Protein–RNA interactions for Protein: Q9ER60

Scn4a, Sodium channel protein type 4 subunit alpha, mousemouse

Predictions only

Length 1,841 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn4aQ9ER60 Gm27540-201ENSMUST00000184950 187 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 4921527H02Rik-201ENSMUST00000196028 246 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC1.19□□□□□ -2.22
Scn4aQ9ER60 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm23625-201ENSMUST00000082457 100 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm23404-201ENSMUST00000082543 97 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Snord1a-201ENSMUST00000083160 74 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Mir496a-201ENSMUST00000093627 79 ntBASIC1.19□□□□□ -2.22
Scn4aQ9ER60 Gm24588-201ENSMUST00000116696 83 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Gm11798-201ENSMUST00000119150 421 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Gm7958-201ENSMUST00000178255 468 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Gm7950-201ENSMUST00000179633 468 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Gm25936-201ENSMUST00000179952 114 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Gm27997-201ENSMUST00000184942 69 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Gm43602-201ENSMUST00000196772 300 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 AC116589.4-201ENSMUST00000222390 216 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Sycp1-ps1-201ENSMUST00000207882 2768 ntBASIC1.18□□□□□ -2.22
Scn4aQ9ER60 Gm45886-201ENSMUST00000148141 342 ntTSL 5 BASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm24808-201ENSMUST00000157993 118 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm25434-201ENSMUST00000158278 167 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm24499-201ENSMUST00000158446 104 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm23474-201ENSMUST00000158884 75 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm24818-201ENSMUST00000175093 161 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm26968-201ENSMUST00000182894 481 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Mir6904-201ENSMUST00000183443 67 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 AC152414.2-201ENSMUST00000219620 537 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
Scn4aQ9ER60 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm24793-201ENSMUST00000104289 132 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm26363-201ENSMUST00000158866 83 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Mir6380-201ENSMUST00000184334 81 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 CT010449.1-201ENSMUST00000220624 153 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Gm22364-201ENSMUST00000083097 98 ntBASIC1.17□□□□□ -2.22
Scn4aQ9ER60 Mir759-201ENSMUST00000103254 98 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm14919-201ENSMUST00000120839 390 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm23656-201ENSMUST00000122626 112 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm22537-201ENSMUST00000158172 199 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm28849-201ENSMUST00000188127 174 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm28330-201ENSMUST00000190353 171 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 6430573P05Rik-201ENSMUST00000192562 508 ntTSL 5 BASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Mir465d-201ENSMUST00000196314 58 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm44063-201ENSMUST00000203307 376 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm22884-201ENSMUST00000083127 140 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm24163-201ENSMUST00000093660 132 ntBASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm21876-201ENSMUST00000096511 282 ntAPPRIS P1 TSL 5 BASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Snhg14-209ENSMUST00000188976 2193 ntTSL 1 (best) BASIC1.16□□□□□ -2.22
Scn4aQ9ER60 Gm14937-201ENSMUST00000119709 208 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 Gm6025-201ENSMUST00000121517 201 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 Gm25838-201ENSMUST00000158920 120 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 Mir7675-201ENSMUST00000184262 58 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 Olfr375-ps1-201ENSMUST00000198131 249 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 Gm24208-201ENSMUST00000082783 135 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 Gm23845-201ENSMUST00000083834 152 ntBASIC1.15□□□□□ -2.22
Scn4aQ9ER60 Gm13518-201ENSMUST00000120018 233 ntBASIC1.15□□□□□ -2.23
Scn4aQ9ER60 Gm23982-201ENSMUST00000157141 106 ntBASIC1.15□□□□□ -2.23
Scn4aQ9ER60 Gm22485-201ENSMUST00000157990 109 ntBASIC1.15□□□□□ -2.23
Scn4aQ9ER60 Gm27640-201ENSMUST00000184580 147 ntBASIC1.15□□□□□ -2.23
Scn4aQ9ER60 Gm37693-201ENSMUST00000194562 234 ntBASIC1.15□□□□□ -2.23
Scn4aQ9ER60 Gm45313-201ENSMUST00000210584 178 ntBASIC1.15□□□□□ -2.23
Scn4aQ9ER60 Gm22248-201ENSMUST00000082482 150 ntBASIC1.15□□□□□ -2.23
Scn4aQ9ER60 Gm23406-201ENSMUST00000082537 122 ntBASIC1.15□□□□□ -2.23
Scn4aQ9ER60 Gm25885-201ENSMUST00000157779 109 ntBASIC1.14□□□□□ -2.23
Scn4aQ9ER60 Mir5104-201ENSMUST00000175319 94 ntBASIC1.14□□□□□ -2.23
Scn4aQ9ER60 Mir6389-201ENSMUST00000183661 102 ntBASIC1.14□□□□□ -2.23
Scn4aQ9ER60 Gm34139-201ENSMUST00000196166 294 ntBASIC1.14□□□□□ -2.23
Scn4aQ9ER60 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.14□□□□□ -2.23
Scn4aQ9ER60 AC154636.2-201ENSMUST00000222538 161 ntBASIC1.14□□□□□ -2.23
Scn4aQ9ER60 Gm22663-201ENSMUST00000158721 102 ntBASIC1.13□□□□□ -2.23
Scn4aQ9ER60 Gm24366-201ENSMUST00000175383 86 ntBASIC1.13□□□□□ -2.23
Scn4aQ9ER60 Selenok-ps4-201ENSMUST00000178835 277 ntBASIC1.13□□□□□ -2.23
Scn4aQ9ER60 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.13□□□□□ -2.23
Scn4aQ9ER60 Zfp654-201ENSMUST00000052588 4741 ntAPPRIS P3 TSL 1 (best) BASIC1.13□□□□□ -2.23
Scn4aQ9ER60 Gm23262-201ENSMUST00000158323 168 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm28008-201ENSMUST00000184021 186 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Mir6419-201ENSMUST00000184784 113 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm20144-201ENSMUST00000203031 165 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 AC164086.1-201ENSMUST00000221038 289 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 AC166341.3-201ENSMUST00000221861 114 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm14536-201ENSMUST00000118324 138 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm14307-201ENSMUST00000118930 291 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm15027-201ENSMUST00000120922 138 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm14297-201ENSMUST00000129110 291 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm16362-201ENSMUST00000135189 214 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm23101-201ENSMUST00000157550 137 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm38407-201ENSMUST00000218017 474 ntTSL 2 BASIC1.12□□□□□ -2.23
Scn4aQ9ER60 AC154747.1-201ENSMUST00000225265 239 ntBASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm10542-201ENSMUST00000097586 273 ntAPPRIS P1 TSL 5 BASIC1.12□□□□□ -2.23
Scn4aQ9ER60 Gm22689-201ENSMUST00000102452 110 ntBASIC1.11□□□□□ -2.23
Scn4aQ9ER60 Traj52-201ENSMUST00000103691 66 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Scn4aQ9ER60 Mir1904-201ENSMUST00000122702 80 ntBASIC1.11□□□□□ -2.23
Scn4aQ9ER60 Gm23640-201ENSMUST00000157860 104 ntBASIC1.11□□□□□ -2.23
Scn4aQ9ER60 Gm23759-201ENSMUST00000158351 268 ntBASIC1.11□□□□□ -2.23
Scn4aQ9ER60 Tmem167-ps2-201ENSMUST00000190251 214 ntBASIC1.11□□□□□ -2.23
Scn4aQ9ER60 mt-Nd4-201ENSMUST00000082414 1378 ntAPPRIS P1 BASIC1.11□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 265.1 ms