Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Gm22004-201ENSMUST00000101884 107 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Mir344c-201ENSMUST00000103919 92 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm23128-201ENSMUST00000104257 132 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm25753-201ENSMUST00000116792 121 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm22490-201ENSMUST00000157188 119 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm24842-201ENSMUST00000158681 54 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm23128-202ENSMUST00000196578 133 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm44256-201ENSMUST00000203304 335 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm44966-201ENSMUST00000208096 157 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm18346-201ENSMUST00000216782 325 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 AC160962.3-201ENSMUST00000225914 112 ntBASIC2.72□□□□□ -1.97
RpainQ9CWY9 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
RpainQ9CWY9 Gm45178-201ENSMUST00000207744 4110 ntBASIC2.71□□□□□ -1.97
RpainQ9CWY9 Gm22678-201ENSMUST00000116974 101 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm24443-201ENSMUST00000157242 132 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm22558-201ENSMUST00000157326 95 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm20613-201ENSMUST00000175828 345 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm32250-201ENSMUST00000191885 322 ntTSL 3 BASIC2.71□□□□□ -1.98
RpainQ9CWY9 AC125167.1-201ENSMUST00000198698 141 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Mir3069-201ENSMUST00000198802 65 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm43264-201ENSMUST00000202284 325 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm44459-201ENSMUST00000203926 160 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm44932-201ENSMUST00000206799 121 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 CT033781.2-201ENSMUST00000221113 153 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm23040-201ENSMUST00000083869 163 ntBASIC2.71□□□□□ -1.98
RpainQ9CWY9 Olfr830-202ENSMUST00000212723 3105 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
RpainQ9CWY9 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Ifi203-202ENSMUST00000081216 3610 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm26247-201ENSMUST00000116702 91 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm14843-201ENSMUST00000119596 212 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm23324-201ENSMUST00000157421 131 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm24877-201ENSMUST00000158779 116 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm24082-201ENSMUST00000175175 83 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Mir669j-201ENSMUST00000179023 121 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm26435-201ENSMUST00000179026 107 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Mir7039-201ENSMUST00000183852 85 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm44358-201ENSMUST00000196301 98 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm43626-201ENSMUST00000198575 162 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Mir9-1-201ENSMUST00000199907 89 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm34276-201ENSMUST00000222558 439 ntTSL 5 BASIC2.7□□□□□ -1.98
RpainQ9CWY9 AC115291.1-201ENSMUST00000226803 258 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.7□□□□□ -1.98
RpainQ9CWY9 n-R5s176-201ENSMUST00000082683 109 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Mir369-201ENSMUST00000083627 79 ntBASIC2.7□□□□□ -1.98
RpainQ9CWY9 Olfr1454-202ENSMUST00000213806 3906 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RpainQ9CWY9 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RpainQ9CWY9 Vmn1r28-202ENSMUST00000227805 10892 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
RpainQ9CWY9 Olfr1448-202ENSMUST00000213177 3979 ntAPPRIS P1 TSL 5 BASIC2.7□□□□□ -1.98
RpainQ9CWY9 Vmn1r75-206ENSMUST00000228463 6508 ntAPPRIS P2 BASIC2.7□□□□□ -1.98
RpainQ9CWY9 Gm13200-201ENSMUST00000138802 258 ntTSL 3 BASIC2.69□□□□□ -1.98
RpainQ9CWY9 Gm25828-201ENSMUST00000157087 95 ntBASIC2.69□□□□□ -1.98
RpainQ9CWY9 Gm22429-201ENSMUST00000158553 130 ntBASIC2.69□□□□□ -1.98
RpainQ9CWY9 Gm22947-201ENSMUST00000158559 91 ntBASIC2.69□□□□□ -1.98
RpainQ9CWY9 Mir6402-201ENSMUST00000183406 80 ntBASIC2.69□□□□□ -1.98
RpainQ9CWY9 Mir7242-201ENSMUST00000183710 79 ntBASIC2.69□□□□□ -1.98
RpainQ9CWY9 Gm27379-201ENSMUST00000183730 123 ntBASIC2.69□□□□□ -1.98
RpainQ9CWY9 CAAA01090905.1-201ENSMUST00000219056 426 ntTSL 2 BASIC2.69□□□□□ -1.98
RpainQ9CWY9 AC154552.7-201ENSMUST00000222824 156 ntBASIC2.69□□□□□ -1.98
RpainQ9CWY9 AC125374.3-201ENSMUST00000214983 2810 ntBASIC2.69□□□□□ -1.98
RpainQ9CWY9 Olfr1153-202ENSMUST00000217436 2144 ntAPPRIS P1 TSL 5 BASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm22935-201ENSMUST00000103960 104 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm22674-201ENSMUST00000104413 131 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Snord100-201ENSMUST00000116836 74 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm14602-201ENSMUST00000118625 340 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm25153-201ENSMUST00000157118 156 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm24358-201ENSMUST00000158424 288 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm22011-201ENSMUST00000158790 123 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm22708-201ENSMUST00000158987 103 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm6788-201ENSMUST00000166459 270 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm33051-201ENSMUST00000192940 274 ntTSL 5 BASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm43722-201ENSMUST00000196054 124 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm43381-201ENSMUST00000198553 165 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 AC155839.1-201ENSMUST00000200105 147 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm45452-201ENSMUST00000210905 177 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 AC117198.1-201ENSMUST00000217080 651 ntTSL 5 BASIC2.68□□□□□ -1.98
RpainQ9CWY9 CT033785.1-201ENSMUST00000224872 272 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm24977-201ENSMUST00000083106 163 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm44177-201ENSMUST00000204338 2667 ntBASIC2.68□□□□□ -1.98
RpainQ9CWY9 Gm42785-201ENSMUST00000202316 3835 ntBASIC2.67□□□□□ -1.98
RpainQ9CWY9 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.67□□□□□ -1.98
RpainQ9CWY9 Gm25323-201ENSMUST00000122555 103 ntBASIC2.67□□□□□ -1.98
RpainQ9CWY9 Mir3103-201ENSMUST00000175474 67 ntBASIC2.67□□□□□ -1.98
RpainQ9CWY9 Gm21798-201ENSMUST00000180105 261 ntAPPRIS P1 TSL 5 BASIC2.67□□□□□ -1.98
RpainQ9CWY9 Gm43324-201ENSMUST00000197482 289 ntBASIC2.67□□□□□ -1.98
RpainQ9CWY9 Mir7118-201ENSMUST00000197760 61 ntBASIC2.67□□□□□ -1.98
RpainQ9CWY9 Gm22972-201ENSMUST00000083297 131 ntBASIC2.67□□□□□ -1.98
RpainQ9CWY9 Olfr498-201ENSMUST00000217616 2260 ntAPPRIS P1 BASIC2.67□□□□□ -1.98
RpainQ9CWY9 Olfr420-202ENSMUST00000213748 3806 ntAPPRIS P1 TSL 5 BASIC2.66□□□□□ -1.98
RpainQ9CWY9 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.66□□□□□ -1.98
RpainQ9CWY9 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.66□□□□□ -1.98
RpainQ9CWY9 Mir466k-201ENSMUST00000116774 122 ntBASIC2.66□□□□□ -1.98
RpainQ9CWY9 Gm24681-201ENSMUST00000158760 107 ntBASIC2.66□□□□□ -1.98
RpainQ9CWY9 Gm25364-201ENSMUST00000158851 107 ntBASIC2.66□□□□□ -1.98
RpainQ9CWY9 Gm25933-201ENSMUST00000178943 108 ntBASIC2.66□□□□□ -1.98
RpainQ9CWY9 Gm44478-201ENSMUST00000204875 114 ntBASIC2.66□□□□□ -1.98
RpainQ9CWY9 Gm22055-201ENSMUST00000083388 107 ntBASIC2.66□□□□□ -1.98
RpainQ9CWY9 Gm45257-201ENSMUST00000210301 3998 ntBASIC2.66□□□□□ -1.98
RpainQ9CWY9 Olfr868-202ENSMUST00000212999 4233 ntAPPRIS P1 TSL 3 BASIC2.65□□□□□ -1.98
RpainQ9CWY9 Olfr1161-203ENSMUST00000217006 3647 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.98
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms