Protein–RNA interactions for Protein: P13705

Msh3, DNA mismatch repair protein Msh3, mousemouse

Predictions only

Length 1,091 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3P13705 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.5□□□□□ -2.17
Msh3P13705 Gm26026-201ENSMUST00000122726 123 ntBASIC1.5□□□□□ -2.17
Msh3P13705 Gm25831-201ENSMUST00000158924 163 ntBASIC1.5□□□□□ -2.17
Msh3P13705 Mir3569-201ENSMUST00000185080 58 ntBASIC1.5□□□□□ -2.17
Msh3P13705 Gm45116-201ENSMUST00000207392 275 ntBASIC1.5□□□□□ -2.17
Msh3P13705 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.5□□□□□ -2.17
Msh3P13705 Gm25634-201ENSMUST00000082667 105 ntBASIC1.5□□□□□ -2.17
Msh3P13705 Gm24522-201ENSMUST00000083964 108 ntBASIC1.5□□□□□ -2.17
Msh3P13705 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Gm24121-201ENSMUST00000102029 106 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Gm23011-201ENSMUST00000104148 132 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Gm6897-201ENSMUST00000117714 138 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Gm14758-201ENSMUST00000119104 138 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.49□□□□□ -2.17
Msh3P13705 Gm44408-201ENSMUST00000200205 66 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Gm44384-201ENSMUST00000200208 114 ntBASIC1.49□□□□□ -2.17
Msh3P13705 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.49□□□□□ -2.17
Msh3P13705 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.49□□□□□ -2.17
Msh3P13705 AC154213.2-201ENSMUST00000227138 187 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Gm25142-201ENSMUST00000082698 107 ntBASIC1.49□□□□□ -2.17
Msh3P13705 Gm12815-201ENSMUST00000121737 135 ntBASIC1.48□□□□□ -2.17
Msh3P13705 Gm26468-201ENSMUST00000158644 106 ntBASIC1.48□□□□□ -2.17
Msh3P13705 Gm27585-201ENSMUST00000183717 199 ntBASIC1.48□□□□□ -2.17
Msh3P13705 AC126939.3-201ENSMUST00000226061 166 ntBASIC1.48□□□□□ -2.17
Msh3P13705 Gm25627-201ENSMUST00000084003 153 ntBASIC1.48□□□□□ -2.17
Msh3P13705 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.48□□□□□ -2.17
Msh3P13705 Olfr1222-203ENSMUST00000215816 3796 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Msh3P13705 Gm25992-201ENSMUST00000102437 109 ntBASIC1.47□□□□□ -2.17
Msh3P13705 Gm24902-201ENSMUST00000158126 123 ntBASIC1.47□□□□□ -2.17
Msh3P13705 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Msh3P13705 Gm25935-201ENSMUST00000178746 107 ntBASIC1.47□□□□□ -2.17
Msh3P13705 Gm38183-201ENSMUST00000193189 205 ntBASIC1.47□□□□□ -2.17
Msh3P13705 Gm9805-201ENSMUST00000055305 171 ntAPPRIS P1 BASIC1.47□□□□□ -2.17
Msh3P13705 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.46□□□□□ -2.18
Msh3P13705 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.46□□□□□ -2.18
Msh3P13705 Gm23122-201ENSMUST00000157645 103 ntBASIC1.46□□□□□ -2.18
Msh3P13705 Gm22556-201ENSMUST00000157803 100 ntBASIC1.46□□□□□ -2.18
Msh3P13705 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.46□□□□□ -2.18
Msh3P13705 Gm24375-201ENSMUST00000104397 132 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm25423-201ENSMUST00000157609 107 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm23898-201ENSMUST00000158111 103 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm24076-201ENSMUST00000158179 94 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm25015-201ENSMUST00000158400 128 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm23113-201ENSMUST00000158477 99 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm23141-201ENSMUST00000178682 94 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm27476-201ENSMUST00000183366 104 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm29613-201ENSMUST00000185846 313 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm29544-201ENSMUST00000188860 313 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm28808-201ENSMUST00000190978 313 ntBASIC1.45□□□□□ -2.18
Msh3P13705 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Mir146-201ENSMUST00000083667 65 ntBASIC1.45□□□□□ -2.18
Msh3P13705 Gm14327-202ENSMUST00000108935 1451 ntAPPRIS P1 TSL 1 (best) BASIC1.44□□□□□ -2.18
Msh3P13705 Mir301b-201ENSMUST00000102333 97 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm22545-201ENSMUST00000104350 132 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Snord19-201ENSMUST00000104609 76 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm12309-201ENSMUST00000119889 182 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.44□□□□□ -2.18
Msh3P13705 Gm23170-201ENSMUST00000157158 106 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm24229-201ENSMUST00000158830 118 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm23289-201ENSMUST00000175615 108 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm26426-201ENSMUST00000177866 123 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm26060-201ENSMUST00000180094 123 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Mir7063-201ENSMUST00000184158 91 ntBASIC1.44□□□□□ -2.18
Msh3P13705 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Msh3P13705 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.44□□□□□ -2.18
Msh3P13705 Gm44052-201ENSMUST00000203382 396 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm25697-201ENSMUST00000082902 98 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Gm25409-201ENSMUST00000083764 131 ntBASIC1.44□□□□□ -2.18
Msh3P13705 Tcrg-V4-201ENSMUST00000103554 426 ntAPPRIS P1 BASIC1.43□□□□□ -2.18
Msh3P13705 Gm12449-201ENSMUST00000117572 234 ntBASIC1.43□□□□□ -2.18
Msh3P13705 Gm26049-201ENSMUST00000157313 108 ntBASIC1.43□□□□□ -2.18
Msh3P13705 Gm22586-201ENSMUST00000157507 122 ntBASIC1.43□□□□□ -2.18
Msh3P13705 Gm22082-201ENSMUST00000157587 161 ntBASIC1.43□□□□□ -2.18
Msh3P13705 Gm26004-201ENSMUST00000158804 116 ntBASIC1.43□□□□□ -2.18
Msh3P13705 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.43□□□□□ -2.18
Msh3P13705 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.43□□□□□ -2.18
Msh3P13705 Mir384-201ENSMUST00000083565 88 ntBASIC1.43□□□□□ -2.18
Msh3P13705 Pcdh11x-208ENSMUST00000193899 5394 ntAPPRIS ALT2 TSL 5 BASIC1.43□□□□□ -2.18
Msh3P13705 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.43□□□□□ -2.18
Msh3P13705 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.42□□□□□ -2.18
Msh3P13705 Snord70-201ENSMUST00000104157 87 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Gm24867-201ENSMUST00000104161 107 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Gm22051-201ENSMUST00000117002 127 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Gm24262-201ENSMUST00000157431 144 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Gm23258-201ENSMUST00000158319 106 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Gm23852-201ENSMUST00000158376 77 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Gm25654-201ENSMUST00000158467 88 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Vmn2r-ps78-201ENSMUST00000173350 308 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Gm28409-201ENSMUST00000187064 103 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Gm22744-201ENSMUST00000083444 65 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Mir34a-201ENSMUST00000083559 102 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Mir211-201ENSMUST00000083651 106 ntBASIC1.42□□□□□ -2.18
Msh3P13705 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.42□□□□□ -2.18
Msh3P13705 Olfr1154-202ENSMUST00000215017 2917 ntAPPRIS P1 TSL 5 BASIC1.41□□□□□ -2.18
Msh3P13705 Gm25377-201ENSMUST00000104334 129 ntBASIC1.41□□□□□ -2.18
Msh3P13705 Mir669k-201ENSMUST00000177742 127 ntBASIC1.41□□□□□ -2.18
Msh3P13705 Gm25673-201ENSMUST00000179957 127 ntBASIC1.41□□□□□ -2.18
Msh3P13705 Gm29603-201ENSMUST00000186792 334 ntBASIC1.41□□□□□ -2.18
Msh3P13705 Gm22306-201ENSMUST00000082692 107 ntBASIC1.41□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 144.8 ms