Protein–RNA interactions for Protein: Q8CEI3

Ccdc28a, Coiled-coil domain-containing 28A, mousemouse

Predictions only

Length 192 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28aQ8CEI3 Mir1951-201ENSMUST00000157981 89 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22163-201ENSMUST00000158408 135 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25901-201ENSMUST00000158494 130 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22888-201ENSMUST00000158640 77 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm26400-201ENSMUST00000175012 85 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm23921-201ENSMUST00000175258 107 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm27656-201ENSMUST00000185055 80 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Mir468-201ENSMUST00000197332 78 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Mir376a-201ENSMUST00000197584 68 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm43472-201ENSMUST00000200175 154 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm43884-201ENSMUST00000204251 559 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 4930598N05Rik-207ENSMUST00000208997 83 ntTSL 5 BASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Olfr1070-ps1-201ENSMUST00000215939 388 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25078-201ENSMUST00000082530 107 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm26107-201ENSMUST00000083972 107 ntBASIC0.4□□□□□ -2.35
Ccdc28aQ8CEI3 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22598-201ENSMUST00000157600 127 ntBASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm26358-201ENSMUST00000158215 97 ntBASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm26727-201ENSMUST00000180773 366 ntAPPRIS P1 BASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm29276-201ENSMUST00000190453 932 ntAPPRIS P1 TSL 1 (best) BASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm38050-201ENSMUST00000191904 238 ntBASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm36946-201ENSMUST00000192706 435 ntBASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 AC110380.1-201ENSMUST00000226987 389 ntBASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25204-201ENSMUST00000082843 106 ntBASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22294-201ENSMUST00000083308 104 ntBASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC0.39□□□□□ -2.35
Ccdc28aQ8CEI3 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Mir669p-2-201ENSMUST00000103868 87 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Mir669p-1-201ENSMUST00000103884 87 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm24116-201ENSMUST00000103975 107 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25378-201ENSMUST00000104333 129 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Mir654-201ENSMUST00000104787 84 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm14536-201ENSMUST00000118324 138 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm13518-201ENSMUST00000120018 233 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm12748-201ENSMUST00000120763 504 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm15027-201ENSMUST00000120922 138 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm13560-201ENSMUST00000121865 329 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25783-201ENSMUST00000122525 190 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm23605-201ENSMUST00000157255 127 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25671-201ENSMUST00000178612 105 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm23307-201ENSMUST00000179167 105 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25286-201ENSMUST00000179790 105 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm43406-201ENSMUST00000200356 334 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Klk1b28-ps-201ENSMUST00000206374 217 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Olfr1478-ps1-201ENSMUST00000208393 391 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Olfr865-ps1-201ENSMUST00000212071 85 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 AC147101.2-201ENSMUST00000219756 184 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 AC167192.1-201ENSMUST00000225908 139 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22809-201ENSMUST00000082743 156 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm24920-201ENSMUST00000083018 85 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm24164-201ENSMUST00000093663 104 ntBASIC0.38□□□□□ -2.35
Ccdc28aQ8CEI3 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22883-201ENSMUST00000157376 106 ntBASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22945-201ENSMUST00000158557 157 ntBASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 4930555M17Rik-201ENSMUST00000176666 402 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25450-201ENSMUST00000179144 107 ntBASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 Gm6105-201ENSMUST00000200580 624 ntBASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 Gm44734-201ENSMUST00000206025 237 ntTSL 5 BASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 AC108945.1-201ENSMUST00000226477 94 ntBASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 AC124182.1-201ENSMUST00000227091 321 ntBASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 Mir34a-201ENSMUST00000083559 102 ntBASIC0.37□□□□□ -2.35
Ccdc28aQ8CEI3 Gm24595-201ENSMUST00000122501 110 ntBASIC0.36□□□□□ -2.35
Ccdc28aQ8CEI3 Mir1931-201ENSMUST00000158589 119 ntBASIC0.36□□□□□ -2.35
Ccdc28aQ8CEI3 Ranbp2-ps5-201ENSMUST00000185141 379 ntBASIC0.36□□□□□ -2.35
Ccdc28aQ8CEI3 Gm20923-201ENSMUST00000190009 319 ntBASIC0.36□□□□□ -2.35
Ccdc28aQ8CEI3 Gm21088-201ENSMUST00000190875 316 ntBASIC0.36□□□□□ -2.35
Ccdc28aQ8CEI3 Gm44063-201ENSMUST00000203307 376 ntBASIC0.36□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22248-201ENSMUST00000082482 150 ntBASIC0.36□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25855-201ENSMUST00000082787 72 ntBASIC0.36□□□□□ -2.35
Ccdc28aQ8CEI3 Snord71-201ENSMUST00000104361 85 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm23492-201ENSMUST00000116837 115 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm12785-201ENSMUST00000122052 172 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 n-R5s70-201ENSMUST00000122650 116 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25968-201ENSMUST00000157167 100 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm23672-201ENSMUST00000157471 107 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm23113-201ENSMUST00000158477 99 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25949-201ENSMUST00000175333 114 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm44387-201ENSMUST00000196298 145 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm43238-201ENSMUST00000196463 359 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm42622-201ENSMUST00000197229 355 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm42988-201ENSMUST00000198116 225 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm44462-201ENSMUST00000199696 129 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 AC116589.4-201ENSMUST00000222390 216 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 AC098718.2-201ENSMUST00000226822 285 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Gm25929-201ENSMUST00000082784 107 ntBASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC0.35□□□□□ -2.35
Ccdc28aQ8CEI3 Olfr867-202ENSMUST00000212098 4228 ntTSL 3 BASIC0.34□□□□□ -2.35
Ccdc28aQ8CEI3 Gm22759-201ENSMUST00000102276 96 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Mir880-201ENSMUST00000104809 78 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Scgb1b24-201ENSMUST00000108087 279 ntAPPRIS P1 TSL 1 (best) BASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Gm14761-201ENSMUST00000121363 262 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Mir1961-201ENSMUST00000158643 112 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Gm23340-201ENSMUST00000158955 123 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Gm28330-201ENSMUST00000190353 171 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Gm44352-201ENSMUST00000196358 110 ntBASIC0.34□□□□□ -2.36
Ccdc28aQ8CEI3 Gm43624-201ENSMUST00000197368 180 ntBASIC0.34□□□□□ -2.36
Retrieved 100 of 76,532 protein–RNA pairs in 135.2 ms