Protein–RNA interactions for Protein: Q8VI40

Trim60, Tripartite motif-containing protein 60, mousemouse

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim60Q8VI40 AC098718.1-201ENSMUST00000226166 175 ntBASIC1.56□□□□□ -2.16
Trim60Q8VI40 Mir148b-201ENSMUST00000083626 97 ntBASIC1.56□□□□□ -2.16
Trim60Q8VI40 Gm22279-201ENSMUST00000157200 93 ntBASIC1.55□□□□□ -2.16
Trim60Q8VI40 Gm24006-201ENSMUST00000158462 132 ntBASIC1.55□□□□□ -2.16
Trim60Q8VI40 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
Trim60Q8VI40 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.55□□□□□ -2.16
Trim60Q8VI40 Mir181b-2-201ENSMUST00000083644 89 ntBASIC1.55□□□□□ -2.16
Trim60Q8VI40 Gm24261-201ENSMUST00000083744 104 ntBASIC1.55□□□□□ -2.16
Trim60Q8VI40 Gm44240-201ENSMUST00000204015 2654 ntBASIC1.55□□□□□ -2.16
Trim60Q8VI40 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.55□□□□□ -2.16
Trim60Q8VI40 Traj37-201ENSMUST00000103705 60 ntAPPRIS P1 BASIC1.54□□□□□ -2.16
Trim60Q8VI40 Gm12797-201ENSMUST00000118645 273 ntBASIC1.54□□□□□ -2.16
Trim60Q8VI40 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.54□□□□□ -2.16
Trim60Q8VI40 Gm25423-201ENSMUST00000157609 107 ntBASIC1.54□□□□□ -2.16
Trim60Q8VI40 Gm23221-201ENSMUST00000158118 93 ntBASIC1.54□□□□□ -2.16
Trim60Q8VI40 Vmn2r-ps20-201ENSMUST00000179853 382 ntBASIC1.54□□□□□ -2.16
Trim60Q8VI40 Gm44308-201ENSMUST00000197080 99 ntBASIC1.54□□□□□ -2.16
Trim60Q8VI40 Eif4e-206ENSMUST00000200239 526 ntTSL 5 BASIC1.54□□□□□ -2.16
Trim60Q8VI40 Gm6105-201ENSMUST00000200580 624 ntBASIC1.54□□□□□ -2.16
Trim60Q8VI40 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.54□□□□□ -2.16
Trim60Q8VI40 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Trim60Q8VI40 Gm11936-201ENSMUST00000118323 160 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 Gm15115-201ENSMUST00000121145 264 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 Gm24595-201ENSMUST00000122501 110 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 Gm24895-201ENSMUST00000122742 74 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 Gm22551-201ENSMUST00000157795 103 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 Mir6336-201ENSMUST00000183581 130 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 8030445P17Rik-201ENSMUST00000192614 2741 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 Gm42719-201ENSMUST00000197393 355 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 AC165157.3-201ENSMUST00000220815 103 ntBASIC1.53□□□□□ -2.16
Trim60Q8VI40 Gm6377-201ENSMUST00000060013 2793 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
Trim60Q8VI40 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
Trim60Q8VI40 Gm42862-201ENSMUST00000197494 2621 ntBASIC1.52□□□□□ -2.17
Trim60Q8VI40 Gm23208-201ENSMUST00000158666 127 ntBASIC1.52□□□□□ -2.17
Trim60Q8VI40 Gm29613-201ENSMUST00000185846 313 ntBASIC1.52□□□□□ -2.17
Trim60Q8VI40 Gm29544-201ENSMUST00000188860 313 ntBASIC1.52□□□□□ -2.17
Trim60Q8VI40 Gm28808-201ENSMUST00000190978 313 ntBASIC1.52□□□□□ -2.17
Trim60Q8VI40 AL606472.1-201ENSMUST00000224628 275 ntBASIC1.52□□□□□ -2.17
Trim60Q8VI40 Gm15214-201ENSMUST00000122155 470 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Gm24594-201ENSMUST00000122502 99 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Gm25825-201ENSMUST00000157091 124 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Gm24366-201ENSMUST00000175383 86 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Gm22951-201ENSMUST00000179471 107 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Gm18433-201ENSMUST00000192747 197 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Gm44409-201ENSMUST00000198810 166 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Snora19-201ENSMUST00000082962 132 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Gm23658-201ENSMUST00000083233 132 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Mir410-201ENSMUST00000083563 81 ntBASIC1.51□□□□□ -2.17
Trim60Q8VI40 Gm14882-201ENSMUST00000117216 218 ntBASIC1.5□□□□□ -2.17
Trim60Q8VI40 Gm15379-201ENSMUST00000121224 648 ntBASIC1.5□□□□□ -2.17
Trim60Q8VI40 Gm28724-201ENSMUST00000186149 625 ntBASIC1.5□□□□□ -2.17
Trim60Q8VI40 Gm29603-201ENSMUST00000186792 334 ntBASIC1.5□□□□□ -2.17
Trim60Q8VI40 Gm43563-201ENSMUST00000196761 198 ntBASIC1.5□□□□□ -2.17
Trim60Q8VI40 CU062626.2-201ENSMUST00000223953 274 ntBASIC1.5□□□□□ -2.17
Trim60Q8VI40 Zfp960-201ENSMUST00000127027 2667 ntAPPRIS P1 TSL 1 (best) BASIC1.49□□□□□ -2.17
Trim60Q8VI40 Gm26080-201ENSMUST00000104069 131 ntBASIC1.49□□□□□ -2.17
Trim60Q8VI40 Gm13560-201ENSMUST00000121865 329 ntBASIC1.49□□□□□ -2.17
Trim60Q8VI40 Gm25718-201ENSMUST00000158632 118 ntBASIC1.49□□□□□ -2.17
Trim60Q8VI40 AC147560.1-201ENSMUST00000197528 107 ntBASIC1.49□□□□□ -2.17
Trim60Q8VI40 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.49□□□□□ -2.17
Trim60Q8VI40 AC154994.1-201ENSMUST00000217395 302 ntBASIC1.49□□□□□ -2.17
Trim60Q8VI40 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trim60Q8VI40 Olfr790-202ENSMUST00000203966 2602 ntAPPRIS P1 TSL 5 BASIC1.49□□□□□ -2.17
Trim60Q8VI40 Gm26339-201ENSMUST00000102368 99 ntBASIC1.48□□□□□ -2.17
Trim60Q8VI40 Gm25653-201ENSMUST00000158473 138 ntBASIC1.48□□□□□ -2.17
Trim60Q8VI40 Gm44563-201ENSMUST00000207958 178 ntBASIC1.48□□□□□ -2.17
Trim60Q8VI40 Mir320-201ENSMUST00000083594 82 ntBASIC1.48□□□□□ -2.17
Trim60Q8VI40 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.48□□□□□ -2.17
Trim60Q8VI40 Gm25992-201ENSMUST00000102437 109 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 Gm14917-201ENSMUST00000118872 2105 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 Gm15391-201ENSMUST00000147509 257 ntTSL 3 BASIC1.47□□□□□ -2.17
Trim60Q8VI40 Gm25424-201ENSMUST00000157612 58 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 Gm22862-201ENSMUST00000178593 121 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 Gm23002-201ENSMUST00000179221 107 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 Gm29022-201ENSMUST00000190702 225 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 AL928567.1-201ENSMUST00000197891 138 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 mt-Td-201ENSMUST00000082404 70 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 Mir92-2-201ENSMUST00000083679 91 ntBASIC1.47□□□□□ -2.17
Trim60Q8VI40 Gm23907-201ENSMUST00000104595 189 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Mir881-201ENSMUST00000104844 78 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm26156-201ENSMUST00000116999 123 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm16032-201ENSMUST00000118534 168 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm13801-201ENSMUST00000120750 160 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm11204-201ENSMUST00000122438 147 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm23558-201ENSMUST00000157823 80 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm23267-201ENSMUST00000178490 132 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm28794-201ENSMUST00000185276 136 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm44989-201ENSMUST00000204749 217 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.46□□□□□ -2.18
Trim60Q8VI40 AC125020.2-201ENSMUST00000218894 348 ntBASIC1.46□□□□□ -2.18
Trim60Q8VI40 Vmn1r75-207ENSMUST00000228646 4466 ntAPPRIS ALT2 BASIC1.46□□□□□ -2.18
Trim60Q8VI40 Olfr935-202ENSMUST00000214157 1693 ntAPPRIS P1 TSL 3 BASIC1.45□□□□□ -2.18
Trim60Q8VI40 Gm25759-201ENSMUST00000103988 129 ntBASIC1.45□□□□□ -2.18
Trim60Q8VI40 Mir669g-201ENSMUST00000116809 123 ntBASIC1.45□□□□□ -2.18
Trim60Q8VI40 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.45□□□□□ -2.18
Trim60Q8VI40 Gm22553-201ENSMUST00000157797 295 ntBASIC1.45□□□□□ -2.18
Trim60Q8VI40 Gm24902-201ENSMUST00000158126 123 ntBASIC1.45□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 134.7 ms