Protein–RNA interactions for Protein: Q6PAV2

Herc4, Probable E3 ubiquitin-protein ligase HERC4, mousemouse

Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc4Q6PAV2 Arhgap5-201ENSMUST00000110725 5197 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
Herc4Q6PAV2 Olfr1002-202ENSMUST00000215548 2295 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
Herc4Q6PAV2 Mir881-201ENSMUST00000104844 78 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm12797-201ENSMUST00000118645 273 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm16405-201ENSMUST00000169247 468 ntAPPRIS P1 TSL 3 BASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Obox4-ps37-201ENSMUST00000177223 276 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm7958-201ENSMUST00000178255 468 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm7950-201ENSMUST00000179633 468 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm28921-201ENSMUST00000190219 378 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 AC125167.1-201ENSMUST00000198698 141 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm5010-201ENSMUST00000213131 260 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 mt-Ti-201ENSMUST00000082393 69 ntBASIC1.53□□□□□ -2.16
Herc4Q6PAV2 Gm25541-201ENSMUST00000116888 126 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm26479-201ENSMUST00000122620 106 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm13569-201ENSMUST00000137221 574 ntTSL 3 BASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm23170-201ENSMUST00000157158 106 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm27579-201ENSMUST00000158113 63 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm24729-201ENSMUST00000158225 137 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Mir7665-201ENSMUST00000184907 63 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm37763-201ENSMUST00000193445 120 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 CT010454.1-201ENSMUST00000225975 265 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Gm9795-201ENSMUST00000062156 693 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Rny1-201ENSMUST00000083767 112 ntBASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Vmn1r75-204ENSMUST00000227611 4336 ntAPPRIS ALT2 BASIC1.52□□□□□ -2.17
Herc4Q6PAV2 Olfr141-201ENSMUST00000216117 2935 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25992-201ENSMUST00000102437 109 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm26082-201ENSMUST00000104070 127 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25875-201ENSMUST00000104323 107 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm23705-201ENSMUST00000104370 130 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25718-201ENSMUST00000158632 118 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm24229-201ENSMUST00000158830 118 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm24415-201ENSMUST00000180218 107 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm28453-203ENSMUST00000187041 189 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 1700010N08Rik-201ENSMUST00000187456 189 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 A730009L09Rik-202ENSMUST00000210306 201 ntAPPRIS ALT2 TSL 5 BASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25357-201ENSMUST00000082745 72 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25410-201ENSMUST00000083758 137 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 AC164297.1-201ENSMUST00000224484 1561 ntBASIC1.51□□□□□ -2.17
Herc4Q6PAV2 Gm25943-201ENSMUST00000103791 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466b-7-201ENSMUST00000103804 88 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466b-5-201ENSMUST00000103900 88 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Gm10563-201ENSMUST00000115821 237 ntAPPRIS P1 TSL 5 BASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466b-4-201ENSMUST00000178801 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Gm25285-201ENSMUST00000178951 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466b-6-201ENSMUST00000180061 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir466c-2-201ENSMUST00000180211 90 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Gm29308-201ENSMUST00000188863 315 ntBASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Tex15-201ENSMUST00000009772 8405 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
Herc4Q6PAV2 Mir653-201ENSMUST00000102402 85 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm12686-201ENSMUST00000120546 397 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm14922-201ENSMUST00000121131 163 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm16225-201ENSMUST00000146152 276 ntTSL 5 BASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm23982-201ENSMUST00000157141 106 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm26049-201ENSMUST00000157313 108 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm26287-201ENSMUST00000158887 81 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm22450-201ENSMUST00000179641 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm25473-201ENSMUST00000180191 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm27517-201ENSMUST00000184347 236 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm28537-201ENSMUST00000189026 315 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm29631-201ENSMUST00000191065 315 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Ighv12-2-201ENSMUST00000191949 362 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm36546-201ENSMUST00000206372 230 ntTSL 5 BASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Vmn2r-ps50-201ENSMUST00000209317 120 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm31447-201ENSMUST00000222345 384 ntTSL 3 BASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm10092-201ENSMUST00000077110 180 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Snord14a-201ENSMUST00000082807 87 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm24856-201ENSMUST00000082809 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm26495-201ENSMUST00000083152 137 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm26071-201ENSMUST00000083261 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm24521-201ENSMUST00000083958 107 ntBASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Vmn1r73-202ENSMUST00000226516 6155 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
Herc4Q6PAV2 Gm24423-201ENSMUST00000101982 106 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm22784-201ENSMUST00000104088 132 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm22433-201ENSMUST00000158550 142 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm24677-201ENSMUST00000158755 150 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm25615-201ENSMUST00000177836 94 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Mir6240-201ENSMUST00000184281 117 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm27545-201ENSMUST00000184755 202 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm29022-201ENSMUST00000190702 225 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Sprr2h-202ENSMUST00000191886 297 ntTSL 1 (best) BASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Vmn1r-ps6-202ENSMUST00000202526 135 ntTSL 5 BASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Gm24204-201ENSMUST00000082950 107 ntBASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Olfr188-ps1-201ENSMUST00000205766 4706 ntTSL 5 BASIC1.48□□□□□ -2.17
Herc4Q6PAV2 Olfr1098-202ENSMUST00000111574 2885 ntAPPRIS P1 TSL 3 BASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Olfr730-202ENSMUST00000205837 4903 ntAPPRIS ALT1 BASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm25565-201ENSMUST00000104605 105 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Fau-ps1-201ENSMUST00000119675 252 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm22883-201ENSMUST00000157376 106 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm24392-201ENSMUST00000158136 103 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm23208-201ENSMUST00000158666 127 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm24667-201ENSMUST00000158938 103 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm21905-201ENSMUST00000177616 87 ntAPPRIS P1 TSL 5 BASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm25936-201ENSMUST00000179952 114 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Mir8119-201ENSMUST00000183371 129 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Mir6540-201ENSMUST00000184886 108 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm38064-201ENSMUST00000194032 444 ntTSL 3 BASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm19855-201ENSMUST00000210145 249 ntBASIC1.47□□□□□ -2.17
Herc4Q6PAV2 Gm22673-201ENSMUST00000104415 131 ntBASIC1.46□□□□□ -2.18
Herc4Q6PAV2 Gm12309-201ENSMUST00000119889 182 ntBASIC1.46□□□□□ -2.18
Herc4Q6PAV2 Gm14846-201ENSMUST00000121868 216 ntBASIC1.46□□□□□ -2.18
Retrieved 100 of 76,532 protein–RNA pairs in 196.2 ms