Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
Ebf3O08791 Gm15303-201ENSMUST00000118676 2624 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Vmn1r185-204ENSMUST00000227411 4928 ntAPPRIS P1 BASIC2.05□□□□□ -2.08
Ebf3O08791 Snord89-201ENSMUST00000104516 110 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Gm6025-201ENSMUST00000121517 201 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Gm25267-201ENSMUST00000158522 63 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Gm23337-201ENSMUST00000158959 118 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Gm24573-201ENSMUST00000175499 112 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Gm37557-201ENSMUST00000191640 139 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Mir1291-201ENSMUST00000199842 117 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Gm7214-201ENSMUST00000222428 272 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 CT025689.3-201ENSMUST00000223817 301 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Gm22972-201ENSMUST00000083297 131 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Snora34-201ENSMUST00000083402 138 ntBASIC2.05□□□□□ -2.08
Ebf3O08791 Gm45393-201ENSMUST00000211634 2631 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 Gm23655-201ENSMUST00000122627 105 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 n-R5s189-201ENSMUST00000122675 114 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 Gm22554-201ENSMUST00000157798 147 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 Gm22483-201ENSMUST00000157986 274 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 Gm23260-201ENSMUST00000158317 172 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 Gm23813-201ENSMUST00000175153 77 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.04□□□□□ -2.08
Ebf3O08791 Gm37602-201ENSMUST00000195187 3310 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 Gm45492-201ENSMUST00000211611 288 ntBASIC2.04□□□□□ -2.08
Ebf3O08791 Trdn-201ENSMUST00000095762 4514 ntAPPRIS P2 TSL 5 BASIC2.04□□□□□ -2.08
Ebf3O08791 Gm22151-201ENSMUST00000116963 58 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Gm24141-201ENSMUST00000122776 115 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Gm22966-201ENSMUST00000157957 129 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Mir28b-201ENSMUST00000175399 80 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Gm20613-201ENSMUST00000175828 345 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Igkv2-93-1-201ENSMUST00000196774 272 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Gm18546-201ENSMUST00000197245 676 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Gm42855-201ENSMUST00000197388 253 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 AC168062.3-201ENSMUST00000227025 165 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Gm25636-201ENSMUST00000082666 133 ntBASIC2.03□□□□□ -2.08
Ebf3O08791 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Ebf3O08791 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.03□□□□□ -2.09
Ebf3O08791 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.02□□□□□ -2.09
Ebf3O08791 Gm14536-201ENSMUST00000118324 138 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm6952-201ENSMUST00000118629 159 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm15027-201ENSMUST00000120922 138 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm22477-201ENSMUST00000122569 316 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm24717-201ENSMUST00000157522 124 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm23197-201ENSMUST00000158809 112 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm26157-201ENSMUST00000158974 126 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Mir7016-201ENSMUST00000184308 72 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm44482-201ENSMUST00000199232 103 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm44666-201ENSMUST00000208544 391 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Olfr1421-ps1-201ENSMUST00000208900 208 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 AC164086.1-201ENSMUST00000221038 289 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm26922-201ENSMUST00000082687 72 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm22683-201ENSMUST00000082854 137 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Mir186-201ENSMUST00000083497 71 ntBASIC2.02□□□□□ -2.09
Ebf3O08791 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Ebf3O08791 Gm24984-201ENSMUST00000104454 133 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Gm24595-201ENSMUST00000122501 110 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Gm11192-201ENSMUST00000127017 151 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Ebf3O08791 Gm23469-201ENSMUST00000157131 104 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Gm25980-201ENSMUST00000157176 218 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Gm24916-201ENSMUST00000157287 79 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Gm24770-201ENSMUST00000158505 92 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Gm23342-201ENSMUST00000158958 115 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Ebf3O08791 Gm44564-201ENSMUST00000207985 180 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Gm25124-201ENSMUST00000083345 164 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Gm22866-201ENSMUST00000083947 177 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Tlr8-201ENSMUST00000049023 3158 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
Ebf3O08791 Gm44114-201ENSMUST00000203270 2727 ntBASIC2.01□□□□□ -2.09
Ebf3O08791 Olfr576-201ENSMUST00000098213 3132 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Ebf3O08791 Gm45518-201ENSMUST00000210776 2583 ntTSL 1 (best) BASIC2□□□□□ -2.09
Ebf3O08791 Gm23772-201ENSMUST00000104433 102 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm25060-201ENSMUST00000157374 130 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm23324-201ENSMUST00000157421 131 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm23858-201ENSMUST00000158384 106 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm26160-201ENSMUST00000158965 63 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm27898-201ENSMUST00000183987 80 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm8508-201ENSMUST00000061226 363 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm24461-201ENSMUST00000082735 103 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm24044-201ENSMUST00000083107 156 ntBASIC2□□□□□ -2.09
Ebf3O08791 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2□□□□□ -2.09
Ebf3O08791 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.99□□□□□ -2.09
Ebf3O08791 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.99□□□□□ -2.09
Ebf3O08791 Gm13560-201ENSMUST00000121865 329 ntBASIC1.99□□□□□ -2.09
Ebf3O08791 Gm24277-201ENSMUST00000158661 104 ntBASIC1.99□□□□□ -2.09
Ebf3O08791 Mir6352-201ENSMUST00000184495 116 ntBASIC1.99□□□□□ -2.09
Ebf3O08791 Gm21064-202ENSMUST00000190583 278 ntBASIC1.99□□□□□ -2.09
Ebf3O08791 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.99□□□□□ -2.09
Ebf3O08791 Gm22681-201ENSMUST00000083853 106 ntBASIC1.99□□□□□ -2.09
Ebf3O08791 Gm43473-201ENSMUST00000200442 5997 ntBASIC1.99□□□□□ -2.09
Ebf3O08791 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Ebf3O08791 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC1.99□□□□□ -2.09
Ebf3O08791 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC1.98□□□□□ -2.09
Ebf3O08791 Mir374b-201ENSMUST00000102314 95 ntBASIC1.98□□□□□ -2.09
Ebf3O08791 Gm24598-201ENSMUST00000122510 74 ntBASIC1.98□□□□□ -2.09
Ebf3O08791 Gm22551-201ENSMUST00000157795 103 ntBASIC1.98□□□□□ -2.09
Ebf3O08791 Gm22727-201ENSMUST00000158090 116 ntBASIC1.98□□□□□ -2.09
Ebf3O08791 Gm25711-201ENSMUST00000158633 128 ntBASIC1.98□□□□□ -2.09
Ebf3O08791 Gm25402-201ENSMUST00000082966 131 ntBASIC1.98□□□□□ -2.09
Ebf3O08791 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC1.98□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 189.8 ms