Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 1700016B01Rik-201ENSMUST00000197688 270 ntTSL 1 (best) BASIC2.96□□□□□ -1.94
Sh3rf1Q69ZI1 Gm43901-201ENSMUST00000203247 453 ntBASIC2.96□□□□□ -1.94
Sh3rf1Q69ZI1 AC130477.2-201ENSMUST00000228158 274 ntBASIC2.96□□□□□ -1.94
Sh3rf1Q69ZI1 Gm25130-201ENSMUST00000082650 156 ntBASIC2.96□□□□□ -1.94
Sh3rf1Q69ZI1 Gm26175-201ENSMUST00000083794 131 ntBASIC2.96□□□□□ -1.94
Sh3rf1Q69ZI1 Gm18795-201ENSMUST00000222371 3266 ntTSL 5 BASIC2.96□□□□□ -1.94
Sh3rf1Q69ZI1 Ighv9-3-201ENSMUST00000103473 351 ntAPPRIS P1 BASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm14946-201ENSMUST00000119859 296 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm25825-201ENSMUST00000157091 124 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm22079-201ENSMUST00000157592 106 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm26215-201ENSMUST00000158584 139 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm22858-201ENSMUST00000174972 76 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Mir6916-201ENSMUST00000184514 63 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm29602-201ENSMUST00000186887 442 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm24350-202ENSMUST00000198309 132 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm44223-201ENSMUST00000204854 114 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Gm44399-201ENSMUST00000205043 226 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 1700010L04Rik-201ENSMUST00000032872 330 ntTSL 5 BASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 AC122850.1-201ENSMUST00000220380 5690 ntBASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Olfr1256-203ENSMUST00000213833 6081 ntAPPRIS P1 TSL 3 BASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Tlr3-202ENSMUST00000167106 4093 ntAPPRIS P1 TSL 1 (best) BASIC2.95□□□□□ -1.94
Sh3rf1Q69ZI1 Olfr789-202ENSMUST00000213992 4421 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Sh3rf1Q69ZI1 Olfr839-ps1-201ENSMUST00000212127 7759 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Sh3rf1Q69ZI1 Gm22228-201ENSMUST00000157364 101 ntBASIC2.94□□□□□ -1.94
Sh3rf1Q69ZI1 Mir9-2-201ENSMUST00000083490 72 ntBASIC2.94□□□□□ -1.94
Sh3rf1Q69ZI1 Gm43032-201ENSMUST00000197967 3123 ntBASIC2.94□□□□□ -1.94
Sh3rf1Q69ZI1 Olfr1186-202ENSMUST00000215912 1850 ntAPPRIS P1 TSL 5 BASIC2.94□□□□□ -1.94
Sh3rf1Q69ZI1 Gm24468-201ENSMUST00000104489 104 ntBASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Gm23654-201ENSMUST00000116758 126 ntBASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Gm24736-201ENSMUST00000158862 130 ntBASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Snhg14-203ENSMUST00000185815 670 ntTSL 5 BASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Gm24474-201ENSMUST00000220504 469 ntTSL 2 BASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Gm31025-201ENSMUST00000222553 482 ntTSL 5 BASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Gm25513-201ENSMUST00000083861 162 ntBASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 AC154386.1-201ENSMUST00000222753 2871 ntBASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Olfr58-202ENSMUST00000215112 2454 ntAPPRIS P1 TSL 2 BASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Gm13479-201ENSMUST00000130773 4722 ntTSL 1 (best) BASIC2.93□□□□□ -1.94
Sh3rf1Q69ZI1 Olfr1193-203ENSMUST00000216767 3690 ntAPPRIS P1 TSL 5 BASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm42801-201ENSMUST00000202562 2865 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm24375-201ENSMUST00000104397 132 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm15069-201ENSMUST00000117792 192 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm15068-201ENSMUST00000119796 192 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 2210417A02Rik-201ENSMUST00000150265 550 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm26099-201ENSMUST00000157248 109 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm26214-201ENSMUST00000158581 107 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm22853-201ENSMUST00000174974 131 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm27527-201ENSMUST00000183903 99 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 B230207O21Rik-201ENSMUST00000198634 321 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm44024-201ENSMUST00000203008 476 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm44666-201ENSMUST00000208544 391 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm30534-201ENSMUST00000217928 207 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Spata45-201ENSMUST00000077889 432 ntAPPRIS P1 TSL 2 BASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm22454-201ENSMUST00000082583 107 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm26126-201ENSMUST00000083188 164 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Zfp40-203ENSMUST00000140313 2754 ntTSL 1 (best) BASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Gm33962-201ENSMUST00000182643 2592 ntBASIC2.92□□□□□ -1.94
Sh3rf1Q69ZI1 Olfr1042-201ENSMUST00000099908 4119 ntAPPRIS P1 TSL 5 BASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Vmn1r46-206ENSMUST00000228401 10955 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Gm26074-201ENSMUST00000104063 129 ntBASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Gm13246-201ENSMUST00000120994 315 ntBASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Gm22221-201ENSMUST00000157362 103 ntBASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Gm24813-201ENSMUST00000175310 84 ntBASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Gm23246-201ENSMUST00000083371 67 ntBASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Mir7-1-201ENSMUST00000083500 108 ntBASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Vmn1r185-211ENSMUST00000228467 6915 ntAPPRIS P1 BASIC2.91□□□□□ -1.94
Sh3rf1Q69ZI1 Olfr143-202ENSMUST00000213129 3449 ntAPPRIS ALT2 TSL 5 BASIC2.9□□□□□ -1.94
Sh3rf1Q69ZI1 Gm36669-201ENSMUST00000201757 3650 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 n-R5s158-201ENSMUST00000104095 118 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm23015-201ENSMUST00000104145 128 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm25888-201ENSMUST00000157778 302 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm24958-201ENSMUST00000158009 97 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm22515-201ENSMUST00000158273 305 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Mir5123-201ENSMUST00000177794 83 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm26498-201ENSMUST00000177799 79 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm26230-201ENSMUST00000180141 79 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm26864-201ENSMUST00000181346 156 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm27582-201ENSMUST00000184084 126 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm28270-201ENSMUST00000188550 109 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm28328-201ENSMUST00000188869 109 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 AC125350.4-201ENSMUST00000225895 273 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Mir489-201ENSMUST00000093599 107 ntBASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Olfr790-203ENSMUST00000215067 2659 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Olfr786-202ENSMUST00000204529 2824 ntAPPRIS P1 TSL 3 BASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
Sh3rf1Q69ZI1 Gm43879-201ENSMUST00000203811 3760 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Wnk3-201ENSMUST00000096285 8551 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm14709-201ENSMUST00000121225 304 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm24559-201ENSMUST00000157519 121 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm25978-201ENSMUST00000158698 90 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm22011-201ENSMUST00000158790 123 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm24390-201ENSMUST00000179578 62 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm42716-203ENSMUST00000197140 259 ntTSL 3 BASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Mir7118-201ENSMUST00000197760 61 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm8935-201ENSMUST00000066794 2798 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm22306-201ENSMUST00000082692 107 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 n-R5s183-201ENSMUST00000083939 115 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Slitrk6-201ENSMUST00000078386 4240 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Ranbp2-201ENSMUST00000003310 9608 ntAPPRIS P1 TSL 5 BASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Gm37331-201ENSMUST00000192367 3375 ntBASIC2.89□□□□□ -1.95
Sh3rf1Q69ZI1 Cdk13-205ENSMUST00000222800 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
Retrieved 100 of 76,532 protein–RNA pairs in 202.4 ms