Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm15213-201ENSMUST00000122098 216 ntBASIC1.28□□□□□ -2.2
Traf1P39428 Gm23542-201ENSMUST00000158208 96 ntBASIC1.28□□□□□ -2.2
Traf1P39428 Mir7052-201ENSMUST00000184821 65 ntBASIC1.28□□□□□ -2.2
Traf1P39428 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.28□□□□□ -2.2
Traf1P39428 Gm22421-201ENSMUST00000083058 107 ntBASIC1.28□□□□□ -2.2
Traf1P39428 Mir196b-201ENSMUST00000083509 85 ntBASIC1.28□□□□□ -2.2
Traf1P39428 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.27□□□□□ -2.21
Traf1P39428 Gm25848-201ENSMUST00000116790 144 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Gm14536-201ENSMUST00000118324 138 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Gm14919-201ENSMUST00000120839 390 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Gm15027-201ENSMUST00000120922 138 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Gm24808-201ENSMUST00000157993 118 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Gm22448-201ENSMUST00000179254 107 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Gm20118-201ENSMUST00000187207 162 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Gm28921-201ENSMUST00000190219 378 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Vmn1r-ps13-201ENSMUST00000204697 134 ntBASIC1.27□□□□□ -2.21
Traf1P39428 AC160550.1-201ENSMUST00000228659 181 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Snora41-201ENSMUST00000082668 132 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Mir219a-2-201ENSMUST00000083551 97 ntBASIC1.27□□□□□ -2.21
Traf1P39428 Gm12432-201ENSMUST00000119540 186 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.26□□□□□ -2.21
Traf1P39428 Gm22491-201ENSMUST00000157190 102 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm24942-201ENSMUST00000158328 114 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Traf1P39428 Mir8119-201ENSMUST00000183371 129 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm27420-201ENSMUST00000183823 79 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm44358-201ENSMUST00000196301 98 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm42594-201ENSMUST00000199511 246 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Sva-201ENSMUST00000024059 651 ntAPPRIS P2 TSL 1 (best) BASIC1.26□□□□□ -2.21
Traf1P39428 Gm26447-201ENSMUST00000082448 129 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm25128-201ENSMUST00000083339 76 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm25512-201ENSMUST00000083863 107 ntBASIC1.26□□□□□ -2.21
Traf1P39428 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.26□□□□□ -2.21
Traf1P39428 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.25□□□□□ -2.21
Traf1P39428 Gm23766-201ENSMUST00000103894 80 ntBASIC1.25□□□□□ -2.21
Traf1P39428 Gm22673-201ENSMUST00000104415 131 ntBASIC1.25□□□□□ -2.21
Traf1P39428 Gm25509-201ENSMUST00000116985 106 ntBASIC1.25□□□□□ -2.21
Traf1P39428 n-R5s157-201ENSMUST00000122543 121 ntBASIC1.25□□□□□ -2.21
Traf1P39428 n-R5s63-201ENSMUST00000122756 103 ntBASIC1.25□□□□□ -2.21
Traf1P39428 Gm26213-201ENSMUST00000158582 110 ntBASIC1.25□□□□□ -2.21
Traf1P39428 Gm22118-201ENSMUST00000175593 171 ntBASIC1.25□□□□□ -2.21
Traf1P39428 Gm27419-201ENSMUST00000184576 109 ntBASIC1.25□□□□□ -2.21
Traf1P39428 Gm18188-201ENSMUST00000219386 478 ntBASIC1.25□□□□□ -2.21
Traf1P39428 Gm24204-201ENSMUST00000082950 107 ntBASIC1.25□□□□□ -2.21
Traf1P39428 Gm25875-201ENSMUST00000104323 107 ntBASIC1.24□□□□□ -2.21
Traf1P39428 Gm24221-201ENSMUST00000158833 313 ntBASIC1.24□□□□□ -2.21
Traf1P39428 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.24□□□□□ -2.21
Traf1P39428 Gm29242-201ENSMUST00000186570 457 ntTSL 5 BASIC1.24□□□□□ -2.21
Traf1P39428 Gm38060-201ENSMUST00000194822 464 ntBASIC1.24□□□□□ -2.21
Traf1P39428 Gm44959-201ENSMUST00000209127 231 ntBASIC1.24□□□□□ -2.21
Traf1P39428 AL603630.1-201ENSMUST00000214781 147 ntBASIC1.24□□□□□ -2.21
Traf1P39428 Gm24624-201ENSMUST00000082617 164 ntBASIC1.24□□□□□ -2.21
Traf1P39428 Gm26497-201ENSMUST00000083146 107 ntBASIC1.24□□□□□ -2.21
Traf1P39428 Gm22984-201ENSMUST00000122751 122 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Gm23893-201ENSMUST00000158106 134 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Gm23113-201ENSMUST00000158477 99 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Mir344d-3-201ENSMUST00000175458 80 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Mir6381-201ENSMUST00000183426 87 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Gm27545-201ENSMUST00000184755 202 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Gm28862-201ENSMUST00000188246 163 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Ighv1-23-201ENSMUST00000194625 351 ntAPPRIS P1 BASIC1.23□□□□□ -2.21
Traf1P39428 Gm34015-201ENSMUST00000194908 451 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Gm45616-201ENSMUST00000211711 319 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Gm9795-201ENSMUST00000062156 693 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Gm22743-201ENSMUST00000083445 133 ntBASIC1.23□□□□□ -2.21
Traf1P39428 Gm11856-201ENSMUST00000118712 276 ntBASIC1.22□□□□□ -2.21
Traf1P39428 Gm28579-201ENSMUST00000186143 369 ntBASIC1.22□□□□□ -2.21
Traf1P39428 Gm24453-201ENSMUST00000083346 76 ntBASIC1.22□□□□□ -2.21
Traf1P39428 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.21□□□□□ -2.21
Traf1P39428 Gm23987-201ENSMUST00000117039 129 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Gm23114-201ENSMUST00000158478 117 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Gm22425-201ENSMUST00000158532 138 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Gm22434-201ENSMUST00000158549 122 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Gm25715-201ENSMUST00000158627 125 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Gm23571-201ENSMUST00000180073 127 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Gm21088-201ENSMUST00000190875 316 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Olfr1108-ps1-201ENSMUST00000216930 121 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Gm7240-201ENSMUST00000220769 664 ntBASIC1.21□□□□□ -2.22
Traf1P39428 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.21□□□□□ -2.22
Traf1P39428 Gm24375-201ENSMUST00000104397 132 ntBASIC1.2□□□□□ -2.22
Traf1P39428 Gm10974-201ENSMUST00000107486 126 ntAPPRIS P1 TSL 5 BASIC1.2□□□□□ -2.22
Traf1P39428 Gm23214-201ENSMUST00000122716 157 ntBASIC1.2□□□□□ -2.22
Traf1P39428 Gm22097-201ENSMUST00000157929 278 ntBASIC1.2□□□□□ -2.22
Traf1P39428 Gm23665-201ENSMUST00000158054 62 ntBASIC1.2□□□□□ -2.22
Traf1P39428 Gm24724-201ENSMUST00000158230 107 ntBASIC1.2□□□□□ -2.22
Traf1P39428 Gm25976-201ENSMUST00000158695 130 ntBASIC1.2□□□□□ -2.22
Traf1P39428 Gm22242-201ENSMUST00000175224 118 ntBASIC1.2□□□□□ -2.22
Traf1P39428 Gm27656-201ENSMUST00000185055 80 ntBASIC1.2□□□□□ -2.22
Traf1P39428 AC159896.1-201ENSMUST00000215264 215 ntBASIC1.2□□□□□ -2.22
Traf1P39428 CT033781.2-201ENSMUST00000221113 153 ntBASIC1.2□□□□□ -2.22
Traf1P39428 AC154552.1-201ENSMUST00000222969 202 ntBASIC1.2□□□□□ -2.22
Traf1P39428 Gm25274-201ENSMUST00000104296 135 ntBASIC1.19□□□□□ -2.22
Traf1P39428 Mir669d-2-201ENSMUST00000116854 86 ntBASIC1.19□□□□□ -2.22
Traf1P39428 Mir6951-201ENSMUST00000183910 75 ntBASIC1.19□□□□□ -2.22
Traf1P39428 Gm27521-201ENSMUST00000184022 64 ntBASIC1.19□□□□□ -2.22
Traf1P39428 Mir8116-201ENSMUST00000184134 97 ntBASIC1.19□□□□□ -2.22
Traf1P39428 Gm28016-201ENSMUST00000184594 196 ntBASIC1.19□□□□□ -2.22
Traf1P39428 Gm25683-201ENSMUST00000083940 131 ntBASIC1.19□□□□□ -2.22
Traf1P39428 Gm23996-201ENSMUST00000158062 131 ntBASIC1.18□□□□□ -2.22
Traf1P39428 Gm25615-201ENSMUST00000177836 94 ntBASIC1.18□□□□□ -2.22
Retrieved 100 of 76,532 protein–RNA pairs in 151 ms