Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm21258-201ENSMUST00000178673 567 ntTSL 5 BASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Gm21650-201ENSMUST00000179073 567 ntTSL 5 BASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Gm20937-201ENSMUST00000180329 567 ntTSL 5 BASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Gm28881-201ENSMUST00000187710 470 ntTSL 3 BASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Olfr1401-ps1-201ENSMUST00000202296 211 ntBASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Gm44419-201ENSMUST00000203338 229 ntBASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 AC109212.1-201ENSMUST00000215561 427 ntBASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Gm25855-201ENSMUST00000082787 72 ntBASIC0.58□□□□□ -2.32
RTRAFQ9CQE8 Gm24375-201ENSMUST00000104397 132 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Gm22814-201ENSMUST00000157452 104 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Gm23536-201ENSMUST00000157541 134 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Gm28794-201ENSMUST00000185276 136 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Mir465d-201ENSMUST00000196314 58 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Mir468-201ENSMUST00000197332 78 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 CT485607.2-201ENSMUST00000214650 91 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 CT009713.9-201ENSMUST00000223604 389 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 AC164297.5-201ENSMUST00000224365 198 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 AC115735.2-201ENSMUST00000227135 351 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Snord42a-201ENSMUST00000082606 65 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Mir27b-201ENSMUST00000083541 73 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Mir34a-201ENSMUST00000083559 102 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Gm26111-201ENSMUST00000083969 106 ntBASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Olfr867-203ENSMUST00000216538 4617 ntAPPRIS P1 TSL 5 BASIC0.57□□□□□ -2.32
RTRAFQ9CQE8 Gm14568-201ENSMUST00000119321 294 ntBASIC0.56□□□□□ -2.32
RTRAFQ9CQE8 Gm24847-201ENSMUST00000158032 108 ntBASIC0.56□□□□□ -2.32
RTRAFQ9CQE8 Gm25166-201ENSMUST00000158909 111 ntBASIC0.56□□□□□ -2.32
RTRAFQ9CQE8 Vmn2r-ps65-201ENSMUST00000173309 220 ntBASIC0.56□□□□□ -2.32
RTRAFQ9CQE8 Gm29490-201ENSMUST00000190923 342 ntBASIC0.56□□□□□ -2.32
RTRAFQ9CQE8 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.56□□□□□ -2.32
RTRAFQ9CQE8 Snord32a-201ENSMUST00000083285 83 ntBASIC0.56□□□□□ -2.32
RTRAFQ9CQE8 Gm26338-201ENSMUST00000102372 110 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Gm22021-201ENSMUST00000104353 107 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Gm23101-201ENSMUST00000157550 137 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Gm27365-201ENSMUST00000184041 177 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Gm37338-201ENSMUST00000191986 127 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Gm42988-201ENSMUST00000198116 225 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Mir6962-201ENSMUST00000199512 63 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Gm26495-201ENSMUST00000083152 137 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Mir181a-1-201ENSMUST00000083631 87 ntBASIC0.55□□□□□ -2.32
RTRAFQ9CQE8 Mir654-201ENSMUST00000104787 84 ntBASIC0.54□□□□□ -2.32
RTRAFQ9CQE8 Gm25783-201ENSMUST00000122525 190 ntBASIC0.54□□□□□ -2.32
RTRAFQ9CQE8 Gm22228-201ENSMUST00000157364 101 ntBASIC0.54□□□□□ -2.32
RTRAFQ9CQE8 Mir3535-201ENSMUST00000197651 147 ntBASIC0.54□□□□□ -2.32
RTRAFQ9CQE8 Gm40331-201ENSMUST00000198430 217 ntTSL 3 BASIC0.54□□□□□ -2.32
RTRAFQ9CQE8 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC0.54□□□□□ -2.32
RTRAFQ9CQE8 Gm30155-201ENSMUST00000223458 339 ntBASIC0.54□□□□□ -2.32
RTRAFQ9CQE8 Gm22704-201ENSMUST00000083027 137 ntBASIC0.54□□□□□ -2.32
RTRAFQ9CQE8 Gm24271-201ENSMUST00000102327 111 ntBASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 1700120G11Rik-201ENSMUST00000150273 491 ntTSL 1 (best) BASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Gm24747-201ENSMUST00000157835 87 ntBASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Vmn1r-ps23-201ENSMUST00000175708 295 ntBASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Gm42533-201ENSMUST00000196247 157 ntBASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Gm44320-201ENSMUST00000199276 86 ntBASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Nbdy-205ENSMUST00000208235 132 ntAPPRIS P2 TSL 2 BASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 AC132615.1-201ENSMUST00000213873 255 ntBASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Gm22809-201ENSMUST00000082743 156 ntBASIC0.53□□□□□ -2.32
RTRAFQ9CQE8 Arhgap5-204ENSMUST00000219443 9323 ntAPPRIS P1 TSL 5 BASIC0.53□□□□□ -2.33
RTRAFQ9CQE8 Gm25485-201ENSMUST00000104120 132 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm26255-201ENSMUST00000122492 103 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm23640-201ENSMUST00000157860 104 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm23665-201ENSMUST00000158054 62 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm24942-201ENSMUST00000158328 114 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Mir1931-201ENSMUST00000158589 119 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm22664-201ENSMUST00000158719 105 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm24737-201ENSMUST00000158861 100 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Trav5d-3-201ENSMUST00000170041 270 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm45738-201ENSMUST00000203645 233 ntTSL 5 BASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm44921-201ENSMUST00000205290 301 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 AC164117.2-201ENSMUST00000222090 327 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Mir216a-201ENSMUST00000083605 72 ntBASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC0.52□□□□□ -2.33
RTRAFQ9CQE8 Mir880-201ENSMUST00000104809 78 ntBASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 n-R5s73-201ENSMUST00000122508 107 ntBASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 Bsph2-ps-201ENSMUST00000183795 241 ntBASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 Gm28256-201ENSMUST00000188953 139 ntBASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 Gm28559-201ENSMUST00000190532 139 ntBASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 Gm37763-201ENSMUST00000193445 120 ntBASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 Gm23242-201ENSMUST00000083055 107 ntBASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 n-R5s183-201ENSMUST00000083939 115 ntBASIC0.51□□□□□ -2.33
RTRAFQ9CQE8 Gm13711-201ENSMUST00000119708 453 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Gm23584-201ENSMUST00000157655 129 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Gm25949-201ENSMUST00000175333 114 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Gm43563-201ENSMUST00000196761 198 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Gm44976-201ENSMUST00000205543 261 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 AC154994.1-201ENSMUST00000217395 302 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 CT010454.1-201ENSMUST00000225975 265 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 CT010505.1-201ENSMUST00000227026 396 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Gm24316-201ENSMUST00000083041 107 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Mir362-201ENSMUST00000093592 65 ntBASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Olfr618-202ENSMUST00000214883 3304 ntAPPRIS P1 TSL 5 BASIC0.5□□□□□ -2.33
RTRAFQ9CQE8 Gm10730-201ENSMUST00000194097 2723 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Traj13-201ENSMUST00000103728 57 ntAPPRIS P1 BASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm15030-201ENSMUST00000119804 484 ntBASIC0.49□□□□□ -2.33
RTRAFQ9CQE8 Gm23982-201ENSMUST00000157141 106 ntBASIC0.49□□□□□ -2.33
Retrieved 100 of 76,532 protein–RNA pairs in 11.3 ms