Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm24624-201ENSMUST00000082617 164 ntBASIC1.22□□□□□ -2.21
Ccdc60Q8C4J0 Gm23245-201ENSMUST00000083370 135 ntBASIC1.22□□□□□ -2.21
Ccdc60Q8C4J0 Gm23039-201ENSMUST00000083870 161 ntBASIC1.22□□□□□ -2.21
Ccdc60Q8C4J0 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.22□□□□□ -2.21
Ccdc60Q8C4J0 Rpl30-ps5-201ENSMUST00000117104 361 ntBASIC1.21□□□□□ -2.22
Ccdc60Q8C4J0 Gm23982-201ENSMUST00000157141 106 ntBASIC1.21□□□□□ -2.22
Ccdc60Q8C4J0 Gm24915-201ENSMUST00000157288 78 ntBASIC1.21□□□□□ -2.22
Ccdc60Q8C4J0 Gm23640-201ENSMUST00000157860 104 ntBASIC1.21□□□□□ -2.22
Ccdc60Q8C4J0 Mir1951-201ENSMUST00000157981 89 ntBASIC1.21□□□□□ -2.22
Ccdc60Q8C4J0 Mir7663-201ENSMUST00000183950 61 ntBASIC1.21□□□□□ -2.22
Ccdc60Q8C4J0 Hspe1-ps2-201ENSMUST00000051437 312 ntBASIC1.21□□□□□ -2.22
Ccdc60Q8C4J0 Gm23406-201ENSMUST00000082537 122 ntBASIC1.21□□□□□ -2.22
Ccdc60Q8C4J0 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Mir669i-201ENSMUST00000117007 127 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm15213-201ENSMUST00000122098 216 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm15214-201ENSMUST00000122155 470 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm22984-201ENSMUST00000122751 122 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm25715-201ENSMUST00000158627 125 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Mir7052-201ENSMUST00000184821 65 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm28409-201ENSMUST00000187064 103 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm44325-201ENSMUST00000196757 77 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm43602-201ENSMUST00000196772 300 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm44028-201ENSMUST00000205205 355 ntTSL 5 BASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm45005-201ENSMUST00000206640 157 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 Gm45673-201ENSMUST00000210293 358 ntBASIC1.2□□□□□ -2.22
Ccdc60Q8C4J0 BC022960-201ENSMUST00000119987 1815 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm18795-202ENSMUST00000223373 2920 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Olfr921-202ENSMUST00000213958 4012 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm44177-201ENSMUST00000204338 2667 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm23328-201ENSMUST00000157418 132 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm23339-201ENSMUST00000158962 139 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Olfr1366-201ENSMUST00000168629 1054 ntAPPRIS ALT2 BASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm44352-201ENSMUST00000196358 110 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm42594-201ENSMUST00000199511 246 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm6105-201ENSMUST00000200580 624 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 AC132615.1-201ENSMUST00000213873 255 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Olfr1366-204ENSMUST00000218154 1054 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 CT025689.3-201ENSMUST00000223817 301 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm22248-201ENSMUST00000082482 150 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm25204-201ENSMUST00000082843 106 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm24042-201ENSMUST00000083114 103 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Gm24261-201ENSMUST00000083744 104 ntBASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Vmn1r75-202ENSMUST00000226622 6638 ntAPPRIS P2 BASIC1.19□□□□□ -2.22
Ccdc60Q8C4J0 Olfr820-203ENSMUST00000215791 3956 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm12080-201ENSMUST00000119821 1883 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Mir544-201ENSMUST00000103813 78 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm10945-201ENSMUST00000105596 60 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Rhox11-ps3-201ENSMUST00000121166 233 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm13560-201ENSMUST00000121865 329 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm26479-201ENSMUST00000122620 106 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm15327-202ENSMUST00000153958 467 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm22216-201ENSMUST00000157557 114 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm25884-201ENSMUST00000157782 62 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm23277-201ENSMUST00000157914 136 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Mir3968-201ENSMUST00000175355 100 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm25615-201ENSMUST00000177836 94 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Mir6380-201ENSMUST00000184334 81 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm19777-201ENSMUST00000191940 358 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm34139-201ENSMUST00000196166 294 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm22306-201ENSMUST00000082692 107 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm24316-201ENSMUST00000083041 107 ntBASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm10509-201ENSMUST00000097384 259 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
Ccdc60Q8C4J0 Gm23766-201ENSMUST00000103894 80 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm23987-201ENSMUST00000117039 129 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm14919-201ENSMUST00000120839 390 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm23214-201ENSMUST00000122716 157 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm25825-201ENSMUST00000157091 124 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm23536-201ENSMUST00000157541 134 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm22164-201ENSMUST00000158413 106 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm26741-201ENSMUST00000180473 87 ntAPPRIS P1 BASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 AC157476.1-201ENSMUST00000215555 169 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Snord96a-201ENSMUST00000082791 81 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm25038-201ENSMUST00000082928 130 ntBASIC1.17□□□□□ -2.22
Ccdc60Q8C4J0 Gm23941-201ENSMUST00000101953 107 ntBASIC1.16□□□□□ -2.22
Ccdc60Q8C4J0 Gm22545-201ENSMUST00000104350 132 ntBASIC1.16□□□□□ -2.22
Ccdc60Q8C4J0 Zfp969-202ENSMUST00000131041 252 ntTSL 2 BASIC1.16□□□□□ -2.22
Ccdc60Q8C4J0 Gm26038-201ENSMUST00000158151 106 ntBASIC1.16□□□□□ -2.22
Ccdc60Q8C4J0 Gm44373-201ENSMUST00000196112 169 ntBASIC1.16□□□□□ -2.22
Ccdc60Q8C4J0 Gm42855-201ENSMUST00000197388 253 ntBASIC1.16□□□□□ -2.22
Ccdc60Q8C4J0 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.16□□□□□ -2.22
Ccdc60Q8C4J0 Gm45313-201ENSMUST00000210584 178 ntBASIC1.16□□□□□ -2.22
Ccdc60Q8C4J0 Olfr136-205ENSMUST00000216963 1821 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.22
Ccdc60Q8C4J0 n-R5s188-201ENSMUST00000122646 105 ntBASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Gm10722-201ENSMUST00000151376 651 ntAPPRIS P1 TSL 5 BASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Gm22321-201ENSMUST00000157152 104 ntBASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Mir3061-201ENSMUST00000175129 91 ntBASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Gm16399-201ENSMUST00000181423 219 ntBASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Mir8116-201ENSMUST00000184134 97 ntBASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Gm45027-201ENSMUST00000207081 78 ntTSL 3 BASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Gm22571-201ENSMUST00000082984 70 ntBASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Mir27b-201ENSMUST00000083541 73 ntBASIC1.15□□□□□ -2.23
Ccdc60Q8C4J0 Gm15404-201ENSMUST00000141811 364 ntTSL 2 BASIC1.14□□□□□ -2.23
Ccdc60Q8C4J0 Gm23665-201ENSMUST00000158054 62 ntBASIC1.14□□□□□ -2.23
Ccdc60Q8C4J0 Gm23419-201ENSMUST00000175523 84 ntBASIC1.14□□□□□ -2.23
Ccdc60Q8C4J0 Gm21903-201ENSMUST00000178039 90 ntAPPRIS P1 TSL 5 BASIC1.14□□□□□ -2.23
Ccdc60Q8C4J0 Mir7091-201ENSMUST00000184075 79 ntBASIC1.14□□□□□ -2.23
Ccdc60Q8C4J0 Gm27587-201ENSMUST00000185116 163 ntBASIC1.14□□□□□ -2.23
Ccdc60Q8C4J0 AC116460.1-201ENSMUST00000219040 313 ntBASIC1.14□□□□□ -2.23
Ccdc60Q8C4J0 Gm18188-201ENSMUST00000219386 478 ntBASIC1.14□□□□□ -2.23
Retrieved 100 of 76,532 protein–RNA pairs in 131.7 ms