Protein–RNA interactions for Protein: Q9D1D6

Cthrc1, Collagen triple helix repeat-containing protein 1, mousemouse

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cthrc1Q9D1D6 Gm22686-201ENSMUST00000082847 100 ntBASIC2.03□□□□□ -2.08
Cthrc1Q9D1D6 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC2.03□□□□□ -2.08
Cthrc1Q9D1D6 Gm12941-201ENSMUST00000117934 220 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Gm23043-201ENSMUST00000157890 109 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Gm24900-201ENSMUST00000158128 134 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Gm23760-201ENSMUST00000158350 116 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Gm22264-201ENSMUST00000178200 107 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Gm28912-201ENSMUST00000189001 234 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Gm25820-202ENSMUST00000197479 128 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Gm24929-201ENSMUST00000083403 139 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Mir300-201ENSMUST00000083485 79 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Mir93-201ENSMUST00000083593 88 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Mir301-201ENSMUST00000083655 86 ntBASIC2.02□□□□□ -2.09
Cthrc1Q9D1D6 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Gm6952-201ENSMUST00000118629 159 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Gm24010-201ENSMUST00000157731 282 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Gm16404-201ENSMUST00000177739 468 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Gm14598-201ENSMUST00000180109 468 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Gm14625-201ENSMUST00000180231 468 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Mir7226-201ENSMUST00000184953 60 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Gm23678-201ENSMUST00000083157 107 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Mir322-201ENSMUST00000083484 95 ntBASIC2.01□□□□□ -2.09
Cthrc1Q9D1D6 Gm25599-201ENSMUST00000157816 103 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 Gm22768-201ENSMUST00000158366 153 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 Gm22476-201ENSMUST00000158902 100 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 Gm24333-201ENSMUST00000175101 84 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 Gm22348-201ENSMUST00000178674 79 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 Mir6995-201ENSMUST00000183658 71 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 Gm5010-201ENSMUST00000213131 260 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 AC098718.1-201ENSMUST00000226166 175 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2□□□□□ -2.09
Cthrc1Q9D1D6 Gm24237-201ENSMUST00000157790 132 ntBASIC1.99□□□□□ -2.09
Cthrc1Q9D1D6 Gm24770-201ENSMUST00000158505 92 ntBASIC1.99□□□□□ -2.09
Cthrc1Q9D1D6 Gm23548-201ENSMUST00000158963 106 ntBASIC1.99□□□□□ -2.09
Cthrc1Q9D1D6 AC125488.1-201ENSMUST00000219586 212 ntBASIC1.99□□□□□ -2.09
Cthrc1Q9D1D6 Gm14327-201ENSMUST00000099001 192 ntTSL 5 BASIC1.99□□□□□ -2.09
Cthrc1Q9D1D6 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC1.99□□□□□ -2.09
Cthrc1Q9D1D6 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Gm24984-201ENSMUST00000104454 133 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Gm23990-201ENSMUST00000117031 117 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Gm23718-201ENSMUST00000157350 307 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Gm22159-201ENSMUST00000158412 130 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Mir466b-1-201ENSMUST00000177988 82 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Gm22286-201ENSMUST00000179708 107 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Gm37693-201ENSMUST00000194562 234 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 AC134601.3-201ENSMUST00000221682 154 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Gm22704-201ENSMUST00000083027 137 ntBASIC1.98□□□□□ -2.09
Cthrc1Q9D1D6 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Gm23578-201ENSMUST00000103943 104 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 n-R5s200-201ENSMUST00000104194 113 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Gm14536-201ENSMUST00000118324 138 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Gm15027-201ENSMUST00000120922 138 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Gm24851-201ENSMUST00000158028 103 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Gm22606-201ENSMUST00000158290 103 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Mir3086-201ENSMUST00000175072 87 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Gm21064-202ENSMUST00000190583 278 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Snord43-201ENSMUST00000199549 108 ntBASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Olfr777-202ENSMUST00000204573 5407 ntAPPRIS P1 TSL 5 BASIC1.97□□□□□ -2.09
Cthrc1Q9D1D6 Gm22148-201ENSMUST00000104445 107 ntBASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 Gm13976-201ENSMUST00000154367 479 ntTSL 3 BASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 Gm25464-201ENSMUST00000175481 107 ntBASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 C920009B18Rik-204ENSMUST00000181733 123 ntBASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 Mir6997-201ENSMUST00000184313 71 ntBASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 Gm44057-201ENSMUST00000204547 96 ntBASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 AC192091.2-201ENSMUST00000217869 117 ntBASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 Gm24038-201ENSMUST00000082872 159 ntBASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 Olfr711-203ENSMUST00000216335 4724 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 Olfr1029-202ENSMUST00000217244 3743 ntAPPRIS P1 TSL 5 BASIC1.96□□□□□ -2.1
Cthrc1Q9D1D6 Gm26077-201ENSMUST00000104064 123 ntBASIC1.95□□□□□ -2.1
Cthrc1Q9D1D6 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC1.95□□□□□ -2.1
Cthrc1Q9D1D6 Gm24131-201ENSMUST00000158539 107 ntBASIC1.95□□□□□ -2.1
Cthrc1Q9D1D6 Gm25368-201ENSMUST00000158847 131 ntBASIC1.95□□□□□ -2.1
Cthrc1Q9D1D6 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.95□□□□□ -2.1
Cthrc1Q9D1D6 Gm44326-201ENSMUST00000198226 101 ntBASIC1.95□□□□□ -2.1
Cthrc1Q9D1D6 Mir222-201ENSMUST00000083537 79 ntBASIC1.95□□□□□ -2.1
Cthrc1Q9D1D6 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Gm23950-201ENSMUST00000104026 129 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Gm26293-201ENSMUST00000104170 84 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Mir3096-201ENSMUST00000116685 71 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Gm13922-201ENSMUST00000119505 156 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Gm26160-201ENSMUST00000158965 63 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Mir6388-201ENSMUST00000184417 75 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Mir8090-201ENSMUST00000185078 136 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Gm44922-201ENSMUST00000206690 90 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Gm45489-201ENSMUST00000211753 443 ntTSL 3 BASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 AC149294.9-201ENSMUST00000227256 164 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Mir151-201ENSMUST00000083678 68 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Snora69-201ENSMUST00000083708 131 ntBASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Vmn1r185-210ENSMUST00000228367 6982 ntAPPRIS P1 BASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Olfr394-202ENSMUST00000214284 5562 ntAPPRIS P1 TSL 5 BASIC1.94□□□□□ -2.1
Cthrc1Q9D1D6 Gm23951-201ENSMUST00000104029 132 ntBASIC1.93□□□□□ -2.1
Cthrc1Q9D1D6 Gm24907-201ENSMUST00000116932 128 ntBASIC1.93□□□□□ -2.1
Cthrc1Q9D1D6 n-R5s187-201ENSMUST00000122769 111 ntBASIC1.93□□□□□ -2.1
Cthrc1Q9D1D6 Gm22557-201ENSMUST00000157804 102 ntBASIC1.93□□□□□ -2.1
Cthrc1Q9D1D6 Gm26097-201ENSMUST00000179642 93 ntBASIC1.93□□□□□ -2.1
Retrieved 100 of 76,532 protein–RNA pairs in 181.5 ms