Protein–RNA interactions for Protein: Q91Y21

Pcdha1, Protocadherin alpha 1, mousemouse

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha1Q91Y21 Olfr339-202ENSMUST00000216645 4867 ntAPPRIS P1 TSL 3 BASIC2.59□□□□□ -1.99
Pcdha1Q91Y21 Gm26342-201ENSMUST00000104557 129 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Snord100-201ENSMUST00000116836 74 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 n-R5s15-201ENSMUST00000122635 111 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Gm25980-201ENSMUST00000157176 218 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Gm23113-201ENSMUST00000158477 99 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Gm22416-201ENSMUST00000158590 88 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Gm25119-201ENSMUST00000158815 88 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Gm25707-201ENSMUST00000175120 96 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Gm37545-201ENSMUST00000186512 148 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Mir3969-201ENSMUST00000197106 92 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Trav14-1-201ENSMUST00000198297 399 ntAPPRIS P1 BASIC2.58□□□□□ -2
Pcdha1Q91Y21 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Gm23249-201ENSMUST00000083369 161 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 Gm45461-201ENSMUST00000211726 4535 ntBASIC2.58□□□□□ -2
Pcdha1Q91Y21 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gm22752-201ENSMUST00000102083 109 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gm24232-201ENSMUST00000104314 132 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Snord90-201ENSMUST00000104568 111 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gm24586-201ENSMUST00000116695 89 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gm24141-201ENSMUST00000122776 115 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gm23854-201ENSMUST00000158378 108 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gm22738-201ENSMUST00000083440 147 ntBASIC2.57□□□□□ -2
Pcdha1Q91Y21 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.57□□□□□ -2
Pcdha1Q91Y21 Olfr1370-204ENSMUST00000215806 4322 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
Pcdha1Q91Y21 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC2.56□□□□□ -2
Pcdha1Q91Y21 Gm13756-201ENSMUST00000117618 222 ntBASIC2.56□□□□□ -2
Pcdha1Q91Y21 Gm25882-201ENSMUST00000157784 85 ntBASIC2.56□□□□□ -2
Pcdha1Q91Y21 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.56□□□□□ -2
Pcdha1Q91Y21 Gm44680-201ENSMUST00000208414 2910 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Igkv4-63-201ENSMUST00000103351 286 ntAPPRIS P1 BASIC2.55□□□□□ -2
Pcdha1Q91Y21 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.55□□□□□ -2
Pcdha1Q91Y21 Snora36b-201ENSMUST00000104383 132 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Gm26473-201ENSMUST00000116763 127 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Gm23390-201ENSMUST00000157393 106 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Gm23223-201ENSMUST00000158119 127 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Gm27672-201ENSMUST00000183751 204 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Gm29613-201ENSMUST00000185846 313 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Gm29544-201ENSMUST00000188860 313 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Gm28808-201ENSMUST00000190978 313 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Igkv13-54-1-201ENSMUST00000196495 303 ntBASIC2.55□□□□□ -2
Pcdha1Q91Y21 Olfr1309-205ENSMUST00000216948 5168 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
Pcdha1Q91Y21 Gm37928-201ENSMUST00000193265 4131 ntBASIC2.54□□□□□ -2
Pcdha1Q91Y21 Gm25945-201ENSMUST00000122484 135 ntBASIC2.54□□□□□ -2
Pcdha1Q91Y21 Gm25866-201ENSMUST00000158245 112 ntBASIC2.54□□□□□ -2
Pcdha1Q91Y21 Gm27934-201ENSMUST00000158795 63 ntBASIC2.54□□□□□ -2
Pcdha1Q91Y21 Gm27369-201ENSMUST00000185182 71 ntBASIC2.54□□□□□ -2
Pcdha1Q91Y21 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.54□□□□□ -2
Pcdha1Q91Y21 Olfr1442-204ENSMUST00000208657 3148 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
Pcdha1Q91Y21 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.53□□□□□ -2
Pcdha1Q91Y21 Mir542-201ENSMUST00000102186 85 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm26339-201ENSMUST00000102368 99 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm22105-201ENSMUST00000116734 116 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm14567-201ENSMUST00000117155 174 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm24212-201ENSMUST00000158258 132 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm22946-201ENSMUST00000158558 82 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm24333-201ENSMUST00000175101 84 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm7214-201ENSMUST00000222428 272 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 AC129085.1-201ENSMUST00000225263 165 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Gm24461-201ENSMUST00000082735 103 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 Mir429-201ENSMUST00000083493 83 ntBASIC2.53□□□□□ -2
Pcdha1Q91Y21 F8-202ENSMUST00000114085 7295 ntAPPRIS ALT2 TSL 1 (best) BASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm13246-201ENSMUST00000120994 315 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm23260-201ENSMUST00000158317 172 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm25642-201ENSMUST00000175137 66 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm22775-201ENSMUST00000177630 120 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm23569-201ENSMUST00000180120 120 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Trav6-3-202ENSMUST00000183604 305 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm44976-201ENSMUST00000205543 261 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 mt-Ta-201ENSMUST00000082398 69 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm22306-201ENSMUST00000082692 107 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm25357-201ENSMUST00000082745 72 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Gm24038-201ENSMUST00000082872 159 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Snord61-201ENSMUST00000083176 71 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Mir201-201ENSMUST00000083470 66 ntBASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Tlr3-201ENSMUST00000034056 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC2.52□□□□□ -2.01
Pcdha1Q91Y21 Olfr509-202ENSMUST00000213756 3547 ntAPPRIS P1 TSL 5 BASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm13757-202ENSMUST00000179450 4383 ntAPPRIS P1 TSL 2 BASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm25485-201ENSMUST00000104120 132 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm15069-201ENSMUST00000117792 192 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm15068-201ENSMUST00000119796 192 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm25884-201ENSMUST00000157782 62 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm42719-201ENSMUST00000197393 355 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Mir6925-201ENSMUST00000197857 70 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Mir378a-201ENSMUST00000198300 66 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm45492-201ENSMUST00000211611 288 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm8031-201ENSMUST00000213430 626 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm23138-201ENSMUST00000083365 103 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm24698-201ENSMUST00000083883 130 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm25627-201ENSMUST00000084003 153 ntBASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 C230088H06Rik-202ENSMUST00000181752 3010 ntTSL 5 BASIC2.51□□□□□ -2.01
Pcdha1Q91Y21 Gm11334-201ENSMUST00000121969 156 ntBASIC2.5□□□□□ -2.01
Pcdha1Q91Y21 Gm22966-201ENSMUST00000157957 129 ntBASIC2.5□□□□□ -2.01
Pcdha1Q91Y21 Gm24771-201ENSMUST00000158508 137 ntBASIC2.5□□□□□ -2.01
Pcdha1Q91Y21 Gm3852-201ENSMUST00000182781 264 ntBASIC2.5□□□□□ -2.01
Retrieved 100 of 76,532 protein–RNA pairs in 134.2 ms