Protein–RNA interactions for Protein: Q91XZ9

Pcdhb20, Protocadherin beta 20, mousemouse

Predictions only

Length 799 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb20Q91XZ9 Gm42684-201ENSMUST00000197663 3615 ntBASIC3.62□□□□□ -1.83
Pcdhb20Q91XZ9 Csnka2ip-202ENSMUST00000209382 2859 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Gm37928-201ENSMUST00000193265 4131 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Gm26080-201ENSMUST00000104069 131 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Mir880-201ENSMUST00000104809 78 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 n-R5s68-201ENSMUST00000122639 82 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 8030453O22Rik-201ENSMUST00000128919 370 ntTSL 3 BASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Gm23753-201ENSMUST00000157575 149 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Gm24505-201ENSMUST00000157682 126 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Gm26460-201ENSMUST00000175061 126 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Gm24656-201ENSMUST00000177548 132 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Gm42935-201ENSMUST00000202004 151 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 AC100590.2-201ENSMUST00000219028 215 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 n-R5s220-201ENSMUST00000082926 120 ntBASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Olfr479-202ENSMUST00000209805 2902 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Obscn-203ENSMUST00000052872 23006 ntTSL 5 BASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Olfr1116-202ENSMUST00000216364 9655 ntAPPRIS ALT2 TSL 5 BASIC3.61□□□□□ -1.83
Pcdhb20Q91XZ9 Cd209e-201ENSMUST00000033888 1802 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Zfp518a-201ENSMUST00000050092 6840 ntAPPRIS P1 TSL 2 BASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Gm14636-202ENSMUST00000150801 5060 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Gm11704-201ENSMUST00000120031 214 ntBASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Gm22768-201ENSMUST00000158366 153 ntBASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Mir3070b-201ENSMUST00000175205 89 ntBASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Gm27639-201ENSMUST00000184937 85 ntBASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Olfr1245-202ENSMUST00000217402 2610 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Gm42770-201ENSMUST00000199657 4155 ntBASIC3.6□□□□□ -1.83
Pcdhb20Q91XZ9 Catsperb-201ENSMUST00000055156 3716 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdhb20Q91XZ9 Dock11-203ENSMUST00000115266 6047 ntTSL 5 BASIC3.59□□□□□ -1.83
Pcdhb20Q91XZ9 Gm8244-201ENSMUST00000121254 264 ntBASIC3.59□□□□□ -1.83
Pcdhb20Q91XZ9 Gm24668-201ENSMUST00000158935 104 ntBASIC3.59□□□□□ -1.83
Pcdhb20Q91XZ9 Gm34779-201ENSMUST00000210036 263 ntBASIC3.59□□□□□ -1.83
Pcdhb20Q91XZ9 Mir26a-1-201ENSMUST00000083579 90 ntBASIC3.59□□□□□ -1.83
Pcdhb20Q91XZ9 Mir1a-1-201ENSMUST00000093635 77 ntBASIC3.59□□□□□ -1.83
Pcdhb20Q91XZ9 Cbll1-204ENSMUST00000185739 3945 ntAPPRIS ALT1 TSL 1 (best) BASIC3.59□□□□□ -1.83
Pcdhb20Q91XZ9 Macf1-206ENSMUST00000106224 23402 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Gm25611-201ENSMUST00000104017 133 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Defa-ps9-201ENSMUST00000118264 276 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Gm25105-201ENSMUST00000122477 130 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Gm23084-201ENSMUST00000157850 114 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Snora26-201ENSMUST00000175614 121 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Mir6237-201ENSMUST00000183808 91 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Gm27773-201ENSMUST00000184087 78 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 AC134577.1-201ENSMUST00000227572 295 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Gm25644-201ENSMUST00000083209 107 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Mir451a-201ENSMUST00000093557 72 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 AC126033.1-201ENSMUST00000227628 6773 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 AC153948.1-201ENSMUST00000219080 3838 ntBASIC3.58□□□□□ -1.84
Pcdhb20Q91XZ9 Vmn1r51-207ENSMUST00000227766 4218 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
Pcdhb20Q91XZ9 Gm26369-201ENSMUST00000157825 100 ntBASIC3.57□□□□□ -1.84
Pcdhb20Q91XZ9 Gm22522-201ENSMUST00000158271 151 ntBASIC3.57□□□□□ -1.84
Pcdhb20Q91XZ9 Gm27392-201ENSMUST00000185041 101 ntBASIC3.57□□□□□ -1.84
Pcdhb20Q91XZ9 Gm4036-201ENSMUST00000220842 626 ntBASIC3.57□□□□□ -1.84
Pcdhb20Q91XZ9 Gm25205-201ENSMUST00000082841 103 ntBASIC3.57□□□□□ -1.84
Pcdhb20Q91XZ9 Mir323-201ENSMUST00000083683 86 ntBASIC3.57□□□□□ -1.84
Pcdhb20Q91XZ9 Gm44150-201ENSMUST00000203317 2619 ntBASIC3.57□□□□□ -1.84
Pcdhb20Q91XZ9 Gm38162-201ENSMUST00000195562 4597 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Lyst-201ENSMUST00000110559 13181 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Olfr1184-202ENSMUST00000216675 3164 ntAPPRIS P1 TSL 5 BASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Zfp600-204ENSMUST00000168483 4244 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 n-R5s219-201ENSMUST00000104328 132 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Gm16021-201ENSMUST00000121176 219 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Gm24244-201ENSMUST00000157317 130 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Gm26004-201ENSMUST00000158804 116 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Gm23860-201ENSMUST00000179446 132 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Mir6385-201ENSMUST00000184295 105 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Gm37698-201ENSMUST00000192605 463 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Mir7215-201ENSMUST00000200383 51 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 AC138401.2-201ENSMUST00000220461 365 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 AC159093.2-201ENSMUST00000227881 297 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Mir30c-2-201ENSMUST00000083633 84 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Snord15a-201ENSMUST00000083888 148 ntBASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Hif1a-202ENSMUST00000110461 4385 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Slco6c1-201ENSMUST00000027569 2747 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
Pcdhb20Q91XZ9 Csmd3-204ENSMUST00000160658 12460 ntTSL 5 BASIC3.55□□□□□ -1.84
Pcdhb20Q91XZ9 Mecom-203ENSMUST00000108271 3851 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhb20Q91XZ9 Gm8260-201ENSMUST00000119230 353 ntBASIC3.55□□□□□ -1.84
Pcdhb20Q91XZ9 Gm15799-201ENSMUST00000120899 289 ntBASIC3.55□□□□□ -1.84
Pcdhb20Q91XZ9 Gm6788-201ENSMUST00000166459 270 ntBASIC3.55□□□□□ -1.84
Pcdhb20Q91XZ9 Gm20693-201ENSMUST00000177431 211 ntBASIC3.55□□□□□ -1.84
Pcdhb20Q91XZ9 Gm25354-201ENSMUST00000179110 105 ntBASIC3.55□□□□□ -1.84
Pcdhb20Q91XZ9 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
Pcdhb20Q91XZ9 Olfr166-203ENSMUST00000216465 4371 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Olfr124-204ENSMUST00000217365 4365 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Olfr235-205ENSMUST00000214638 3459 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Gm14843-201ENSMUST00000119596 212 ntBASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Defa-ps5-201ENSMUST00000121541 279 ntBASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Gm24771-201ENSMUST00000158508 137 ntBASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Gm27975-201ENSMUST00000184400 101 ntBASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Gm4788-201ENSMUST00000027612 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Gm26123-201ENSMUST00000083363 135 ntBASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Gm23249-201ENSMUST00000083369 161 ntBASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Olfr791-202ENSMUST00000217228 2502 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Vmn1r185-213ENSMUST00000228676 5199 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Gm42585-201ENSMUST00000198731 4020 ntBASIC3.54□□□□□ -1.84
Pcdhb20Q91XZ9 Xiap-201ENSMUST00000026978 6834 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
Pcdhb20Q91XZ9 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
Retrieved 100 of 76,532 protein–RNA pairs in 140.4 ms