Protein–RNA interactions for Protein: O88689

Pcdha4, Protocadherin alpha-4, mousemouse

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha4O88689 Gm29544-201ENSMUST00000188860 313 ntBASIC2.37□□□□□ -2.03
Pcdha4O88689 Gm28808-201ENSMUST00000190978 313 ntBASIC2.37□□□□□ -2.03
Pcdha4O88689 Mir3961-201ENSMUST00000198795 59 ntBASIC2.37□□□□□ -2.03
Pcdha4O88689 Gm44555-201ENSMUST00000209008 148 ntBASIC2.37□□□□□ -2.03
Pcdha4O88689 Gm45492-201ENSMUST00000211611 288 ntBASIC2.37□□□□□ -2.03
Pcdha4O88689 Zfy2-201ENSMUST00000115891 2816 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
Pcdha4O88689 Gm43373-201ENSMUST00000202552 2870 ntBASIC2.37□□□□□ -2.03
Pcdha4O88689 AC152951.2-201ENSMUST00000218293 3587 ntBASIC2.37□□□□□ -2.03
Pcdha4O88689 Gm44133-202ENSMUST00000204450 2586 ntBASIC2.37□□□□□ -2.03
Pcdha4O88689 Gm22105-201ENSMUST00000116734 116 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm23033-201ENSMUST00000157996 134 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm24634-201ENSMUST00000158672 107 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm25707-201ENSMUST00000175120 96 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm42960-201ENSMUST00000202160 241 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm2511-201ENSMUST00000205521 457 ntTSL 3 BASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm7214-201ENSMUST00000222428 272 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm24461-201ENSMUST00000082735 103 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm24148-201ENSMUST00000082762 80 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.36□□□□□ -2.03
Pcdha4O88689 Olfr794-202ENSMUST00000204820 3044 ntAPPRIS P1 TSL 2 BASIC2.36□□□□□ -2.03
Pcdha4O88689 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.35□□□□□ -2.03
Pcdha4O88689 Traj43-201ENSMUST00000103699 57 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Pcdha4O88689 Snord100-201ENSMUST00000116836 74 ntBASIC2.35□□□□□ -2.03
Pcdha4O88689 Gm24717-201ENSMUST00000157522 124 ntBASIC2.35□□□□□ -2.03
Pcdha4O88689 Gm44057-201ENSMUST00000204547 96 ntBASIC2.35□□□□□ -2.03
Pcdha4O88689 Gm23249-201ENSMUST00000083369 161 ntBASIC2.35□□□□□ -2.03
Pcdha4O88689 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2.34□□□□□ -2.03
Pcdha4O88689 Gm24098-201ENSMUST00000102075 109 ntBASIC2.34□□□□□ -2.03
Pcdha4O88689 Gm25381-201ENSMUST00000102078 109 ntBASIC2.34□□□□□ -2.03
Pcdha4O88689 Gm15536-201ENSMUST00000121411 114 ntBASIC2.34□□□□□ -2.03
Pcdha4O88689 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
Pcdha4O88689 Gm27934-201ENSMUST00000158795 63 ntBASIC2.34□□□□□ -2.03
Pcdha4O88689 Gm9156-201ENSMUST00000189660 463 ntBASIC2.34□□□□□ -2.03
Pcdha4O88689 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.34□□□□□ -2.03
Pcdha4O88689 Gm22681-201ENSMUST00000083853 106 ntBASIC2.34□□□□□ -2.03
Pcdha4O88689 Adgrg4-205ENSMUST00000154818 8857 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
Pcdha4O88689 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2.33□□□□□ -2.04
Pcdha4O88689 Gm25828-201ENSMUST00000157087 95 ntBASIC2.33□□□□□ -2.04
Pcdha4O88689 Gm25882-201ENSMUST00000157784 85 ntBASIC2.33□□□□□ -2.04
Pcdha4O88689 Gm25371-201ENSMUST00000158162 101 ntBASIC2.33□□□□□ -2.04
Pcdha4O88689 Mir6350-201ENSMUST00000183639 105 ntBASIC2.33□□□□□ -2.04
Pcdha4O88689 Gm37027-201ENSMUST00000194642 256 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Pcdha4O88689 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC2.33□□□□□ -2.04
Pcdha4O88689 Gm44921-201ENSMUST00000205290 301 ntBASIC2.33□□□□□ -2.04
Pcdha4O88689 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.33□□□□□ -2.04
Pcdha4O88689 Snord61-201ENSMUST00000083176 71 ntBASIC2.33□□□□□ -2.04
Pcdha4O88689 Gm22738-201ENSMUST00000083440 147 ntBASIC2.33□□□□□ -2.04
Pcdha4O88689 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Pcdha4O88689 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
Pcdha4O88689 Gm24375-201ENSMUST00000104397 132 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 Gm14626-201ENSMUST00000117619 216 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 Gm22946-201ENSMUST00000158558 82 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 Gm24333-201ENSMUST00000175101 84 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 Mir7016-201ENSMUST00000184308 72 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 Gm45791-201ENSMUST00000212908 352 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.32□□□□□ -2.04
Pcdha4O88689 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.32□□□□□ -2.04
Pcdha4O88689 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Pcdha4O88689 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Pcdha4O88689 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 Gm24482-201ENSMUST00000117005 93 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 Gm13433-201ENSMUST00000121701 240 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 Gm27672-201ENSMUST00000183751 204 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 Mir7062-201ENSMUST00000185038 66 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 Gm3724-201ENSMUST00000197957 349 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.31□□□□□ -2.04
Pcdha4O88689 Olfr1181-203ENSMUST00000213190 3934 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
Pcdha4O88689 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Pcdha4O88689 Gm22227-201ENSMUST00000157356 259 ntBASIC2.3□□□□□ -2.04
Pcdha4O88689 Gm23342-201ENSMUST00000158958 115 ntBASIC2.3□□□□□ -2.04
Pcdha4O88689 Gm44976-201ENSMUST00000205543 261 ntBASIC2.3□□□□□ -2.04
Pcdha4O88689 Mir201-201ENSMUST00000083470 66 ntBASIC2.3□□□□□ -2.04
Pcdha4O88689 Mir429-201ENSMUST00000083493 83 ntBASIC2.3□□□□□ -2.04
Pcdha4O88689 Mir423-201ENSMUST00000083584 109 ntBASIC2.3□□□□□ -2.04
Pcdha4O88689 Snora69-201ENSMUST00000083708 131 ntBASIC2.3□□□□□ -2.04
Pcdha4O88689 Gm14567-201ENSMUST00000117155 174 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 Gm23854-201ENSMUST00000158378 108 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 Gm18665-201ENSMUST00000189783 270 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 Gm42719-201ENSMUST00000197393 355 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 Gm25797-201ENSMUST00000082640 107 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 Gm25788-201ENSMUST00000082721 131 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 Mir222-201ENSMUST00000083537 79 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 Mir301-201ENSMUST00000083655 86 ntBASIC2.29□□□□□ -2.04
Pcdha4O88689 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
Pcdha4O88689 Gm26077-201ENSMUST00000104064 123 ntBASIC2.28□□□□□ -2.04
Pcdha4O88689 Mir293-201ENSMUST00000104841 80 ntBASIC2.28□□□□□ -2.04
Pcdha4O88689 Gm26345-201ENSMUST00000157534 120 ntBASIC2.28□□□□□ -2.04
Pcdha4O88689 Gm22727-201ENSMUST00000158090 116 ntBASIC2.28□□□□□ -2.04
Pcdha4O88689 Gm23113-201ENSMUST00000158477 99 ntBASIC2.28□□□□□ -2.04
Pcdha4O88689 Gm27443-201ENSMUST00000184660 98 ntBASIC2.28□□□□□ -2.04
Pcdha4O88689 Gm43381-201ENSMUST00000198553 165 ntBASIC2.28□□□□□ -2.04
Pcdha4O88689 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.28□□□□□ -2.04
Pcdha4O88689 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.27□□□□□ -2.05
Pcdha4O88689 Traj30-201ENSMUST00000103711 59 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
Retrieved 100 of 76,532 protein–RNA pairs in 140.6 ms