Protein–RNA interactions for Protein: Q9JIF7

Copb1, Coatomer subunit beta, mousemouse

Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Copb1Q9JIF7 Gm6109-201ENSMUST00000223297 348 ntBASIC2.09□□□□□ -2.07
Copb1Q9JIF7 Agmo-201ENSMUST00000049874 2423 ntAPPRIS P1 TSL 1 (best) BASIC2.09□□□□□ -2.08
Copb1Q9JIF7 AC122828.3-201ENSMUST00000223019 3915 ntBASIC2.09□□□□□ -2.08
Copb1Q9JIF7 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.09□□□□□ -2.08
Copb1Q9JIF7 Gm23950-201ENSMUST00000104026 129 ntBASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Gm22494-201ENSMUST00000104495 128 ntBASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Gm24632-201ENSMUST00000122770 323 ntBASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Gm25961-201ENSMUST00000157174 135 ntBASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Gm24177-201ENSMUST00000158927 131 ntBASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Gm28434-201ENSMUST00000187738 500 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Gm5002-201ENSMUST00000207145 223 ntBASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Gm25813-201ENSMUST00000082748 191 ntBASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Mir30d-201ENSMUST00000083503 82 ntBASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Olfr1253-203ENSMUST00000215185 4984 ntAPPRIS P1 TSL 5 BASIC2.08□□□□□ -2.08
Copb1Q9JIF7 Gm25090-201ENSMUST00000104000 132 ntBASIC2.07□□□□□ -2.08
Copb1Q9JIF7 Gm23990-201ENSMUST00000117031 117 ntBASIC2.07□□□□□ -2.08
Copb1Q9JIF7 Gm26412-201ENSMUST00000157666 55 ntBASIC2.07□□□□□ -2.08
Copb1Q9JIF7 Gm25996-201ENSMUST00000175393 117 ntBASIC2.07□□□□□ -2.08
Copb1Q9JIF7 Gm38183-201ENSMUST00000193189 205 ntBASIC2.07□□□□□ -2.08
Copb1Q9JIF7 Igkv14-118-1-201ENSMUST00000198645 334 ntBASIC2.07□□□□□ -2.08
Copb1Q9JIF7 Gm3333-201ENSMUST00000221637 452 ntTSL 5 BASIC2.07□□□□□ -2.08
Copb1Q9JIF7 Mir155-201ENSMUST00000083463 65 ntBASIC2.07□□□□□ -2.08
Copb1Q9JIF7 Olfr1442-202ENSMUST00000207341 3126 ntAPPRIS P1 TSL 3 BASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Gm24984-201ENSMUST00000104454 133 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Gm25985-201ENSMUST00000122677 107 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Rnu7-201ENSMUST00000158458 62 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Gm25267-201ENSMUST00000158522 63 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Gm24131-201ENSMUST00000158539 107 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Gm24837-201ENSMUST00000158683 81 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Gm24106-201ENSMUST00000175498 127 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Mir466b-1-201ENSMUST00000177988 82 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Gm22286-201ENSMUST00000179708 107 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Snord80-202ENSMUST00000199023 77 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Snord118-201ENSMUST00000082965 135 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 Gm24929-201ENSMUST00000083403 139 ntBASIC2.06□□□□□ -2.08
Copb1Q9JIF7 n-R5s200-201ENSMUST00000104194 113 ntBASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gm6025-201ENSMUST00000121517 201 ntBASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gm15611-201ENSMUST00000146928 406 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gm23048-201ENSMUST00000157237 129 ntBASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gm26157-201ENSMUST00000158974 126 ntBASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gm24656-201ENSMUST00000177548 132 ntBASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.05□□□□□ -2.08
Copb1Q9JIF7 AC125488.1-201ENSMUST00000219586 212 ntBASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gm7214-201ENSMUST00000222428 272 ntBASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gm29106-201ENSMUST00000186264 4012 ntAPPRIS P1 TSL 5 BASIC2.05□□□□□ -2.08
Copb1Q9JIF7 Gm43753-201ENSMUST00000196539 3309 ntBASIC2.04□□□□□ -2.08
Copb1Q9JIF7 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.04□□□□□ -2.08
Copb1Q9JIF7 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.04□□□□□ -2.08
Copb1Q9JIF7 Gm14914-201ENSMUST00000117576 2031 ntBASIC2.04□□□□□ -2.08
Copb1Q9JIF7 Gm25825-201ENSMUST00000157091 124 ntBASIC2.04□□□□□ -2.08
Copb1Q9JIF7 Gm25599-201ENSMUST00000157816 103 ntBASIC2.04□□□□□ -2.08
Copb1Q9JIF7 Gm23678-201ENSMUST00000083157 107 ntBASIC2.04□□□□□ -2.08
Copb1Q9JIF7 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC2.04□□□□□ -2.08
Copb1Q9JIF7 Gm23578-201ENSMUST00000103943 104 ntBASIC2.03□□□□□ -2.08
Copb1Q9JIF7 Gm42960-201ENSMUST00000202160 241 ntBASIC2.03□□□□□ -2.08
Copb1Q9JIF7 Gm25636-201ENSMUST00000082666 133 ntBASIC2.03□□□□□ -2.08
Copb1Q9JIF7 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.03□□□□□ -2.08
Copb1Q9JIF7 Snord89-201ENSMUST00000104516 110 ntBASIC2.02□□□□□ -2.09
Copb1Q9JIF7 Gm22476-201ENSMUST00000158902 100 ntBASIC2.02□□□□□ -2.09
Copb1Q9JIF7 Gm28912-201ENSMUST00000189001 234 ntBASIC2.02□□□□□ -2.09
Copb1Q9JIF7 Gm43749-201ENSMUST00000199345 352 ntBASIC2.02□□□□□ -2.09
Copb1Q9JIF7 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC2.02□□□□□ -2.09
Copb1Q9JIF7 AC098718.1-201ENSMUST00000226166 175 ntBASIC2.02□□□□□ -2.09
Copb1Q9JIF7 Mir93-201ENSMUST00000083593 88 ntBASIC2.02□□□□□ -2.09
Copb1Q9JIF7 Gm22723-201ENSMUST00000083820 129 ntBASIC2.02□□□□□ -2.09
Copb1Q9JIF7 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
Copb1Q9JIF7 Traj39-201ENSMUST00000103703 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Gm26293-201ENSMUST00000104170 84 ntBASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Gm6444-201ENSMUST00000119611 458 ntBASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Gm3848-201ENSMUST00000136693 299 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Gm24783-201ENSMUST00000157639 100 ntBASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Gm16404-201ENSMUST00000177739 468 ntBASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Gm14598-201ENSMUST00000180109 468 ntBASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Gm14625-201ENSMUST00000180231 468 ntBASIC2.01□□□□□ -2.09
Copb1Q9JIF7 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Gm5010-201ENSMUST00000213131 260 ntBASIC2.01□□□□□ -2.09
Copb1Q9JIF7 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm26624-201ENSMUST00000181486 3769 ntTSL 5 BASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm21940-201ENSMUST00000204940 2278 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm24276-201ENSMUST00000102181 110 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm23010-201ENSMUST00000104151 126 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm23655-201ENSMUST00000122627 105 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm25113-201ENSMUST00000157185 143 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm23043-201ENSMUST00000157890 109 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm24001-201ENSMUST00000158463 85 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm25836-201ENSMUST00000158918 123 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm3211-201ENSMUST00000172721 304 ntTSL 3 BASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm24333-201ENSMUST00000175101 84 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Mir7026-201ENSMUST00000184384 67 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm9156-201ENSMUST00000189660 463 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Mir3961-201ENSMUST00000198795 59 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm45654-201ENSMUST00000210980 123 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm40604-202ENSMUST00000219541 522 ntTSL 5 BASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm25081-201ENSMUST00000082534 108 ntBASIC2□□□□□ -2.09
Copb1Q9JIF7 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Copb1Q9JIF7 Olfr389-203ENSMUST00000215418 3417 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Copb1Q9JIF7 Olfr229-202ENSMUST00000214904 3125 ntAPPRIS P1 TSL 5 BASIC2□□□□□ -2.09
Copb1Q9JIF7 Gm13345-201ENSMUST00000121928 228 ntBASIC1.99□□□□□ -2.09
Retrieved 100 of 76,532 protein–RNA pairs in 173 ms