Protein–RNA interactions for Protein: Q80YF6

Upk3b, Uroplakin-3b, mousemouse

Predictions only

Length 275 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bQ80YF6 Gm21064-202ENSMUST00000190583 278 ntBASIC1.46□□□□□ -2.18
Upk3bQ80YF6 Gm45456-201ENSMUST00000210841 243 ntBASIC1.46□□□□□ -2.18
Upk3bQ80YF6 AC164561.1-201ENSMUST00000220414 115 ntBASIC1.46□□□□□ -2.18
Upk3bQ80YF6 AC120540.2-201ENSMUST00000221716 387 ntBASIC1.46□□□□□ -2.18
Upk3bQ80YF6 Mir302d-201ENSMUST00000083513 66 ntBASIC1.46□□□□□ -2.18
Upk3bQ80YF6 Gm10217-201ENSMUST00000088080 135 ntAPPRIS P1 TSL 5 BASIC1.46□□□□□ -2.18
Upk3bQ80YF6 Vmn1r75-203ENSMUST00000226855 6548 ntAPPRIS P2 BASIC1.46□□□□□ -2.18
Upk3bQ80YF6 Gm43877-201ENSMUST00000205029 2238 ntBASIC1.46□□□□□ -2.18
Upk3bQ80YF6 Gm14914-201ENSMUST00000117576 2031 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Vmn1r78-203ENSMUST00000228664 8100 ntAPPRIS P1 BASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Olfr948-202ENSMUST00000216132 4164 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm26339-201ENSMUST00000102368 99 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm23655-201ENSMUST00000122627 105 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm12801-201ENSMUST00000153228 263 ntTSL 3 BASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm26049-201ENSMUST00000157313 108 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm23854-201ENSMUST00000158378 108 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm16162-201ENSMUST00000162296 297 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm25464-201ENSMUST00000175481 107 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Mir6350-201ENSMUST00000183639 105 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm5010-201ENSMUST00000213131 260 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 AC126672.1-201ENSMUST00000217096 396 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Mir107-201ENSMUST00000083660 87 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm25895-201ENSMUST00000083714 100 ntBASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm10234-201ENSMUST00000089304 60 ntAPPRIS P1 TSL 5 BASIC1.45□□□□□ -2.18
Upk3bQ80YF6 Gm26077-201ENSMUST00000104064 123 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm14536-201ENSMUST00000118324 138 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm15027-201ENSMUST00000120922 138 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm25985-201ENSMUST00000122677 107 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm22586-201ENSMUST00000157507 122 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm22553-201ENSMUST00000157797 295 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm25599-201ENSMUST00000157816 103 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm20477-201ENSMUST00000174028 280 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm24510-201ENSMUST00000174965 94 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm38183-201ENSMUST00000193189 205 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm44491-201ENSMUST00000196794 96 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm18213-201ENSMUST00000207850 178 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 AC122242.1-201ENSMUST00000224650 304 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 AC127371.3-201ENSMUST00000228129 415 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm24406-201ENSMUST00000083026 128 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm43706-201ENSMUST00000198767 2652 ntBASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Olfr307-202ENSMUST00000213705 4498 ntAPPRIS P1 TSL 5 BASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Gm13219-201ENSMUST00000144870 3019 ntTSL 1 (best) BASIC1.44□□□□□ -2.18
Upk3bQ80YF6 Mir374b-201ENSMUST00000102314 95 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Gm13560-201ENSMUST00000121865 329 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Gm27928-201ENSMUST00000183747 256 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Mir7047-201ENSMUST00000184595 64 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Gm37693-201ENSMUST00000194562 234 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Gm9251-201ENSMUST00000197202 628 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Gm43427-201ENSMUST00000198188 331 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Gm44326-201ENSMUST00000198226 101 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Snord80-202ENSMUST00000199023 77 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Gm45013-201ENSMUST00000206883 178 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 AC091764.1-201ENSMUST00000218029 132 ntTSL 5 BASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Gm25142-201ENSMUST00000082698 107 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Snora33-201ENSMUST00000093556 129 ntBASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.43□□□□□ -2.18
Upk3bQ80YF6 Olfr1450-202ENSMUST00000213587 2872 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Snord89-201ENSMUST00000104516 110 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Gm15861-201ENSMUST00000120979 339 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Gm12865-201ENSMUST00000137353 326 ntTSL 2 BASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Gm22699-201ENSMUST00000175376 105 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Mir9-3-201ENSMUST00000175497 90 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Rnu6-ps2-201ENSMUST00000178059 107 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Gm29347-201ENSMUST00000186695 449 ntTSL 3 BASIC1.42□□□□□ -2.18
Upk3bQ80YF6 AL772271.1-201ENSMUST00000196848 65 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Gm23370-201ENSMUST00000199545 130 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Mir721-201ENSMUST00000200230 88 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Gm5002-201ENSMUST00000207145 223 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 AC150901.1-201ENSMUST00000208407 145 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 CT025579.1-201ENSMUST00000223779 366 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 AC129202.1-201ENSMUST00000224895 526 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 AC168056.1-201ENSMUST00000225270 180 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Snord118-201ENSMUST00000082965 135 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Olfr1039-203ENSMUST00000216566 4166 ntAPPRIS P1 TSL 5 BASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Gm42635-201ENSMUST00000200266 2571 ntBASIC1.42□□□□□ -2.18
Upk3bQ80YF6 Gm23551-201ENSMUST00000116852 121 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Gm6025-201ENSMUST00000121517 201 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Gm23718-201ENSMUST00000157350 307 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Gm26150-201ENSMUST00000157426 151 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Gm25884-201ENSMUST00000157782 62 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Gm22606-201ENSMUST00000158290 103 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Gm25994-201ENSMUST00000175392 101 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Gm25935-201ENSMUST00000178746 107 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Mir6351-201ENSMUST00000183826 99 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Mir6993-201ENSMUST00000184912 65 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Gm42623-201ENSMUST00000197225 379 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Mir3961-201ENSMUST00000198795 59 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Snora3-201ENSMUST00000083082 132 ntBASIC1.41□□□□□ -2.18
Upk3bQ80YF6 Zfp788-207ENSMUST00000170770 2499 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Traj20-201ENSMUST00000103721 58 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Gm24375-201ENSMUST00000104397 132 ntBASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Gm22768-201ENSMUST00000158366 153 ntBASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Gm26403-201ENSMUST00000158500 105 ntBASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Gm17020-201ENSMUST00000172274 274 ntBASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Snord87-201ENSMUST00000175437 87 ntBASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Gm22510-201ENSMUST00000179304 79 ntBASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Gm26336-201ENSMUST00000179449 79 ntBASIC1.4□□□□□ -2.19
Upk3bQ80YF6 Gm26390-201ENSMUST00000179628 79 ntBASIC1.4□□□□□ -2.19
Retrieved 100 of 76,532 protein–RNA pairs in 199.7 ms