Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm22727-201ENSMUST00000158090 116 ntBASIC2.36□□□□□ -2.03
Brf1Q8CFK2 Gtpbp4-ps1-201ENSMUST00000184732 249 ntBASIC2.36□□□□□ -2.03
Brf1Q8CFK2 N4bp2os-201ENSMUST00000201547 235 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
Brf1Q8CFK2 AC163289.1-201ENSMUST00000215919 262 ntBASIC2.36□□□□□ -2.03
Brf1Q8CFK2 AC192091.2-201ENSMUST00000217869 117 ntBASIC2.36□□□□□ -2.03
Brf1Q8CFK2 AC168056.1-201ENSMUST00000225270 180 ntBASIC2.36□□□□□ -2.03
Brf1Q8CFK2 Gm26077-201ENSMUST00000104064 123 ntBASIC2.35□□□□□ -2.03
Brf1Q8CFK2 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
Brf1Q8CFK2 Gm44922-201ENSMUST00000206690 90 ntBASIC2.35□□□□□ -2.03
Brf1Q8CFK2 Gm45791-201ENSMUST00000212908 352 ntBASIC2.35□□□□□ -2.03
Brf1Q8CFK2 AC165138.1-201ENSMUST00000226984 270 ntBASIC2.35□□□□□ -2.03
Brf1Q8CFK2 Mir186-201ENSMUST00000083497 71 ntBASIC2.35□□□□□ -2.03
Brf1Q8CFK2 Ifi203-209ENSMUST00000156895 3605 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
Brf1Q8CFK2 AL645643.1-201ENSMUST00000222438 3897 ntBASIC2.35□□□□□ -2.03
Brf1Q8CFK2 Olfr868-201ENSMUST00000212767 4196 ntAPPRIS P1 TSL 3 BASIC2.35□□□□□ -2.03
Brf1Q8CFK2 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm14536-201ENSMUST00000118324 138 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm6952-201ENSMUST00000118629 159 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm15027-201ENSMUST00000120922 138 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm25428-201ENSMUST00000157608 114 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm22557-201ENSMUST00000157804 102 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm29604-201ENSMUST00000187176 163 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm21064-202ENSMUST00000190583 278 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm37693-201ENSMUST00000194562 234 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm3724-201ENSMUST00000197957 349 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Mir322-201ENSMUST00000083484 95 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 Gm22866-201ENSMUST00000083947 177 ntBASIC2.34□□□□□ -2.03
Brf1Q8CFK2 AC159625.1-201ENSMUST00000220994 2625 ntBASIC2.34□□□□□ -2.04
Brf1Q8CFK2 Gpr174-202ENSMUST00000117310 3536 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm11060-201ENSMUST00000111107 72 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm22279-201ENSMUST00000157200 93 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm22554-201ENSMUST00000157798 147 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm26160-201ENSMUST00000158965 63 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm25464-201ENSMUST00000175481 107 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm22264-201ENSMUST00000178200 107 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm26097-201ENSMUST00000179642 93 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm43749-201ENSMUST00000199345 352 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm44938-201ENSMUST00000208614 427 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 AC144671.1-201ENSMUST00000215265 99 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 AC159885.1-201ENSMUST00000222221 199 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 AC127371.3-201ENSMUST00000228129 415 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm25788-201ENSMUST00000082721 131 ntBASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Olfr1291-ps1-201ENSMUST00000121345 5403 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
Brf1Q8CFK2 Gm37895-201ENSMUST00000192448 4550 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm3081-201ENSMUST00000193413 3025 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm26293-201ENSMUST00000104170 84 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm23390-201ENSMUST00000157393 106 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm22606-201ENSMUST00000158290 103 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm22768-201ENSMUST00000158366 153 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm25716-201ENSMUST00000158628 104 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm17364-201ENSMUST00000163881 72 ntAPPRIS P1 TSL 5 BASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm37557-201ENSMUST00000191640 139 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Ighv1-1-201ENSMUST00000194912 291 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm44326-201ENSMUST00000198226 101 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Ptp4a1-206ENSMUST00000202889 135 ntTSL 2 BASIC2.32□□□□□ -2.04
Brf1Q8CFK2 AC134601.1-201ENSMUST00000221058 109 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 AC149294.9-201ENSMUST00000227256 164 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm25081-201ENSMUST00000082534 108 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Mir300-201ENSMUST00000083485 79 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Mir423-201ENSMUST00000083584 109 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Mir218-1-201ENSMUST00000083669 110 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Olfr1442-203ENSMUST00000208494 3593 ntAPPRIS P1 TSL 3 BASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Olfr974-202ENSMUST00000213246 3561 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Snhg14-213ENSMUST00000190666 3708 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Gm43877-201ENSMUST00000205029 2238 ntBASIC2.32□□□□□ -2.04
Brf1Q8CFK2 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC2.31□□□□□ -2.04
Brf1Q8CFK2 Gpr174-207ENSMUST00000178838 4955 ntAPPRIS P1 TSL 2 BASIC2.31□□□□□ -2.04
Brf1Q8CFK2 Vmn1r-ps120-201ENSMUST00000120288 377 ntBASIC2.31□□□□□ -2.04
Brf1Q8CFK2 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC2.31□□□□□ -2.04
Brf1Q8CFK2 Gm24044-201ENSMUST00000083107 156 ntBASIC2.31□□□□□ -2.04
Brf1Q8CFK2 Mir93-201ENSMUST00000083593 88 ntBASIC2.31□□□□□ -2.04
Brf1Q8CFK2 Usp9y-201ENSMUST00000091188 8094 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Gm26154-201ENSMUST00000102339 96 ntBASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Trdj2-201ENSMUST00000103683 59 ntAPPRIS P1 BASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Gm22148-201ENSMUST00000104445 107 ntBASIC2.3□□□□□ -2.04
Brf1Q8CFK2 n-R5s159-201ENSMUST00000122681 120 ntBASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Mir6997-201ENSMUST00000184313 71 ntBASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Mir6388-201ENSMUST00000184417 75 ntBASIC2.3□□□□□ -2.04
Brf1Q8CFK2 1700014F14Rik-201ENSMUST00000199566 197 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Gm44057-201ENSMUST00000204547 96 ntBASIC2.3□□□□□ -2.04
Brf1Q8CFK2 AC133517.1-203ENSMUST00000225570 390 ntBASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Zfp966-201ENSMUST00000108949 2939 ntAPPRIS P1 TSL 3 BASIC2.3□□□□□ -2.04
Brf1Q8CFK2 Zfp616-205ENSMUST00000178159 2964 ntAPPRIS P1 BASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Knl1-202ENSMUST00000028802 7800 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Olfr851-202ENSMUST00000214130 7123 ntAPPRIS P1 TSL 5 BASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Gm26018-201ENSMUST00000104406 128 ntBASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Gm13345-201ENSMUST00000121928 228 ntBASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Gm22477-201ENSMUST00000122569 316 ntBASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Gm22011-201ENSMUST00000158790 123 ntBASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Gm29308-201ENSMUST00000188863 315 ntBASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Hmgb1l-201ENSMUST00000082150 571 ntBASIC2.29□□□□□ -2.04
Brf1Q8CFK2 AC153966.1-201ENSMUST00000220106 3764 ntBASIC2.29□□□□□ -2.04
Brf1Q8CFK2 Mir1966-201ENSMUST00000158807 108 ntBASIC2.28□□□□□ -2.04
Brf1Q8CFK2 Trav7-6-202ENSMUST00000184687 275 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
Brf1Q8CFK2 Gm27544-201ENSMUST00000185069 155 ntBASIC2.28□□□□□ -2.04
Brf1Q8CFK2 Gm28076-201ENSMUST00000188337 410 ntTSL 3 BASIC2.28□□□□□ -2.04
Brf1Q8CFK2 Gm44578-201ENSMUST00000207236 3835 ntBASIC2.28□□□□□ -2.04
Brf1Q8CFK2 AC134601.3-201ENSMUST00000221682 154 ntBASIC2.28□□□□□ -2.04
Brf1Q8CFK2 AC158982.2-201ENSMUST00000226283 184 ntBASIC2.28□□□□□ -2.04
Retrieved 100 of 76,532 protein–RNA pairs in 153.4 ms