718 128 ntBASIC1.66□□□□□ -2.14
NcanP55066 Gm24406-201ENSMUST00000083026 128 ntBASIC1.66□□□□□ -2.14
NcanP55066 Gm24867-201ENSMUST00000104161 107 ntBASIC1.65□□□□□ -2.15
NcanP55066 Gm24440-201ENSMUST00000157236 63 ntBASIC1.65□□□□□ -2.15
NcanP55066 Gm24851-201ENSMUST00000158028 103 ntBASIC1.65□□□□□ -2.15
NcanP55066 Gm24006-201ENSMUST00000158462 132 ntBASIC1.65□□□□□ -2.15
NcanP55066 Gm25768-201ENSMUST00000158570 98 ntBASIC1.65□□□□□ -2.15
NcanP55066 Gm22075-201ENSMUST00000158599 192 ntBASIC1.65□□□□□ -2.15
NcanP55066 Gm24512-201ENSMUST00000174963 65 ntBASIC1.65□□□□□ -2.15
NcanP55066 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.65□□□□□ -2.15
NcanP55066 Gm27421-201ENSMUST00000184729 167 ntBASIC1.65□□□□□ -2.15
NcanP55066 Gm35736-201ENSMUST00000203681 313 ntBASIC1.65□□□□□ -2.15
NcanP55066 Gm45268-201ENSMUST00000210046 370 ntBASIC1.65□□□□□ -2.15
NcanP55066 AC098718.2-201ENSMUST00000226822 285 ntBASIC1.65□□□□□ -2.15
NcanP55066 Olfr8-203ENSMUST00000214952 3407 ntAPPRIS P1 TSL 5 BASIC1.65□□□□□ -2.15
NcanP55066 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.65□□□□□ -2.15
NcanP55066 Gm26135-201ENSMUST00000101993 72 ntBASIC1.64□□□□□ -2.15
NcanP55066 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.64□□□□□ -2.15
NcanP55066 Gm25720-201ENSMUST00000157503 105 ntBASIC1.64□□□□□ -2.15
NcanP55066 Gm23536-201ENSMUST00000157541 134 ntBASIC1.64□□□□□ -2.15
NcanP55066 Gm20477-201ENSMUST00000174028 280 ntBASIC1.64□□□□□ -2.15
NcanP55066 Gm24572-201ENSMUST00000175505 88 ntBASIC1.64□□□□□ -2.15
NcanP55066 Snord50b-201ENSMUST00000178497 72 ntBASIC1.64□□□□□ -2.15
NcanP55066 Gm22259-201ENSMUST00000178926 107 ntBASIC1.64□□□□□ -2.15
NcanP55066 Gm44352-201ENSMUST00000196358 110 ntBASIC1.64□□□□□ -2.15
NcanP55066 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.64□□□□□ -2.15
NcanP55066 Olfr797-ps1-201ENSMUST00000203614 415 ntBASIC1.64□□□□□ -2.15
NcanP55066 Gm45754-201ENSMUST00000212380 279 ntBASIC1.64□□□□□ -2.15
NcanP55066 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.64□□□□□ -2.15
NcanP55066 Gm43484-201ENSMUST00000198333 5966 ntBASIC1.64□□□□□ -2.15
NcanP55066 Vmn1r29-202ENSMUST00000226971 4714 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
NcanP55066 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.63□□□□□ -2.15
NcanP55066 Mir293-201ENSMUST00000104841 80 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm24381-201ENSMUST00000122697 104 ntBASIC1.63□□□□□ -2.15
NcanP55066 Gm25390-201ENSMUST00000157341 103 ntBASIC1.63□□□□□ -2.15
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms