Protein–RNA interactions for Protein: O55187

Cbx4, E3 SUMO-protein ligase CBX4, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx4O55187 mt-Atp8-201ENSMUST00000082407 204 ntAPPRIS P1 BASIC1.77□□□□□ -2.13
Cbx4O55187 Mir302d-201ENSMUST00000083513 66 ntBASIC1.77□□□□□ -2.13
Cbx4O55187 Gm25538-201ENSMUST00000101943 107 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Snord89-201ENSMUST00000104516 110 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Gm24683-201ENSMUST00000104840 88 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Gm13588-201ENSMUST00000120026 135 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Gm23209-201ENSMUST00000158667 110 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Gm22911-201ENSMUST00000177920 107 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Gm21064-202ENSMUST00000190583 278 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Gm37997-201ENSMUST00000193515 267 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.76□□□□□ -2.13
Cbx4O55187 Gm24038-201ENSMUST00000082872 159 ntBASIC1.76□□□□□ -2.13
Cbx4O55187 Knl1-203ENSMUST00000099542 6525 ntAPPRIS P1 TSL 5 BASIC1.75□□□□□ -2.13
Cbx4O55187 Gm22337-201ENSMUST00000157721 132 ntBASIC1.75□□□□□ -2.13
Cbx4O55187 Gm27699-201ENSMUST00000183553 180 ntBASIC1.75□□□□□ -2.13
Cbx4O55187 Mir7683-201ENSMUST00000183842 61 ntBASIC1.75□□□□□ -2.13
Cbx4O55187 Gm37778-201ENSMUST00000191732 190 ntBASIC1.75□□□□□ -2.13
Cbx4O55187 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.75□□□□□ -2.13
Cbx4O55187 Gm19194-201ENSMUST00000192015 3774 ntBASIC1.75□□□□□ -2.13
Cbx4O55187 AC160984.1-201ENSMUST00000225855 3154 ntBASIC1.75□□□□□ -2.13
Cbx4O55187 Olfr921-203ENSMUST00000217114 4120 ntAPPRIS P1 TSL 2 BASIC1.74□□□□□ -2.13
Cbx4O55187 Olfr821-203ENSMUST00000214177 1929 ntAPPRIS P1 TSL 5 BASIC1.74□□□□□ -2.13
Cbx4O55187 Gm22482-201ENSMUST00000122563 359 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Gm23656-201ENSMUST00000122626 112 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Gm23655-201ENSMUST00000122627 105 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Gm25884-201ENSMUST00000157782 62 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Gm25836-201ENSMUST00000158918 123 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Gm5900-201ENSMUST00000179862 375 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
Cbx4O55187 Gm42719-201ENSMUST00000197393 355 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Gm44326-201ENSMUST00000198226 101 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC1.74□□□□□ -2.13
Cbx4O55187 Snora3-201ENSMUST00000083082 132 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 n-R5s183-201ENSMUST00000083939 115 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Gm8935-202ENSMUST00000105727 1959 ntBASIC1.74□□□□□ -2.13
Cbx4O55187 Gm23010-201ENSMUST00000104151 126 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Gm26293-201ENSMUST00000104170 84 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Gm24375-201ENSMUST00000104397 132 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Gm23718-201ENSMUST00000157350 307 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC1.73□□□□□ -2.13
Cbx4O55187 Gm24572-201ENSMUST00000175505 88 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Mir7679-201ENSMUST00000183379 63 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Gm44325-201ENSMUST00000196757 77 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 AC160863.1-201ENSMUST00000218412 317 ntBASIC1.73□□□□□ -2.13
Cbx4O55187 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.73□□□□□ -2.13
Cbx4O55187 Olfr805-204ENSMUST00000217219 3314 ntAPPRIS P1 TSL 5 BASIC1.73□□□□□ -2.13
Cbx4O55187 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.72□□□□□ -2.13
Cbx4O55187 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Olfr1044-202ENSMUST00000215171 3266 ntAPPRIS P1 TSL 5 BASIC1.72□□□□□ -2.13
Cbx4O55187 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.72□□□□□ -2.13
Cbx4O55187 Gm23670-201ENSMUST00000157469 119 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Gm24394-201ENSMUST00000158141 123 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Snord87-201ENSMUST00000175437 87 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Gm27722-201ENSMUST00000183908 76 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Mir8090-201ENSMUST00000185078 136 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Gm44322-201ENSMUST00000196830 115 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Gm24151-201ENSMUST00000082758 141 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Gm22686-201ENSMUST00000082847 100 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Gm25627-201ENSMUST00000084003 153 ntBASIC1.72□□□□□ -2.13
Cbx4O55187 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.72□□□□□ -2.13
Cbx4O55187 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.13
Cbx4O55187 Gm24276-201ENSMUST00000102181 110 ntBASIC1.71□□□□□ -2.14
Cbx4O55187 Gm14709-201ENSMUST00000121225 304 ntBASIC1.71□□□□□ -2.14
Cbx4O55187 Gm23113-201ENSMUST00000158477 99 ntBASIC1.71□□□□□ -2.14
Cbx4O55187 Gm37579-201ENSMUST00000194291 142 ntBASIC1.71□□□□□ -2.14
Cbx4O55187 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.71□□□□□ -2.14
Cbx4O55187 Gm45654-201ENSMUST00000210980 123 ntBASIC1.71□□□□□ -2.14
Cbx4O55187 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.71□□□□□ -2.14
Cbx4O55187 Gm23011-201ENSMUST00000104148 132 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Gm25377-201ENSMUST00000104334 129 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Gm25985-201ENSMUST00000122677 107 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Gm23898-201ENSMUST00000158111 103 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Mir1931-201ENSMUST00000158589 119 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Gm26024-201ENSMUST00000158657 322 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Mir6352-201ENSMUST00000184495 116 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Mir3569-201ENSMUST00000185080 58 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Gm44057-201ENSMUST00000204547 96 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Vmn1r75-205ENSMUST00000228268 4376 ntAPPRIS ALT2 BASIC1.7□□□□□ -2.14
Cbx4O55187 AC159625.1-201ENSMUST00000220994 2625 ntBASIC1.7□□□□□ -2.14
Cbx4O55187 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.69□□□□□ -2.14
Cbx4O55187 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Cbx4O55187 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.69□□□□□ -2.14
Cbx4O55187 Gm13467-201ENSMUST00000145568 281 ntTSL 5 BASIC1.69□□□□□ -2.14
Cbx4O55187 Gm25464-201ENSMUST00000175481 107 ntBASIC1.69□□□□□ -2.14
Cbx4O55187 Mir6350-201ENSMUST00000183639 105 ntBASIC1.69□□□□□ -2.14
Cbx4O55187 Snord80-202ENSMUST00000199023 77 ntBASIC1.69□□□□□ -2.14
Cbx4O55187 Gm44921-201ENSMUST00000205290 301 ntBASIC1.69□□□□□ -2.14
Cbx4O55187 Mir186-201ENSMUST00000083497 71 ntBASIC1.69□□□□□ -2.14
Cbx4O55187 Gm24261-201ENSMUST00000083744 104 ntBASIC1.69□□□□□ -2.14
Cbx4O55187 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.69□□□□□ -2.14
Cbx4O55187 Gm26160-201ENSMUST00000158965 63 ntBASIC1.68□□□□□ -2.14
Cbx4O55187 Gm44320-201ENSMUST00000199276 86 ntBASIC1.68□□□□□ -2.14
Cbx4O55187 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.68□□□□□ -2.14
Retrieved 100 of 76,532 protein–RNA pairs in 192.5 ms