Protein–RNA interactions for Protein: Q9CWT6

Ddx28, Probable ATP-dependent RNA helicase DDX28, mousemouse

Known RBP Predictions only

Length 540 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx28Q9CWT6 Gm6025-201ENSMUST00000121517 201 ntBASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Gm24394-201ENSMUST00000158141 123 ntBASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Snora15-201ENSMUST00000177461 131 ntBASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Mir3569-201ENSMUST00000185080 58 ntBASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.53□□□□□ -2.16
Ddx28Q9CWT6 Gm23011-201ENSMUST00000104148 132 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Gm23841-201ENSMUST00000116951 114 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Gm12686-201ENSMUST00000120546 397 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Gm2962-201ENSMUST00000159266 336 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Gm24366-201ENSMUST00000175383 86 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 4930598A11Rik-201ENSMUST00000180742 628 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Gm34139-201ENSMUST00000196166 294 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Gm44408-201ENSMUST00000200205 66 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 CT954323.1-201ENSMUST00000222774 229 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Gm24453-201ENSMUST00000083346 76 ntBASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Olfr1431-202ENSMUST00000213759 3001 ntAPPRIS P1 TSL 5 BASIC1.52□□□□□ -2.17
Ddx28Q9CWT6 Gm25279-201ENSMUST00000122608 133 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm23466-201ENSMUST00000157133 106 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm25884-201ENSMUST00000157782 62 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm22258-201ENSMUST00000177645 94 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm26032-201ENSMUST00000178535 94 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm25210-201ENSMUST00000178813 94 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm25157-201ENSMUST00000178914 94 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm22046-201ENSMUST00000179027 94 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm22941-201ENSMUST00000179630 94 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm25471-201ENSMUST00000180126 94 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Mir8090-201ENSMUST00000185078 136 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm44962-201ENSMUST00000206460 279 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 AC126691.1-201ENSMUST00000226534 202 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Mir221-201ENSMUST00000083488 95 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Gm24261-201ENSMUST00000083744 104 ntBASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Ddx28Q9CWT6 mt-Nd5-201ENSMUST00000082418 1824 ntAPPRIS P1 BASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm16032-201ENSMUST00000118534 168 ntBASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm24594-201ENSMUST00000122502 99 ntBASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm25424-201ENSMUST00000157612 58 ntBASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm22553-201ENSMUST00000157797 295 ntBASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm27248-201ENSMUST00000184004 166 ntBASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm29603-201ENSMUST00000186792 334 ntBASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm44325-201ENSMUST00000196757 77 ntBASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm10719-202ENSMUST00000099049 675 ntAPPRIS ALT2 TSL 5 BASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm37602-201ENSMUST00000195187 3310 ntBASIC1.5□□□□□ -2.17
Ddx28Q9CWT6 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.49□□□□□ -2.17
Ddx28Q9CWT6 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.49□□□□□ -2.17
Ddx28Q9CWT6 Gm23047-201ENSMUST00000177661 94 ntBASIC1.49□□□□□ -2.17
Ddx28Q9CWT6 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.49□□□□□ -2.17
Ddx28Q9CWT6 Mir541-201ENSMUST00000102097 90 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm23230-201ENSMUST00000157298 133 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Mir1967-201ENSMUST00000157789 82 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm26482-201ENSMUST00000158015 62 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm23892-201ENSMUST00000158105 130 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm25749-201ENSMUST00000175485 111 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm20630-201ENSMUST00000177387 551 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm29613-201ENSMUST00000185846 313 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm28376-201ENSMUST00000186604 176 ntTSL 5 BASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm29544-201ENSMUST00000188860 313 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm28808-201ENSMUST00000190978 313 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm44384-201ENSMUST00000200208 114 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 AC124182.1-201ENSMUST00000227091 321 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm25142-201ENSMUST00000082698 107 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm24406-201ENSMUST00000083026 128 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Olfr1218-202ENSMUST00000213609 3760 ntAPPRIS P1 TSL 5 BASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm33962-201ENSMUST00000182643 2592 ntBASIC1.48□□□□□ -2.17
Ddx28Q9CWT6 Gm24121-201ENSMUST00000102029 106 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm13797-201ENSMUST00000121792 120 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm26181-201ENSMUST00000157687 106 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm25935-201ENSMUST00000178746 107 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Mir7225-201ENSMUST00000184178 54 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm28383-201ENSMUST00000187563 139 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm29262-201ENSMUST00000190084 196 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm37715-201ENSMUST00000193206 235 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 AC164612.2-202ENSMUST00000216314 253 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Mucl1-202ENSMUST00000226484 758 ntAPPRIS P5 BASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm25634-201ENSMUST00000082667 105 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.47□□□□□ -2.17
Ddx28Q9CWT6 Gm24895-201ENSMUST00000122742 74 ntBASIC1.46□□□□□ -2.18
Ddx28Q9CWT6 Gm25720-201ENSMUST00000157503 105 ntBASIC1.46□□□□□ -2.18
Ddx28Q9CWT6 Gm25423-201ENSMUST00000157609 107 ntBASIC1.46□□□□□ -2.18
Ddx28Q9CWT6 Gm22433-201ENSMUST00000158550 142 ntBASIC1.46□□□□□ -2.18
Ddx28Q9CWT6 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Ddx28Q9CWT6 AC117232.1-201ENSMUST00000197964 119 ntBASIC1.46□□□□□ -2.18
Ddx28Q9CWT6 Gm45116-201ENSMUST00000207392 275 ntBASIC1.46□□□□□ -2.18
Ddx28Q9CWT6 AC154390.1-201ENSMUST00000225629 277 ntBASIC1.46□□□□□ -2.18
Ddx28Q9CWT6 Olfr1225-203ENSMUST00000217054 5517 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm22761-201ENSMUST00000102278 96 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm14536-201ENSMUST00000118324 138 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm15027-201ENSMUST00000120922 138 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm12815-201ENSMUST00000121737 135 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm22145-201ENSMUST00000157396 148 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Snord13-201ENSMUST00000157627 104 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm28020-201ENSMUST00000157739 67 ntBASIC1.45□□□□□ -2.18
Ddx28Q9CWT6 Gm22099-201ENSMUST00000157925 123 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 135.9 ms