Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Ifi209-201ENSMUST00000056071 3439 ntAPPRIS P1 TSL 1 (best) BASIC3.22□□□□□ -1.89
Nubp1Q9R060 Gm22023-201ENSMUST00000104354 130 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Gm22071-201ENSMUST00000116857 83 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Gm22679-201ENSMUST00000116975 100 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Gm23791-201ENSMUST00000122553 293 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Gm24000-201ENSMUST00000158063 89 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Gm22332-201ENSMUST00000158072 126 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Mir6376-201ENSMUST00000185149 131 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Gm29535-201ENSMUST00000185723 109 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Gm28143-201ENSMUST00000191082 109 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Vmn1r80-209ENSMUST00000228578 11005 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Nubp1Q9R060 AC104897.1-201ENSMUST00000222638 3628 ntBASIC3.22□□□□□ -1.89
Nubp1Q9R060 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Nubp1Q9R060 Vmn1r29-203ENSMUST00000227761 4671 ntAPPRIS P1 BASIC3.22□□□□□ -1.89
Nubp1Q9R060 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.21□□□□□ -1.9
Nubp1Q9R060 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.21□□□□□ -1.9
Nubp1Q9R060 Gm25090-201ENSMUST00000104000 132 ntBASIC3.21□□□□□ -1.9
Nubp1Q9R060 Gm22772-201ENSMUST00000104451 121 ntBASIC3.21□□□□□ -1.9
Nubp1Q9R060 n-R5s73-201ENSMUST00000122508 107 ntBASIC3.21□□□□□ -1.9
Nubp1Q9R060 Gm24947-201ENSMUST00000158334 110 ntBASIC3.21□□□□□ -1.9
Nubp1Q9R060 Gm26141-201ENSMUST00000175299 126 ntBASIC3.21□□□□□ -1.9
Nubp1Q9R060 Mir7k-201ENSMUST00000184115 110 ntBASIC3.21□□□□□ -1.9
Nubp1Q9R060 Gm22454-201ENSMUST00000082583 107 ntBASIC3.21□□□□□ -1.9
Nubp1Q9R060 Olfr713-202ENSMUST00000213623 6329 ntAPPRIS P1 TSL 5 BASIC3.21□□□□□ -1.9
Nubp1Q9R060 Gm45257-201ENSMUST00000210301 3998 ntBASIC3.2□□□□□ -1.9
Nubp1Q9R060 Olfr1240-202ENSMUST00000216123 4603 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Gm45178-201ENSMUST00000207744 4110 ntBASIC3.2□□□□□ -1.9
Nubp1Q9R060 Olfr65-203ENSMUST00000214300 2855 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Vmn1r14-202ENSMUST00000227209 6857 ntAPPRIS ALT2 BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Ighv3-5-201ENSMUST00000103479 299 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Snord78-201ENSMUST00000104032 66 ntBASIC3.2□□□□□ -1.9
Nubp1Q9R060 Gm14816-201ENSMUST00000117174 294 ntBASIC3.2□□□□□ -1.9
Nubp1Q9R060 Gm15949-201ENSMUST00000129485 126 ntTSL 3 BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Gm45268-201ENSMUST00000210046 370 ntBASIC3.2□□□□□ -1.9
Nubp1Q9R060 Gm22827-201ENSMUST00000083766 107 ntBASIC3.2□□□□□ -1.9
Nubp1Q9R060 Gm32014-202ENSMUST00000215328 4168 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Dpp10-201ENSMUST00000112603 4477 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Gm45389-201ENSMUST00000211163 3399 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
Nubp1Q9R060 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nubp1Q9R060 Gm45809-201ENSMUST00000211661 3894 ntBASIC3.19□□□□□ -1.9
Nubp1Q9R060 Gm22988-201ENSMUST00000122759 144 ntBASIC3.19□□□□□ -1.9
Nubp1Q9R060 Gm25860-201ENSMUST00000158252 126 ntBASIC3.19□□□□□ -1.9
Nubp1Q9R060 Gm22890-201ENSMUST00000158642 144 ntBASIC3.19□□□□□ -1.9
Nubp1Q9R060 Gm24345-201ENSMUST00000158706 124 ntBASIC3.19□□□□□ -1.9
Nubp1Q9R060 Mir3092-201ENSMUST00000174954 96 ntBASIC3.19□□□□□ -1.9
Nubp1Q9R060 Olfr1370-203ENSMUST00000215357 4285 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
Nubp1Q9R060 AC152951.2-201ENSMUST00000218293 3587 ntBASIC3.18□□□□□ -1.9
Nubp1Q9R060 Gm42993-201ENSMUST00000196856 7325 ntBASIC3.18□□□□□ -1.9
Nubp1Q9R060 Olfr789-201ENSMUST00000213236 4235 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
Nubp1Q9R060 Gm26273-201ENSMUST00000104180 131 ntBASIC3.18□□□□□ -1.9
Nubp1Q9R060 Gm23181-201ENSMUST00000158685 110 ntBASIC3.18□□□□□ -1.9
Nubp1Q9R060 AC130477.2-201ENSMUST00000228158 274 ntBASIC3.18□□□□□ -1.9
Nubp1Q9R060 Gm24626-201ENSMUST00000082621 161 ntBASIC3.18□□□□□ -1.9
Nubp1Q9R060 Snora41-201ENSMUST00000082668 132 ntBASIC3.18□□□□□ -1.9
Nubp1Q9R060 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nubp1Q9R060 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.17□□□□□ -1.9
Nubp1Q9R060 Dst-201ENSMUST00000097785 23251 ntAPPRIS P4 TSL 1 (best) BASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm26339-201ENSMUST00000102368 99 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm25308-201ENSMUST00000104171 158 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm22319-201ENSMUST00000157147 122 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm23602-201ENSMUST00000157258 132 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm27592-201ENSMUST00000157729 126 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm23384-201ENSMUST00000158593 103 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm22174-201ENSMUST00000175050 125 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm22692-201ENSMUST00000175055 125 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm27634-201ENSMUST00000175060 126 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm22460-201ENSMUST00000175269 124 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm24365-201ENSMUST00000175384 125 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm44310-201ENSMUST00000175424 126 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm22639-201ENSMUST00000175591 125 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm24979-201ENSMUST00000178626 126 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm28010-201ENSMUST00000179485 126 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm27743-201ENSMUST00000185136 126 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 n-TSaga9-201ENSMUST00000197675 107 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm9765-201ENSMUST00000043170 321 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm25199-201ENSMUST00000083095 104 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm24533-201ENSMUST00000083138 196 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm23249-201ENSMUST00000083369 161 ntBASIC3.17□□□□□ -1.9
Nubp1Q9R060 Ankrd28-207ENSMUST00000227863 6616 ntAPPRIS ALT1 BASIC3.17□□□□□ -1.9
Nubp1Q9R060 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Nubp1Q9R060 F8-201ENSMUST00000033539 9784 ntAPPRIS P3 TSL 1 (best) BASIC3.17□□□□□ -1.9
Nubp1Q9R060 Olfr17-202ENSMUST00000210568 3666 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
Nubp1Q9R060 Dnah7b-201ENSMUST00000069293 12314 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nubp1Q9R060 Olfr1450-203ENSMUST00000213925 3075 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nubp1Q9R060 Gm38706-201ENSMUST00000182397 2617 ntBASIC3.16□□□□□ -1.9
Nubp1Q9R060 Zmym2-201ENSMUST00000022511 6974 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nubp1Q9R060 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.16□□□□□ -1.9
Nubp1Q9R060 Gm23530-201ENSMUST00000104564 137 ntBASIC3.16□□□□□ -1.9
Nubp1Q9R060 Gm22151-201ENSMUST00000116963 58 ntBASIC3.16□□□□□ -1.9
Nubp1Q9R060 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC3.16□□□□□ -1.9
Nubp1Q9R060 Gm23753-201ENSMUST00000157575 149 ntBASIC3.16□□□□□ -1.9
Nubp1Q9R060 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC3.16□□□□□ -1.9
Nubp1Q9R060 Gm37698-201ENSMUST00000192605 463 ntBASIC3.16□□□□□ -1.9
Nubp1Q9R060 Mir429-201ENSMUST00000083493 83 ntBASIC3.16□□□□□ -1.9
Nubp1Q9R060 Mir411-201ENSMUST00000083543 82 ntBASIC3.16□□□□□ -1.9
Nubp1Q9R060 Gm14443-201ENSMUST00000109054 4516 ntAPPRIS P1 TSL 5 BASIC3.16□□□□□ -1.9
Nubp1Q9R060 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
Nubp1Q9R060 AI504432-201ENSMUST00000070085 5569 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
Nubp1Q9R060 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 132.5 ms